RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 SLC4A9Q96Q91 983 aa23.48■■□□□ 1.35
RPUSD3-214ENST00000473522 CEMIPQ8WUJ3 1361 aa23.48■■□□□ 1.35
RPUSD3-214ENST00000473522 SRCAPQ6ZRS2 3230 aa23.47■■□□□ 1.35
RPUSD3-214ENST00000473522 ADAMTS8Q9UP79 889 aa23.47■■□□□ 1.35
RPUSD3-214ENST00000473522 ATP6V1AP38606 617 aa23.46■■□□□ 1.35
RPUSD3-214ENST00000473522 ITPK1Q13572 414 aa23.45■■□□□ 1.34
RPUSD3-214ENST00000473522 NFE2L2Q16236 605 aa23.45■■□□□ 1.34
RPUSD3-214ENST00000473522 PDGFDQ9GZP0 370 aaPredicted RBP23.45■■□□□ 1.34
RPUSD3-214ENST00000473522 TEFQ10587 303 aa23.44■■□□□ 1.34
RPUSD3-214ENST00000473522 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
RPUSD3-214ENST00000473522 RTF1Q92541 710 aaKnown RBP23.44■■□□□ 1.34
RPUSD3-214ENST00000473522 TFCP2L1Q9NZI6 479 aa23.44■■□□□ 1.34
RPUSD3-214ENST00000473522 CCDC184Q52MB2 194 aa23.43■■□□□ 1.34
RPUSD3-214ENST00000473522 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
RPUSD3-214ENST00000473522 KAT6BQ8WYB5 2073 aa23.43■■□□□ 1.34
RPUSD3-214ENST00000473522 MRC1P22897 1456 aa23.43■■□□□ 1.34
RPUSD3-214ENST00000473522 MAPK8IP3Q9UPT6 1336 aa23.42■■□□□ 1.34
RPUSD3-214ENST00000473522 PAPPAQ13219 1627 aa23.42■■□□□ 1.34
RPUSD3-214ENST00000473522 PTCD1O75127 700 aaKnown RBP23.42■■□□□ 1.34
RPUSD3-214ENST00000473522 SLC39A6Q13433 755 aa23.42■■□□□ 1.34
RPUSD3-214ENST00000473522 LINC00116Q8NCU8 138 aa23.42■■□□□ 1.34
RPUSD3-214ENST00000473522 MCM10Q7L590 875 aa23.41■■□□□ 1.34
RPUSD3-214ENST00000473522 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
RPUSD3-214ENST00000473522 LY75O60449 1722 aa23.41■■□□□ 1.34
RPUSD3-214ENST00000473522 ADAMTS7Q9UKP4 1686 aa23.41■■□□□ 1.34
RPUSD3-214ENST00000473522 PNPLA7Q6ZV29 1317 aa23.4■■□□□ 1.34
RPUSD3-214ENST00000473522 RC3H1Q5TC82 1133 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-214ENST00000473522 ITGB4P16144 1822 aa23.4■■□□□ 1.34
RPUSD3-214ENST00000473522 DCTN1Q14203 1278 aa23.39■■□□□ 1.33
RPUSD3-214ENST00000473522 SLC16A10Q8TF71 515 aa23.39■■□□□ 1.33
RPUSD3-214ENST00000473522 TMPOP42166 694 aaKnown RBP23.38■■□□□ 1.33
RPUSD3-214ENST00000473522 ZNF790Q6PG37 636 aa23.38■■□□□ 1.33
RPUSD3-214ENST00000473522 VSIG10Q8N0Z9 540 aa23.38■■□□□ 1.33
RPUSD3-214ENST00000473522 FLAD1Q8NFF5 587 aa23.38■■□□□ 1.33
RPUSD3-214ENST00000473522 PNISRQ8TF01 805 aaKnown RBP23.38■■□□□ 1.33
RPUSD3-214ENST00000473522 SPON1Q9HCB6 807 aa23.38■■□□□ 1.33
RPUSD3-214ENST00000473522 RIPK4P57078 832 aa23.37■■□□□ 1.33
RPUSD3-214ENST00000473522 COL23A1Q86Y22 540 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-214ENST00000473522 BTBD11A6QL63 1104 aa23.36■■□□□ 1.33
RPUSD3-214ENST00000473522 TAF7Q15545 349 aaPredicted RBP23.36■■□□□ 1.33
RPUSD3-214ENST00000473522 AK7Q96M32 723 aa23.36■■□□□ 1.33
RPUSD3-214ENST00000473522 MTFR1LQ9H019 292 aa23.36■■□□□ 1.33
RPUSD3-214ENST00000473522 CCDC146Q8IYE0 955 aa23.35■■□□□ 1.33
RPUSD3-214ENST00000473522 TTC5Q8N0Z6 440 aa23.35■■□□□ 1.33
RPUSD3-214ENST00000473522 ZBTB7AO95365 584 aa23.34■■□□□ 1.33
RPUSD3-214ENST00000473522 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
RPUSD3-214ENST00000473522 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.33
RPUSD3-214ENST00000473522 SCN11AQ9UI33 1791 aa23.33■■□□□ 1.33
RPUSD3-214ENST00000473522 SSFA2P28290 1259 aa23.33■■□□□ 1.33
RPUSD3-214ENST00000473522 ZNF496Q96IT1 587 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-214ENST00000473522 KCNQ3O43525 872 aa23.32■■□□□ 1.32
RPUSD3-214ENST00000473522 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
RPUSD3-214ENST00000473522 SGIP1Q9BQI5 828 aa23.32■■□□□ 1.32
RPUSD3-214ENST00000473522 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
RPUSD3-214ENST00000473522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-214ENST00000473522 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
RPUSD3-214ENST00000473522 CYP19A1P11511 503 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-214ENST00000473522 PTGER2P43116 358 aa23.31■■□□□ 1.32
RPUSD3-214ENST00000473522 TEX13AQ9BXU3 409 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-214ENST00000473522 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-214ENST00000473522 GNPATO15228 680 aa23.3■■□□□ 1.32
RPUSD3-214ENST00000473522 LMOD3Q0VAK6 560 aa23.3■■□□□ 1.32
RPUSD3-214ENST00000473522 INTS5Q6P9B9 1019 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-214ENST00000473522 FMNL2Q96PY5 1086 aa23.3■■□□□ 1.32
RPUSD3-214ENST00000473522 RTCBQ9Y3I0 505 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-214ENST00000473522 CRKLP46109 303 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-214ENST00000473522 THUMPD2Q9BTF0 503 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-214ENST00000473522 TRIM35Q9UPQ4 493 aa23.29■■□□□ 1.32
RPUSD3-214ENST00000473522 KCPQ6ZWJ8 1503 aa23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 ADRA2BP18089 450 aa23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 TRAPPC3LQ5T215 181 aa23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 SMIM5Q71RC9 77 aa23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 BABAM1Q9NWV8 329 aa23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 ZNF831Q5JPB2 1677 aa23.28■■□□□ 1.32
RPUSD3-214ENST00000473522 HEG1Q9ULI3 1381 aa23.27■■□□□ 1.32
RPUSD3-214ENST00000473522 APAF1O14727 1248 aa23.27■■□□□ 1.32
RPUSD3-214ENST00000473522 MIS18AQ9NYP9 233 aa23.27■■□□□ 1.32
RPUSD3-214ENST00000473522 MSH5O43196 834 aa23.26■■□□□ 1.31
RPUSD3-214ENST00000473522 STARD3NLO95772 234 aa23.26■■□□□ 1.31
RPUSD3-214ENST00000473522 NEUROD2Q15784 382 aa23.26■■□□□ 1.31
RPUSD3-214ENST00000473522 C4BP0C0L5 1744 aa23.25■■□□□ 1.31
RPUSD3-214ENST00000473522 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
RPUSD3-214ENST00000473522 PHF14O94880 888 aa23.25■■□□□ 1.31
RPUSD3-214ENST00000473522 ARHGEF1Q92888 912 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-214ENST00000473522 CCDC87Q9NVE4 849 aa23.25■■□□□ 1.31
RPUSD3-214ENST00000473522 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-214ENST00000473522 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-214ENST00000473522 LRP5O75197 1615 aa23.22■■□□□ 1.31
RPUSD3-214ENST00000473522 C5P01031 1676 aa23.22■■□□□ 1.31
RPUSD3-214ENST00000473522 EIF4A1P60842 406 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-214ENST00000473522 USP16Q9Y5T5 823 aa23.21■■□□□ 1.31
RPUSD3-214ENST00000473522 CHL1O00533 1208 aa23.2■■□□□ 1.3
RPUSD3-214ENST00000473522 ARXQ96QS3 562 aa23.2■■□□□ 1.3
RPUSD3-214ENST00000473522 ZBTB1Q9Y2K1 713 aa23.2■■□□□ 1.3
RPUSD3-214ENST00000473522 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-214ENST00000473522 POLD1P28340 1107 aa23.19■■□□□ 1.3
RPUSD3-214ENST00000473522 RFC4P35249 363 aa23.19■■□□□ 1.3
RPUSD3-214ENST00000473522 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-214ENST00000473522 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms