RNA–Protein interactions for RNA: ENST00000474438.1

CDH22-202, Transcript of cadherin 22, humanhuman

TSL 1 (best)

Gene CDH22, Length 1,640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22-202ENST00000474438 A0A0G2JS52 829 aa28.86■■■□□ 2.21
CDH22-202ENST00000474438 ONECUT3O60422 494 aaPredicted RBP28.86■■■□□ 2.21
CDH22-202ENST00000474438 MYT1Q01538 1121 aa28.86■■■□□ 2.21
CDH22-202ENST00000474438 TSPYL6Q8N831 410 aa28.86■■■□□ 2.21
CDH22-202ENST00000474438 TWISTNBQ3B726 338 aaPredicted RBP28.85■■■□□ 2.21
CDH22-202ENST00000474438 GLI3P10071 1580 aa28.85■■■□□ 2.21
CDH22-202ENST00000474438 ELL2O00472 640 aaPredicted RBP28.84■■■□□ 2.21
CDH22-202ENST00000474438 VAMP4O75379 141 aa28.84■■■□□ 2.21
CDH22-202ENST00000474438 MRC1P22897 1456 aa28.84■■■□□ 2.21
CDH22-202ENST00000474438 RARSP54136 660 aaKnown RBP28.83■■■□□ 2.21
CDH22-202ENST00000474438 MARCH10Q8NA82 808 aaPredicted RBP28.83■■■□□ 2.21
CDH22-202ENST00000474438 ZNF428Q96B54 188 aa28.83■■■□□ 2.21
CDH22-202ENST00000474438 VIRMAQ69YN4 1812 aaKnown RBP28.83■■■□□ 2.21
CDH22-202ENST00000474438 RNF123Q5XPI4 1314 aa28.83■■■□□ 2.21
CDH22-202ENST00000474438 KRT24Q2M2I5 525 aa28.82■■■□□ 2.2
CDH22-202ENST00000474438 KCNQ3O43525 872 aa28.8■■■□□ 2.2
CDH22-202ENST00000474438 EIF4A1P60842 406 aaKnown RBP28.8■■■□□ 2.2
CDH22-202ENST00000474438 BCAR3O75815 825 aa28.8■■■□□ 2.2
CDH22-202ENST00000474438 SIPA1L3O60292 1781 aaPredicted RBP28.79■■■□□ 2.2
CDH22-202ENST00000474438 ZNF790Q6PG37 636 aa28.79■■■□□ 2.2
CDH22-202ENST00000474438 THSD7AQ9UPZ6 1657 aa28.78■■■□□ 2.2
CDH22-202ENST00000474438 TMOD3Q9NYL9 352 aa28.78■■■□□ 2.2
CDH22-202ENST00000474438 SLC39A6Q13433 755 aa28.77■■■□□ 2.2
CDH22-202ENST00000474438 SEPT12Q8IYM1 358 aa28.77■■■□□ 2.2
CDH22-202ENST00000474438 SOS1Q07889 1333 aaPredicted RBP28.77■■■□□ 2.2
CDH22-202ENST00000474438 RRP1P56182 461 aaKnown RBP28.76■■■□□ 2.2
CDH22-202ENST00000474438 ALDH1L2Q3SY69 923 aa28.76■■■□□ 2.2
CDH22-202ENST00000474438 KDM3BQ7LBC6 1761 aa28.75■■■□□ 2.19
CDH22-202ENST00000474438 RBM6P78332 1123 aaKnown RBP28.75■■■□□ 2.19
CDH22-202ENST00000474438 TTC5Q8N0Z6 440 aa28.75■■■□□ 2.19
CDH22-202ENST00000474438 SSH1Q8WYL5 1049 aa28.75■■■□□ 2.19
CDH22-202ENST00000474438 BCL2L13Q9BXK5 485 aa28.74■■■□□ 2.19
CDH22-202ENST00000474438 NEFLP07196 543 aa28.73■■■□□ 2.19
CDH22-202ENST00000474438 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.73■■■□□ 2.19
CDH22-202ENST00000474438 PIGBQ92521 554 aa28.73■■■□□ 2.19
CDH22-202ENST00000474438 SMC4Q9NTJ3 1288 aa28.73■■■□□ 2.19
CDH22-202ENST00000474438 PRIM1P49642 420 aaKnown RBP28.72■■■□□ 2.19
CDH22-202ENST00000474438 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
CDH22-202ENST00000474438 HEG1Q9ULI3 1381 aa28.71■■■□□ 2.19
CDH22-202ENST00000474438 HOXB7P09629 217 aa28.71■■■□□ 2.19
CDH22-202ENST00000474438 PLIN1O60240 522 aa28.7■■■□□ 2.19
CDH22-202ENST00000474438 SYTL4Q96C24 671 aaPredicted RBP28.7■■■□□ 2.19
CDH22-202ENST00000474438 GIGYF1O75420 1035 aaPredicted RBP28.69■■■□□ 2.18
CDH22-202ENST00000474438 BCL9O00512 1426 aa28.69■■■□□ 2.18
CDH22-202ENST00000474438 ACSBG1Q96GR2 724 aa28.69■■■□□ 2.18
CDH22-202ENST00000474438 ZNF496Q96IT1 587 aaPredicted RBP28.69■■■□□ 2.18
CDH22-202ENST00000474438 FMNL2Q96PY5 1086 aa28.69■■■□□ 2.18
CDH22-202ENST00000474438 CHMP4AQ9BY43 222 aa28.69■■■□□ 2.18
CDH22-202ENST00000474438 RGS17Q9UGC6 210 aaPredicted RBP28.69■■■□□ 2.18
CDH22-202ENST00000474438 BRPF1P55201 1214 aaPredicted RBP28.68■■■□□ 2.18
CDH22-202ENST00000474438 RXRBP28702 533 aa28.67■■■□□ 2.18
CDH22-202ENST00000474438 CCDC30Q5VVM6 783 aa28.67■■■□□ 2.18
CDH22-202ENST00000474438 FRAT1Q92837 279 aaPredicted RBP28.67■■■□□ 2.18
CDH22-202ENST00000474438 TCERG1O14776 1098 aaKnown RBP28.66■■■□□ 2.18
CDH22-202ENST00000474438 MRPL50Q8N5N7 158 aaKnown RBP28.66■■■□□ 2.18
CDH22-202ENST00000474438 GTF3C3Q9Y5Q9 886 aa28.66■■■□□ 2.18
CDH22-202ENST00000474438 ATG3Q9NT62 314 aa28.65■■■□□ 2.18
CDH22-202ENST00000474438 ASAP1Q9ULH1 1129 aa28.65■■■□□ 2.18
CDH22-202ENST00000474438 IRX6P78412 446 aaPredicted RBP28.65■■■□□ 2.18
CDH22-202ENST00000474438 HDGFL1Q5TGJ6 251 aa28.65■■■□□ 2.18
CDH22-202ENST00000474438 CANXP27824 592 aaKnown RBP28.64■■■□□ 2.18
CDH22-202ENST00000474438 FKBP8Q14318 412 aa28.64■■■□□ 2.18
CDH22-202ENST00000474438 SNRPA1P09661 255 aaKnown RBP28.63■■■□□ 2.17
CDH22-202ENST00000474438 EIF2S2P20042 333 aaKnown RBP28.63■■■□□ 2.17
CDH22-202ENST00000474438 STK31Q9BXU1 1019 aa28.63■■■□□ 2.17
CDH22-202ENST00000474438 ITGB4P16144 1822 aa28.63■■■□□ 2.17
CDH22-202ENST00000474438 DOT1LQ8TEK3 1739 aa28.63■■■□□ 2.17
CDH22-202ENST00000474438 FAM182BQ5T319 152 aa28.62■■■□□ 2.17
CDH22-202ENST00000474438 NECTIN2Q92692 538 aa28.62■■■□□ 2.17
CDH22-202ENST00000474438 NOB1Q9ULX3 412 aaKnown RBP28.62■■■□□ 2.17
CDH22-202ENST00000474438 KIF16BQ96L93 1317 aa28.62■■■□□ 2.17
CDH22-202ENST00000474438 IPO8O15397 1037 aaKnown RBP28.61■■■□□ 2.17
CDH22-202ENST00000474438 PTCD1O75127 700 aaKnown RBP28.61■■■□□ 2.17
CDH22-202ENST00000474438 SLC4A2P04920 1241 aa28.61■■■□□ 2.17
CDH22-202ENST00000474438 KRT27Q7Z3Y8 459 aa28.61■■■□□ 2.17
CDH22-202ENST00000474438 PRAMEF22A3QJZ6 481 aa28.61■■■□□ 2.17
CDH22-202ENST00000474438 KCNQ2O43526 872 aa28.61■■■□□ 2.17
CDH22-202ENST00000474438 ZKSCAN2Q63HK3 967 aa28.61■■■□□ 2.17
CDH22-202ENST00000474438 POTEAQ6S8J7 498 aa28.6■■■□□ 2.17
CDH22-202ENST00000474438 PAPPAQ13219 1627 aa28.6■■■□□ 2.17
CDH22-202ENST00000474438 PDE3AQ14432 1141 aa28.58■■■□□ 2.17
CDH22-202ENST00000474438 KCPQ6ZWJ8 1503 aa28.57■■■□□ 2.16
CDH22-202ENST00000474438 C20orf194Q5TEA3 1177 aa28.57■■■□□ 2.16
CDH22-202ENST00000474438 ARHGAP45Q92619 1136 aa28.57■■■□□ 2.16
CDH22-202ENST00000474438 ATF7IPQ6VMQ6 1270 aa28.56■■■□□ 2.16
CDH22-202ENST00000474438 VSIG10Q8N0Z9 540 aa28.56■■■□□ 2.16
CDH22-202ENST00000474438 RBM42Q9BTD8 480 aaKnown RBP28.56■■■□□ 2.16
CDH22-202ENST00000474438 USP16Q9Y5T5 823 aa28.56■■■□□ 2.16
CDH22-202ENST00000474438 UBR2Q8IWV8 1755 aa28.55■■■□□ 2.16
CDH22-202ENST00000474438 KAT6BQ8WYB5 2073 aa28.55■■■□□ 2.16
CDH22-202ENST00000474438 MS4A1P11836 297 aa28.54■■■□□ 2.16
CDH22-202ENST00000474438 FAM196AQ6ZSG2 479 aa28.54■■■□□ 2.16
CDH22-202ENST00000474438 DBF4Q9UBU7 674 aaPredicted RBP28.54■■■□□ 2.16
CDH22-202ENST00000474438 SMARCC1Q92922 1105 aaPredicted RBP28.54■■■□□ 2.16
CDH22-202ENST00000474438 CHPF2Q9P2E5 772 aa28.54■■■□□ 2.16
CDH22-202ENST00000474438 TRIM27P14373 513 aa28.53■■■□□ 2.16
CDH22-202ENST00000474438 TEX13AQ9BXU3 409 aaPredicted RBP28.53■■■□□ 2.16
CDH22-202ENST00000474438 PTPRCP08575 1304 aa28.51■■■□□ 2.15
CDH22-202ENST00000474438 ERICH6BQ5W0A0 696 aa28.51■■■□□ 2.15
CDH22-202ENST00000474438 G2E3Q7L622 706 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms