RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 IL16Q14005 1332 aa10.86□□□□□ -0.67
CNN3-205ENST00000474409 E9PSI1 815 aa10.86□□□□□ -0.67
CNN3-205ENST00000474409 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
CNN3-205ENST00000474409 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
CNN3-205ENST00000474409 GNAI1P63096 354 aa10.85□□□□□ -0.67
CNN3-205ENST00000474409 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
CNN3-205ENST00000474409 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
CNN3-205ENST00000474409 LGR6Q9HBX8 967 aa10.85□□□□□ -0.67
CNN3-205ENST00000474409 IFT57Q9NWB7 429 aa10.85□□□□□ -0.67
CNN3-205ENST00000474409 RGS17Q9UGC6 210 aaPredicted RBP10.85□□□□□ -0.67
CNN3-205ENST00000474409 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
CNN3-205ENST00000474409 AFDNP55196 1824 aaKnown RBP10.84□□□□□ -0.67
CNN3-205ENST00000474409 ONECUT3O60422 494 aaPredicted RBP10.84□□□□□ -0.67
CNN3-205ENST00000474409 NKX1-1Q15270 411 aaPredicted RBP10.84□□□□□ -0.67
CNN3-205ENST00000474409 POTEAQ6S8J7 498 aa10.84□□□□□ -0.67
CNN3-205ENST00000474409 MARCH10Q8NA82 808 aaPredicted RBP10.84□□□□□ -0.67
CNN3-205ENST00000474409 CDCA7LQ96GN5 454 aa10.84□□□□□ -0.67
CNN3-205ENST00000474409 SLC52A2Q9HAB3 445 aa10.84□□□□□ -0.67
CNN3-205ENST00000474409 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
CNN3-205ENST00000474409 CABP4P57796 275 aa10.83□□□□□ -0.68
CNN3-205ENST00000474409 SLFN5Q08AF3 891 aa10.83□□□□□ -0.68
CNN3-205ENST00000474409 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
CNN3-205ENST00000474409 SYTL4Q96C24 671 aaPredicted RBP10.83□□□□□ -0.68
CNN3-205ENST00000474409 CFAP44Q96MT7 982 aa10.83□□□□□ -0.68
CNN3-205ENST00000474409 TSPYL4Q9UJ04 414 aa10.83□□□□□ -0.68
CNN3-205ENST00000474409 TUBGCP6Q96RT7 1819 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 BTBD11A6QL63 1104 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 KRT27Q7Z3Y8 459 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
CNN3-205ENST00000474409 MBIPQ9NS73 344 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 TMOD3Q9NYL9 352 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 BCL9O00512 1426 aa10.82□□□□□ -0.68
CNN3-205ENST00000474409 MYH14Q7Z406 1995 aaKnown RBP10.81□□□□□ -0.68
CNN3-205ENST00000474409 TAF7Q15545 349 aaPredicted RBP10.81□□□□□ -0.68
CNN3-205ENST00000474409 TTC5Q8N0Z6 440 aa10.81□□□□□ -0.68
CNN3-205ENST00000474409 ACSBG1Q96GR2 724 aa10.81□□□□□ -0.68
CNN3-205ENST00000474409 RREB1Q92766 1687 aa10.81□□□□□ -0.68
CNN3-205ENST00000474409 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 FAM182BQ5T319 152 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 DUSP27Q5VZP5 1158 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 NFATC2IPQ8NCF5 419 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 BABAM1Q9NWV8 329 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 MIS18AQ9NYP9 233 aa10.8□□□□□ -0.68
CNN3-205ENST00000474409 UBR3Q6ZT12 1888 aa10.79□□□□□ -0.68
CNN3-205ENST00000474409 NUP188Q5SRE5 1749 aa10.79□□□□□ -0.68
CNN3-205ENST00000474409 CHL1O00533 1208 aa10.79□□□□□ -0.68
CNN3-205ENST00000474409 NUP98P52948 1817 aa10.79□□□□□ -0.68
CNN3-205ENST00000474409 EP400Q96L91 3159 aa10.79□□□□□ -0.68
CNN3-205ENST00000474409 C4AP0C0L4 1744 aa10.78□□□□□ -0.68
CNN3-205ENST00000474409 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
CNN3-205ENST00000474409 BCORQ6W2J9 1755 aa10.78□□□□□ -0.68
CNN3-205ENST00000474409 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
CNN3-205ENST00000474409 EXOSC9Q06265 439 aaKnown RBP10.78□□□□□ -0.68
CNN3-205ENST00000474409 FAM196AQ6ZSG2 479 aa10.78□□□□□ -0.68
CNN3-205ENST00000474409 TRMT2AQ8IZ69 625 aaKnown RBP10.78□□□□□ -0.68
CNN3-205ENST00000474409 SLC39A6Q13433 755 aa10.77□□□□□ -0.69
CNN3-205ENST00000474409 ZNF790Q6PG37 636 aa10.77□□□□□ -0.69
CNN3-205ENST00000474409 PIGBQ92521 554 aa10.77□□□□□ -0.69
CNN3-205ENST00000474409 CASZ1Q86V15 1759 aa10.77□□□□□ -0.69
CNN3-205ENST00000474409 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
CNN3-205ENST00000474409 QSER1Q2KHR3 1735 aa10.76□□□□□ -0.69
CNN3-205ENST00000474409 TWISTNBQ3B726 338 aaPredicted RBP10.76□□□□□ -0.69
CNN3-205ENST00000474409 ELL2O00472 640 aaPredicted RBP10.75□□□□□ -0.69
CNN3-205ENST00000474409 KCNQ3O43525 872 aa10.75□□□□□ -0.69
CNN3-205ENST00000474409 KCNQ2O43526 872 aa10.75□□□□□ -0.69
CNN3-205ENST00000474409 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
CNN3-205ENST00000474409 KRT24Q2M2I5 525 aa10.75□□□□□ -0.69
CNN3-205ENST00000474409 FMNL2Q96PY5 1086 aa10.75□□□□□ -0.69
CNN3-205ENST00000474409 SCN7AQ01118 1682 aa10.75□□□□□ -0.69
CNN3-205ENST00000474409 HEG1Q9ULI3 1381 aa10.75□□□□□ -0.69
CNN3-205ENST00000474409 CT47B1P0C2W7 299 aaPredicted RBP10.74□□□□□ -0.69
CNN3-205ENST00000474409 SMARCC1Q92922 1105 aaPredicted RBP10.74□□□□□ -0.69
CNN3-205ENST00000474409 ZNF496Q96IT1 587 aaPredicted RBP10.74□□□□□ -0.69
CNN3-205ENST00000474409 ASAP1Q9ULH1 1129 aa10.74□□□□□ -0.69
CNN3-205ENST00000474409 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
CNN3-205ENST00000474409 PTCD1O75127 700 aaKnown RBP10.73□□□□□ -0.69
CNN3-205ENST00000474409 TRIM37O94972 964 aa10.73□□□□□ -0.69
CNN3-205ENST00000474409 TSPYL6Q8N831 410 aa10.73□□□□□ -0.69
CNN3-205ENST00000474409 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
CNN3-205ENST00000474409 RBM42Q9BTD8 480 aaKnown RBP10.73□□□□□ -0.69
CNN3-205ENST00000474409 ATG3Q9NT62 314 aa10.73□□□□□ -0.69
CNN3-205ENST00000474409 RCAN3Q9UKA8 241 aa10.73□□□□□ -0.69
CNN3-205ENST00000474409 MYH3P11055 1940 aa10.73□□□□□ -0.69
CNN3-205ENST00000474409 HOXB7P09629 217 aa10.72□□□□□ -0.69
CNN3-205ENST00000474409 BCL11BQ9C0K0 894 aaPredicted RBP10.72□□□□□ -0.69
CNN3-205ENST00000474409 GIGYF1O75420 1035 aaPredicted RBP10.71□□□□□ -0.69
CNN3-205ENST00000474409 SNRPA1P09661 255 aaKnown RBP10.71□□□□□ -0.69
CNN3-205ENST00000474409 HDGFL1Q5TGJ6 251 aa10.71□□□□□ -0.69
CNN3-205ENST00000474409 PTF1AQ7RTS3 328 aa10.71□□□□□ -0.69
CNN3-205ENST00000474409 ZNF428Q96B54 188 aa10.71□□□□□ -0.69
CNN3-205ENST00000474409 STK31Q9BXU1 1019 aa10.71□□□□□ -0.69
CNN3-205ENST00000474409 CHMP4AQ9BY43 222 aa10.71□□□□□ -0.69
CNN3-205ENST00000474409 SMC4Q9NTJ3 1288 aa10.71□□□□□ -0.69
CNN3-205ENST00000474409 PRAMEF22A3QJZ6 481 aa10.7□□□□□ -0.7
CNN3-205ENST00000474409 VAMP4O75379 141 aa10.7□□□□□ -0.7
CNN3-205ENST00000474409 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
CNN3-205ENST00000474409 CANXP27824 592 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms