RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
TRAIP-204ENST00000473863 UBR2Q8IWV8 1755 aa17.43■□□□□ 0.38
TRAIP-204ENST00000473863 ERVV-2B6SEH9 535 aa17.43■□□□□ 0.38
TRAIP-204ENST00000473863 GNAI1P63096 354 aa17.43■□□□□ 0.38
TRAIP-204ENST00000473863 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
TRAIP-204ENST00000473863 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
TRAIP-204ENST00000473863 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
TRAIP-204ENST00000473863 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
TRAIP-204ENST00000473863 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
TRAIP-204ENST00000473863 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
TRAIP-204ENST00000473863 MYH16Q9H6N6 1097 aa17.42■□□□□ 0.38
TRAIP-204ENST00000473863 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
TRAIP-204ENST00000473863 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
TRAIP-204ENST00000473863 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
TRAIP-204ENST00000473863 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
TRAIP-204ENST00000473863 FANCIQ9NVI1 1328 aa17.41■□□□□ 0.38
TRAIP-204ENST00000473863 CHL1O00533 1208 aa17.4■□□□□ 0.38
TRAIP-204ENST00000473863 TEFQ10587 303 aa17.4■□□□□ 0.38
TRAIP-204ENST00000473863 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
TRAIP-204ENST00000473863 A0A0G2JS52 829 aa17.39■□□□□ 0.37
TRAIP-204ENST00000473863 MYT1Q01538 1121 aa17.39■□□□□ 0.37
TRAIP-204ENST00000473863 TAF7Q15545 349 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-204ENST00000473863 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.37
TRAIP-204ENST00000473863 SF3B2Q13435 895 aaKnown RBP17.37■□□□□ 0.37
TRAIP-204ENST00000473863 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
TRAIP-204ENST00000473863 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
TRAIP-204ENST00000473863 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
TRAIP-204ENST00000473863 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
TRAIP-204ENST00000473863 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
TRAIP-204ENST00000473863 LAMB4A4D0S4 1761 aa17.35■□□□□ 0.37
TRAIP-204ENST00000473863 CT47B1P0C2W7 299 aaPredicted RBP17.35■□□□□ 0.37
TRAIP-204ENST00000473863 CABP4P57796 275 aa17.35■□□□□ 0.37
TRAIP-204ENST00000473863 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
TRAIP-204ENST00000473863 BTAF1O14981 1849 aa17.35■□□□□ 0.37
TRAIP-204ENST00000473863 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
TRAIP-204ENST00000473863 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-204ENST00000473863 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
TRAIP-204ENST00000473863 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
TRAIP-204ENST00000473863 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
TRAIP-204ENST00000473863 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
TRAIP-204ENST00000473863 C5P01031 1676 aa17.32■□□□□ 0.36
TRAIP-204ENST00000473863 LAS1LQ9Y4W2 734 aaKnown RBP17.32■□□□□ 0.36
TRAIP-204ENST00000473863 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
TRAIP-204ENST00000473863 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
TRAIP-204ENST00000473863 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
TRAIP-204ENST00000473863 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
TRAIP-204ENST00000473863 HOXB7P09629 217 aa17.3■□□□□ 0.36
TRAIP-204ENST00000473863 FAM196AQ6ZSG2 479 aa17.3■□□□□ 0.36
TRAIP-204ENST00000473863 PIGBQ92521 554 aa17.3■□□□□ 0.36
TRAIP-204ENST00000473863 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
TRAIP-204ENST00000473863 LY75O60449 1722 aa17.3■□□□□ 0.36
TRAIP-204ENST00000473863 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
TRAIP-204ENST00000473863 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
TRAIP-204ENST00000473863 EIF4A1P60842 406 aaKnown RBP17.29■□□□□ 0.36
TRAIP-204ENST00000473863 EXOSC9Q06265 439 aaKnown RBP17.29■□□□□ 0.36
TRAIP-204ENST00000473863 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
TRAIP-204ENST00000473863 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
TRAIP-204ENST00000473863 TJP1Q07157 1748 aa17.28■□□□□ 0.36
TRAIP-204ENST00000473863 TTC5Q8N0Z6 440 aa17.28■□□□□ 0.36
TRAIP-204ENST00000473863 R3HDM1Q15032 1099 aaKnown RBP17.26■□□□□ 0.35
TRAIP-204ENST00000473863 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
TRAIP-204ENST00000473863 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
TRAIP-204ENST00000473863 COL5A3P25940 1745 aaPredicted RBP17.26■□□□□ 0.35
TRAIP-204ENST00000473863 KCNQ3O43525 872 aa17.25■□□□□ 0.35
TRAIP-204ENST00000473863 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
TRAIP-204ENST00000473863 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-204ENST00000473863 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
TRAIP-204ENST00000473863 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
TRAIP-204ENST00000473863 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-204ENST00000473863 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
TRAIP-204ENST00000473863 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
TRAIP-204ENST00000473863 RREB1Q92766 1687 aa17.24■□□□□ 0.35
TRAIP-204ENST00000473863 KCNQ2O43526 872 aa17.24■□□□□ 0.35
TRAIP-204ENST00000473863 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
TRAIP-204ENST00000473863 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
TRAIP-204ENST00000473863 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-204ENST00000473863 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
TRAIP-204ENST00000473863 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
TRAIP-204ENST00000473863 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
TRAIP-204ENST00000473863 VAMP4O75379 141 aa17.23■□□□□ 0.35
TRAIP-204ENST00000473863 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
TRAIP-204ENST00000473863 BAG6P46379 1132 aa17.23■□□□□ 0.35
TRAIP-204ENST00000473863 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
TRAIP-204ENST00000473863 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
TRAIP-204ENST00000473863 ASAP1Q9ULH1 1129 aa17.23■□□□□ 0.35
TRAIP-204ENST00000473863 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
TRAIP-204ENST00000473863 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
TRAIP-204ENST00000473863 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
TRAIP-204ENST00000473863 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
TRAIP-204ENST00000473863 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-204ENST00000473863 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
TRAIP-204ENST00000473863 RNF123Q5XPI4 1314 aa17.19■□□□□ 0.34
TRAIP-204ENST00000473863 ZNF784Q8NCA9 323 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-204ENST00000473863 TEX13AQ9BXU3 409 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-204ENST00000473863 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
TRAIP-204ENST00000473863 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
TRAIP-204ENST00000473863 SIK1P57059 783 aa17.17■□□□□ 0.34
TRAIP-204ENST00000473863 EN1Q05925 392 aaPredicted RBP17.17■□□□□ 0.34
TRAIP-204ENST00000473863 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
TRAIP-204ENST00000473863 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms