RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
PLXNB1-213ENST00000473996 YY1P25490 414 aa20.07■□□□□ 0.8
PLXNB1-213ENST00000473996 POLD1P28340 1107 aa20.07■□□□□ 0.8
PLXNB1-213ENST00000473996 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
PLXNB1-213ENST00000473996 MTHFSDQ2M296 383 aaKnown RBP20.06■□□□□ 0.8
PLXNB1-213ENST00000473996 AKAP4Q5JQC9 854 aa20.06■□□□□ 0.8
PLXNB1-213ENST00000473996 PIGBQ92521 554 aa20.06■□□□□ 0.8
PLXNB1-213ENST00000473996 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
PLXNB1-213ENST00000473996 RSPH6AQ9H0K4 717 aa20.05■□□□□ 0.8
PLXNB1-213ENST00000473996 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
PLXNB1-213ENST00000473996 ANP32CO43423 234 aa20.04■□□□□ 0.8
PLXNB1-213ENST00000473996 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
PLXNB1-213ENST00000473996 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
PLXNB1-213ENST00000473996 TMOD3Q9NYL9 352 aa20.04■□□□□ 0.8
PLXNB1-213ENST00000473996 NEFMP07197 916 aa20.03■□□□□ 0.8
PLXNB1-213ENST00000473996 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
PLXNB1-213ENST00000473996 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
PLXNB1-213ENST00000473996 MSH5O43196 834 aa20.02■□□□□ 0.8
PLXNB1-213ENST00000473996 CABP4P57796 275 aa20.02■□□□□ 0.8
PLXNB1-213ENST00000473996 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
PLXNB1-213ENST00000473996 FLAD1Q8NFF5 587 aa20.01■□□□□ 0.79
PLXNB1-213ENST00000473996 UBR3Q6ZT12 1888 aa19.99■□□□□ 0.79
PLXNB1-213ENST00000473996 GOLGB1Q14789 3259 aaKnown RBP19.99■□□□□ 0.79
PLXNB1-213ENST00000473996 LOC102724428A0A0B4J2F2 783 aa19.99■□□□□ 0.79
PLXNB1-213ENST00000473996 SIK1P57059 783 aa19.99■□□□□ 0.79
PLXNB1-213ENST00000473996 AK7Q96M32 723 aa19.99■□□□□ 0.79
PLXNB1-213ENST00000473996 CHD4Q14839 1912 aa19.98■□□□□ 0.79
PLXNB1-213ENST00000473996 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
PLXNB1-213ENST00000473996 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
PLXNB1-213ENST00000473996 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
PLXNB1-213ENST00000473996 ASAP1Q9ULH1 1129 aa19.98■□□□□ 0.79
PLXNB1-213ENST00000473996 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
PLXNB1-213ENST00000473996 KLHL34Q8N239 644 aa19.97■□□□□ 0.79
PLXNB1-213ENST00000473996 NFATC2IPQ8NCF5 419 aa19.97■□□□□ 0.79
PLXNB1-213ENST00000473996 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
PLXNB1-213ENST00000473996 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
PLXNB1-213ENST00000473996 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
PLXNB1-213ENST00000473996 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
PLXNB1-213ENST00000473996 PLEKHF1Q96S99 279 aa19.94■□□□□ 0.78
PLXNB1-213ENST00000473996 SLC52A2Q9HAB3 445 aa19.94■□□□□ 0.78
PLXNB1-213ENST00000473996 KDM6AO15550 1401 aaPredicted RBP19.93■□□□□ 0.78
PLXNB1-213ENST00000473996 SSFA2P28290 1259 aa19.93■□□□□ 0.78
PLXNB1-213ENST00000473996 ATP6V1AP38606 617 aa19.93■□□□□ 0.78
PLXNB1-213ENST00000473996 AMIGO3Q86WK7 504 aa19.93■□□□□ 0.78
PLXNB1-213ENST00000473996 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
PLXNB1-213ENST00000473996 ZNF831Q5JPB2 1677 aa19.92■□□□□ 0.78
PLXNB1-213ENST00000473996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.92■□□□□ 0.78
PLXNB1-213ENST00000473996 ITPK1Q13572 414 aa19.92■□□□□ 0.78
PLXNB1-213ENST00000473996 GPR162Q16538 588 aa19.92■□□□□ 0.78
PLXNB1-213ENST00000473996 IL17REQ8NFR9 667 aa19.92■□□□□ 0.78
PLXNB1-213ENST00000473996 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
PLXNB1-213ENST00000473996 HTATSF1O43719 755 aaKnown RBP19.91■□□□□ 0.78
PLXNB1-213ENST00000473996 PHF14O94880 888 aa19.91■□□□□ 0.78
PLXNB1-213ENST00000473996 TEFQ10587 303 aa19.91■□□□□ 0.78
PLXNB1-213ENST00000473996 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
PLXNB1-213ENST00000473996 GNPATO15228 680 aa19.89■□□□□ 0.77
PLXNB1-213ENST00000473996 NFE2L2Q16236 605 aa19.89■□□□□ 0.77
PLXNB1-213ENST00000473996 RBM42Q9BTD8 480 aaKnown RBP19.89■□□□□ 0.77
PLXNB1-213ENST00000473996 SMIM5Q71RC9 77 aa19.88■□□□□ 0.77
PLXNB1-213ENST00000473996 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
PLXNB1-213ENST00000473996 SCN11AQ9UI33 1791 aa19.88■□□□□ 0.77
PLXNB1-213ENST00000473996 CCDC184Q52MB2 194 aa19.87■□□□□ 0.77
PLXNB1-213ENST00000473996 SLC4A9Q96Q91 983 aa19.87■□□□□ 0.77
PLXNB1-213ENST00000473996 MRS2Q9HD23 443 aa19.87■□□□□ 0.77
PLXNB1-213ENST00000473996 CD2APQ9Y5K6 639 aa19.87■□□□□ 0.77
PLXNB1-213ENST00000473996 COL5A3P25940 1745 aaPredicted RBP19.86■□□□□ 0.77
PLXNB1-213ENST00000473996 MCM10Q7L590 875 aa19.86■□□□□ 0.77
PLXNB1-213ENST00000473996 CCDC146Q8IYE0 955 aa19.86■□□□□ 0.77
PLXNB1-213ENST00000473996 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
PLXNB1-213ENST00000473996 PTCD1O75127 700 aaKnown RBP19.85■□□□□ 0.77
PLXNB1-213ENST00000473996 RIPK4P57078 832 aa19.85■□□□□ 0.77
PLXNB1-213ENST00000473996 SLC39A6Q13433 755 aa19.85■□□□□ 0.77
PLXNB1-213ENST00000473996 DCTN1Q14203 1278 aa19.84■□□□□ 0.77
PLXNB1-213ENST00000473996 RC3H1Q5TC82 1133 aaKnown RBP19.84■□□□□ 0.77
PLXNB1-213ENST00000473996 ZNF784Q8NCA9 323 aaPredicted RBP19.84■□□□□ 0.77
PLXNB1-213ENST00000473996 RTCBQ9Y3I0 505 aaKnown RBP19.84■□□□□ 0.77
PLXNB1-213ENST00000473996 CNTNAP4Q9C0A0 1308 aa19.83■□□□□ 0.77
PLXNB1-213ENST00000473996 MYH14Q7Z406 1995 aaKnown RBP19.83■□□□□ 0.77
PLXNB1-213ENST00000473996 TMPOP42166 694 aaKnown RBP19.83■□□□□ 0.77
PLXNB1-213ENST00000473996 TTC5Q8N0Z6 440 aa19.83■□□□□ 0.77
PLXNB1-213ENST00000473996 VIRMAQ69YN4 1812 aaKnown RBP19.83■□□□□ 0.76
PLXNB1-213ENST00000473996 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.76
PLXNB1-213ENST00000473996 BTBD11A6QL63 1104 aa19.82■□□□□ 0.76
PLXNB1-213ENST00000473996 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
PLXNB1-213ENST00000473996 GRIN3BO60391 1043 aa19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 ADRA2BP18089 450 aa19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 LMOD3Q0VAK6 560 aa19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 TRAPPC3LQ5T215 181 aa19.81■□□□□ 0.76
PLXNB1-213ENST00000473996 RPS6KA4O75676 772 aa19.8■□□□□ 0.76
PLXNB1-213ENST00000473996 ZNF790Q6PG37 636 aa19.8■□□□□ 0.76
PLXNB1-213ENST00000473996 RRP7AQ9Y3A4 280 aaKnown RBP19.8■□□□□ 0.76
PLXNB1-213ENST00000473996 CICQ96RK0 1608 aaPredicted RBP19.8■□□□□ 0.76
PLXNB1-213ENST00000473996 MRC1P22897 1456 aa19.79■□□□□ 0.76
PLXNB1-213ENST00000473996 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
PLXNB1-213ENST00000473996 ARHGEF1Q92888 912 aaKnown RBP19.78■□□□□ 0.76
PLXNB1-213ENST00000473996 TJP1Q07157 1748 aa19.77■□□□□ 0.76
PLXNB1-213ENST00000473996 MMP10P09238 476 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms