RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 PARP3Q9Y6F1 533 aa11.87□□□□□ -0.51
SATB2-208ENST00000473517 TAF1LQ8IZX4 1826 aa11.86□□□□□ -0.51
SATB2-208ENST00000473517 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
SATB2-208ENST00000473517 KTN1Q86UP2 1357 aaKnown RBP11.86□□□□□ -0.51
SATB2-208ENST00000473517 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
SATB2-208ENST00000473517 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
SATB2-208ENST00000473517 LOC102724428A0A0B4J2F2 783 aa11.85□□□□□ -0.51
SATB2-208ENST00000473517 SIK1P57059 783 aa11.85□□□□□ -0.51
SATB2-208ENST00000473517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.85□□□□□ -0.51
SATB2-208ENST00000473517 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
SATB2-208ENST00000473517 ARFGEF1Q9Y6D6 1849 aa11.85□□□□□ -0.51
SATB2-208ENST00000473517 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
SATB2-208ENST00000473517 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
SATB2-208ENST00000473517 RASSF7Q02833 373 aa11.84□□□□□ -0.51
SATB2-208ENST00000473517 NBPF1Q3BBV0 1214 aa11.84□□□□□ -0.51
SATB2-208ENST00000473517 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
SATB2-208ENST00000473517 MEGF6O75095 1541 aa11.83□□□□□ -0.52
SATB2-208ENST00000473517 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
SATB2-208ENST00000473517 NME9Q86XW9 330 aa11.83□□□□□ -0.52
SATB2-208ENST00000473517 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
SATB2-208ENST00000473517 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
SATB2-208ENST00000473517 GYS1P13807 737 aa11.82□□□□□ -0.52
SATB2-208ENST00000473517 PIGBQ92521 554 aa11.82□□□□□ -0.52
SATB2-208ENST00000473517 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
SATB2-208ENST00000473517 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
SATB2-208ENST00000473517 SBF1O95248 1867 aa11.81□□□□□ -0.52
SATB2-208ENST00000473517 CHRNA5P30532 468 aa11.81□□□□□ -0.52
SATB2-208ENST00000473517 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
SATB2-208ENST00000473517 ITPK1Q13572 414 aa11.81□□□□□ -0.52
SATB2-208ENST00000473517 DEFB115Q30KQ5 88 aa11.81□□□□□ -0.52
SATB2-208ENST00000473517 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
SATB2-208ENST00000473517 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
SATB2-208ENST00000473517 POTEJP0CG39 1038 aa11.8□□□□□ -0.52
SATB2-208ENST00000473517 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
SATB2-208ENST00000473517 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
SATB2-208ENST00000473517 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
SATB2-208ENST00000473517 FAM208AQ9UK61 1670 aaKnown RBP11.79□□□□□ -0.52
SATB2-208ENST00000473517 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
SATB2-208ENST00000473517 TNRC18O15417 2968 aaPredicted RBP11.79□□□□□ -0.52
SATB2-208ENST00000473517 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
SATB2-208ENST00000473517 RFC4P35249 363 aa11.79□□□□□ -0.52
SATB2-208ENST00000473517 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
SATB2-208ENST00000473517 MCOLN1Q9GZU1 580 aa11.79□□□□□ -0.52
SATB2-208ENST00000473517 C4AP0C0L4 1744 aa11.79□□□□□ -0.52
SATB2-208ENST00000473517 LTN1O94822 1766 aa11.79□□□□□ -0.52
SATB2-208ENST00000473517 ITGBL1O95965 494 aaPredicted RBP11.78□□□□□ -0.52
SATB2-208ENST00000473517 HOXC9P31274 260 aa11.78□□□□□ -0.52
SATB2-208ENST00000473517 NBPF6Q5VWK0 638 aa11.78□□□□□ -0.52
SATB2-208ENST00000473517 NBPF4Q96M43 638 aa11.78□□□□□ -0.52
SATB2-208ENST00000473517 SBNO2Q9Y2G9 1366 aa11.78□□□□□ -0.52
SATB2-208ENST00000473517 CYP27B1O15528 508 aa11.77□□□□□ -0.53
SATB2-208ENST00000473517 AMPHP49418 695 aa11.77□□□□□ -0.53
SATB2-208ENST00000473517 NCBP3Q53F19 620 aaKnown RBP11.77□□□□□ -0.53
SATB2-208ENST00000473517 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
SATB2-208ENST00000473517 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
SATB2-208ENST00000473517 MAP3K19Q56UN5 1328 aa11.76□□□□□ -0.53
SATB2-208ENST00000473517 IQCA1LA6NCM1 817 aa11.75□□□□□ -0.53
SATB2-208ENST00000473517 NFKBIEO00221 500 aa11.75□□□□□ -0.53
SATB2-208ENST00000473517 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
SATB2-208ENST00000473517 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
SATB2-208ENST00000473517 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
SATB2-208ENST00000473517 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
SATB2-208ENST00000473517 MAP2P11137 1827 aaKnown RBP11.74□□□□□ -0.53
SATB2-208ENST00000473517 DDR1Q08345 913 aa11.74□□□□□ -0.53
SATB2-208ENST00000473517 TTLL6Q8N841 843 aa11.74□□□□□ -0.53
SATB2-208ENST00000473517 TMOD3Q9NYL9 352 aa11.74□□□□□ -0.53
SATB2-208ENST00000473517 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
SATB2-208ENST00000473517 ECE1P42892 770 aa11.73□□□□□ -0.53
SATB2-208ENST00000473517 USHBP1Q8N6Y0 703 aa11.73□□□□□ -0.53
SATB2-208ENST00000473517 GCC1Q96CN9 775 aa11.73□□□□□ -0.53
SATB2-208ENST00000473517 SMG6Q86US8 1419 aaKnown RBP11.72□□□□□ -0.53
SATB2-208ENST00000473517 CNTNAP4Q9C0A0 1308 aa11.72□□□□□ -0.53
SATB2-208ENST00000473517 CA12O43570 354 aa11.72□□□□□ -0.53
SATB2-208ENST00000473517 DGKZQ13574 1117 aa11.72□□□□□ -0.53
SATB2-208ENST00000473517 FKBP8Q14318 412 aa11.72□□□□□ -0.53
SATB2-208ENST00000473517 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
SATB2-208ENST00000473517 GPR101Q96P66 508 aaPredicted RBP11.72□□□□□ -0.53
SATB2-208ENST00000473517 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
SATB2-208ENST00000473517 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
SATB2-208ENST00000473517 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
SATB2-208ENST00000473517 TM4SF1P30408 202 aa11.71□□□□□ -0.53
SATB2-208ENST00000473517 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
SATB2-208ENST00000473517 L3MBTL3Q96JM7 780 aaPredicted RBP11.71□□□□□ -0.53
SATB2-208ENST00000473517 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
SATB2-208ENST00000473517 EDC4Q6P2E9 1401 aaKnown RBP11.7□□□□□ -0.54
SATB2-208ENST00000473517 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
SATB2-208ENST00000473517 CAPNS2Q96L46 248 aa11.7□□□□□ -0.54
SATB2-208ENST00000473517 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
SATB2-208ENST00000473517 MAP2K2P36507 400 aa11.69□□□□□ -0.54
SATB2-208ENST00000473517 CNTROBQ8N137 903 aa11.69□□□□□ -0.54
SATB2-208ENST00000473517 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
SATB2-208ENST00000473517 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
SATB2-208ENST00000473517 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
SATB2-208ENST00000473517 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
SATB2-208ENST00000473517 KDRP35968 1356 aa11.68□□□□□ -0.54
SATB2-208ENST00000473517 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
SATB2-208ENST00000473517 FBLN1P23142 703 aa11.68□□□□□ -0.54
SATB2-208ENST00000473517 SOX10P56693 466 aa11.68□□□□□ -0.54
SATB2-208ENST00000473517 COG3Q96JB2 828 aa11.68□□□□□ -0.54
SATB2-208ENST00000473517 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms