RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 TEFQ10587 303 aa17.77■□□□□ 0.44
LDLRAP1-204ENST00000474283 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
LDLRAP1-204ENST00000474283 LAS1LQ9Y4W2 734 aaKnown RBP17.77■□□□□ 0.44
LDLRAP1-204ENST00000474283 CABP4P57796 275 aa17.76■□□□□ 0.43
LDLRAP1-204ENST00000474283 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
LDLRAP1-204ENST00000474283 SYTL4Q96C24 671 aaPredicted RBP17.76■□□□□ 0.43
LDLRAP1-204ENST00000474283 CEMIPQ8WUJ3 1361 aa17.76■□□□□ 0.43
LDLRAP1-204ENST00000474283 MRC1P22897 1456 aa17.75■□□□□ 0.43
LDLRAP1-204ENST00000474283 IL16Q14005 1332 aa17.75■□□□□ 0.43
LDLRAP1-204ENST00000474283 PAPPAQ13219 1627 aa17.74■□□□□ 0.43
LDLRAP1-204ENST00000474283 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
LDLRAP1-204ENST00000474283 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.433e-8■■■□□ 14.7
LDLRAP1-204ENST00000474283 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
LDLRAP1-204ENST00000474283 EP400Q96L91 3159 aa17.74■□□□□ 0.43
LDLRAP1-204ENST00000474283 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
LDLRAP1-204ENST00000474283 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
LDLRAP1-204ENST00000474283 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
LDLRAP1-204ENST00000474283 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
LDLRAP1-204ENST00000474283 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
LDLRAP1-204ENST00000474283 UBR2Q8IWV8 1755 aa17.72■□□□□ 0.43
LDLRAP1-204ENST00000474283 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
LDLRAP1-204ENST00000474283 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
LDLRAP1-204ENST00000474283 FAM196AQ6ZSG2 479 aa17.72■□□□□ 0.43
LDLRAP1-204ENST00000474283 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
LDLRAP1-204ENST00000474283 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.43
LDLRAP1-204ENST00000474283 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
LDLRAP1-204ENST00000474283 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
LDLRAP1-204ENST00000474283 KCNQ2O43526 872 aa17.7■□□□□ 0.42
LDLRAP1-204ENST00000474283 BCL9O00512 1426 aa17.7■□□□□ 0.42
LDLRAP1-204ENST00000474283 GNAI1P63096 354 aa17.69■□□□□ 0.42
LDLRAP1-204ENST00000474283 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
LDLRAP1-204ENST00000474283 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
LDLRAP1-204ENST00000474283 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
LDLRAP1-204ENST00000474283 PIGBQ92521 554 aa17.68■□□□□ 0.42
LDLRAP1-204ENST00000474283 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
LDLRAP1-204ENST00000474283 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
LDLRAP1-204ENST00000474283 C5P01031 1676 aa17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 LY75O60449 1722 aa17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 TRIM37O94972 964 aa17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 FKBP8Q14318 412 aa17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 TSR2Q969E8 191 aaKnown RBP17.67■□□□□ 0.42
LDLRAP1-204ENST00000474283 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
LDLRAP1-204ENST00000474283 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
LDLRAP1-204ENST00000474283 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
LDLRAP1-204ENST00000474283 CHL1O00533 1208 aa17.65■□□□□ 0.42
LDLRAP1-204ENST00000474283 ZNF853P0CG23 659 aa17.65■□□□□ 0.42
LDLRAP1-204ENST00000474283 TTC5Q8N0Z6 440 aa17.65■□□□□ 0.42
LDLRAP1-204ENST00000474283 ZNF428Q96B54 188 aa17.65■□□□□ 0.42
LDLRAP1-204ENST00000474283 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
LDLRAP1-204ENST00000474283 LAMB4A4D0S4 1761 aa17.65■□□□□ 0.42
LDLRAP1-204ENST00000474283 TAF1LQ8IZX4 1826 aa17.64■□□□□ 0.41
LDLRAP1-204ENST00000474283 KCNQ3O43525 872 aa17.64■□□□□ 0.41
LDLRAP1-204ENST00000474283 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
LDLRAP1-204ENST00000474283 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
LDLRAP1-204ENST00000474283 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
LDLRAP1-204ENST00000474283 FANCIQ9NVI1 1328 aa17.64■□□□□ 0.41
LDLRAP1-204ENST00000474283 CACNA1FO60840 1977 aa17.63■□□□□ 0.41
LDLRAP1-204ENST00000474283 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
LDLRAP1-204ENST00000474283 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
LDLRAP1-204ENST00000474283 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
LDLRAP1-204ENST00000474283 TJP1Q07157 1748 aa17.62■□□□□ 0.41
LDLRAP1-204ENST00000474283 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
LDLRAP1-204ENST00000474283 MS4A1P11836 297 aa17.61■□□□□ 0.41
LDLRAP1-204ENST00000474283 RRP1P56182 461 aaKnown RBP17.61■□□□□ 0.41
LDLRAP1-204ENST00000474283 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
LDLRAP1-204ENST00000474283 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
LDLRAP1-204ENST00000474283 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
LDLRAP1-204ENST00000474283 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
LDLRAP1-204ENST00000474283 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
LDLRAP1-204ENST00000474283 PALLDQ8WX93 1383 aa17.6■□□□□ 0.41
LDLRAP1-204ENST00000474283 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
LDLRAP1-204ENST00000474283 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
LDLRAP1-204ENST00000474283 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
LDLRAP1-204ENST00000474283 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
LDLRAP1-204ENST00000474283 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
LDLRAP1-204ENST00000474283 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
LDLRAP1-204ENST00000474283 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.4
LDLRAP1-204ENST00000474283 APBA3O96018 575 aa17.58■□□□□ 0.4
LDLRAP1-204ENST00000474283 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-204ENST00000474283 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.4
LDLRAP1-204ENST00000474283 SF3B2Q13435 895 aaKnown RBP17.57■□□□□ 0.4
LDLRAP1-204ENST00000474283 CICQ96RK0 1608 aaPredicted RBP17.57■□□□□ 0.4
LDLRAP1-204ENST00000474283 HEG1Q9ULI3 1381 aa17.56■□□□□ 0.4
LDLRAP1-204ENST00000474283 C8orf58Q8NAV2 365 aa17.56■□□□□ 0.4
LDLRAP1-204ENST00000474283 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
LDLRAP1-204ENST00000474283 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
LDLRAP1-204ENST00000474283 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
LDLRAP1-204ENST00000474283 SIK1P57059 783 aa17.54■□□□□ 0.4
LDLRAP1-204ENST00000474283 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
LDLRAP1-204ENST00000474283 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
LDLRAP1-204ENST00000474283 SOS1Q07889 1333 aaPredicted RBP17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 RREB1Q92766 1687 aa17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 PRAMEF22A3QJZ6 481 aa17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 AAMPQ13685 434 aa17.53■□□□□ 0.4
LDLRAP1-204ENST00000474283 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms