RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 CD163L1Q9NR16 1453 aa16.01■□□□□ 0.15
MACF1-215ENST00000473843 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
MACF1-215ENST00000473843 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
MACF1-215ENST00000473843 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
MACF1-215ENST00000473843 DPEP1P16444 411 aa15.98■□□□□ 0.15
MACF1-215ENST00000473843 EDC4Q6P2E9 1401 aaKnown RBP15.98■□□□□ 0.15
MACF1-215ENST00000473843 MPRIPQ6WCQ1 1025 aa15.98■□□□□ 0.15
MACF1-215ENST00000473843 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
MACF1-215ENST00000473843 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
MACF1-215ENST00000473843 ABCB7O75027 752 aa15.96■□□□□ 0.15
MACF1-215ENST00000473843 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
MACF1-215ENST00000473843 PRDM10Q9NQV6 1147 aa15.96■□□□□ 0.15
MACF1-215ENST00000473843 CCDC87Q9NVE4 849 aa15.96■□□□□ 0.15
MACF1-215ENST00000473843 GNPATO15228 680 aa15.95■□□□□ 0.14
MACF1-215ENST00000473843 HOXC9P31274 260 aa15.95■□□□□ 0.14
MACF1-215ENST00000473843 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
MACF1-215ENST00000473843 DCAF5Q96JK2 942 aa15.95■□□□□ 0.14
MACF1-215ENST00000473843 ZC3H4Q9UPT8 1303 aaKnown RBP15.94■□□□□ 0.14
MACF1-215ENST00000473843 RAPGEF4Q8WZA2 1011 aa15.94■□□□□ 0.14
MACF1-215ENST00000473843 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
MACF1-215ENST00000473843 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
MACF1-215ENST00000473843 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
MACF1-215ENST00000473843 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
MACF1-215ENST00000473843 PDE4DIPQ5VU43 2346 aa15.93■□□□□ 0.14
MACF1-215ENST00000473843 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 TIAM2Q8IVF5 1701 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 FOXN1O15353 648 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 TATP17735 454 aaPredicted RBP15.92■□□□□ 0.14
MACF1-215ENST00000473843 KCNA3P22001 575 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 AMPHP49418 695 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 SIK1P57059 783 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 PIM2Q9P1W9 311 aa15.92■□□□□ 0.14
MACF1-215ENST00000473843 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
MACF1-215ENST00000473843 TMF1P82094 1093 aa15.91■□□□□ 0.14
MACF1-215ENST00000473843 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
MACF1-215ENST00000473843 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
MACF1-215ENST00000473843 DALRD3Q5D0E6 543 aaKnown RBP15.9■□□□□ 0.14
MACF1-215ENST00000473843 USHBP1Q8N6Y0 703 aa15.9■□□□□ 0.14
MACF1-215ENST00000473843 PIGBQ92521 554 aa15.9■□□□□ 0.14
MACF1-215ENST00000473843 SMG6Q86US8 1419 aaKnown RBP15.9■□□□□ 0.14
MACF1-215ENST00000473843 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
MACF1-215ENST00000473843 PARP3Q9Y6F1 533 aa15.89■□□□□ 0.13
MACF1-215ENST00000473843 A0A1W2PP64 1363 aa15.88■□□□□ 0.13
MACF1-215ENST00000473843 CYP27B1O15528 508 aa15.88■□□□□ 0.13
MACF1-215ENST00000473843 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
MACF1-215ENST00000473843 ITPK1Q13572 414 aa15.88■□□□□ 0.13
MACF1-215ENST00000473843 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
MACF1-215ENST00000473843 VIRMAQ69YN4 1812 aaKnown RBP15.87■□□□□ 0.13
MACF1-215ENST00000473843 ZNF831Q5JPB2 1677 aa15.87■□□□□ 0.13
MACF1-215ENST00000473843 GLTPD2A6NH11 291 aa15.87■□□□□ 0.13
MACF1-215ENST00000473843 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
MACF1-215ENST00000473843 TERF2IPQ9NYB0 399 aa15.87■□□□□ 0.13
MACF1-215ENST00000473843 MKRN1Q9UHC7 482 aaKnown RBP15.87■□□□□ 0.13
MACF1-215ENST00000473843 COL5A3P25940 1745 aaPredicted RBP15.87■□□□□ 0.13
MACF1-215ENST00000473843 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
MACF1-215ENST00000473843 TRAPPC3LQ5T215 181 aa15.86■□□□□ 0.13
MACF1-215ENST00000473843 AIDAQ96BJ3 306 aa15.86■□□□□ 0.13
MACF1-215ENST00000473843 ABHD8Q96I13 439 aa15.86■□□□□ 0.13
MACF1-215ENST00000473843 COG3Q96JB2 828 aa15.86■□□□□ 0.13
MACF1-215ENST00000473843 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
MACF1-215ENST00000473843 ROCK2O75116 1388 aaKnown RBP15.86■□□□□ 0.13
MACF1-215ENST00000473843 GYS1P13807 737 aa15.85■□□□□ 0.13
MACF1-215ENST00000473843 MLLT1Q03111 559 aaPredicted RBP15.85■□□□□ 0.13
MACF1-215ENST00000473843 POLA2Q14181 598 aa15.85■□□□□ 0.13
MACF1-215ENST00000473843 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
MACF1-215ENST00000473843 CNTNAP1P78357 1384 aa15.84■□□□□ 0.13
MACF1-215ENST00000473843 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
MACF1-215ENST00000473843 FBLN1P23142 703 aa15.83■□□□□ 0.12
MACF1-215ENST00000473843 RASSF7Q02833 373 aa15.83■□□□□ 0.12
MACF1-215ENST00000473843 DICER1Q9UPY3 1922 aaKnown RBP15.83■□□□□ 0.12
MACF1-215ENST00000473843 DLEC1Q9Y238 1755 aa15.82■□□□□ 0.12
MACF1-215ENST00000473843 LMNB1P20700 586 aa15.82■□□□□ 0.12
MACF1-215ENST00000473843 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
MACF1-215ENST00000473843 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
MACF1-215ENST00000473843 TMOD3Q9NYL9 352 aa15.82■□□□□ 0.12
MACF1-215ENST00000473843 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
MACF1-215ENST00000473843 KDRP35968 1356 aa15.82■□□□□ 0.12
MACF1-215ENST00000473843 RFC4P35249 363 aa15.81■□□□□ 0.12
MACF1-215ENST00000473843 CHRNA5P30532 468 aa15.8■□□□□ 0.12
MACF1-215ENST00000473843 RGS19P49795 217 aa15.8■□□□□ 0.12
MACF1-215ENST00000473843 LBX1P52954 281 aa15.8■□□□□ 0.12
MACF1-215ENST00000473843 INSRP06213 1382 aa15.79■□□□□ 0.12
MACF1-215ENST00000473843 POTECB2RU33 542 aa15.79■□□□□ 0.12
MACF1-215ENST00000473843 RRS1Q15050 365 aaKnown RBP15.79■□□□□ 0.12
MACF1-215ENST00000473843 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
MACF1-215ENST00000473843 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
MACF1-215ENST00000473843 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
MACF1-215ENST00000473843 WBP1LQ9NX94 342 aa15.78■□□□□ 0.12
MACF1-215ENST00000473843 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
MACF1-215ENST00000473843 L3MBTL2Q969R5 705 aa15.77■□□□□ 0.12
MACF1-215ENST00000473843 ATG3Q9NT62 314 aa15.77■□□□□ 0.12
MACF1-215ENST00000473843 AFDNP55196 1824 aaKnown RBP15.77■□□□□ 0.11
MACF1-215ENST00000473843 NCAPD2Q15021 1401 aa15.77■□□□□ 0.11
MACF1-215ENST00000473843 DDR1Q08345 913 aa15.76■□□□□ 0.11
MACF1-215ENST00000473843 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
MACF1-215ENST00000473843 FLT4P35916 1363 aa15.75■□□□□ 0.11
MACF1-215ENST00000473843 HSPA8P11142 646 aaKnown RBP15.75■□□□□ 0.11
MACF1-215ENST00000473843 VEGFBP49765 207 aa15.75■□□□□ 0.11
MACF1-215ENST00000473843 DPY19L2Q6NUT2 758 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms