RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 SCTRP47872 440 aa12.34□□□□□ -0.43
A1CF-209ENST00000473480 ABCC2Q92887 1545 aa12.33□□□□□ -0.44
A1CF-209ENST00000473480 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
A1CF-209ENST00000473480 PTGIRP43119 386 aa12.33□□□□□ -0.44
A1CF-209ENST00000473480 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
A1CF-209ENST00000473480 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
A1CF-209ENST00000473480 SOS2Q07890 1332 aaPredicted RBP12.33□□□□□ -0.44
A1CF-209ENST00000473480 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
A1CF-209ENST00000473480 CYP2U1Q7Z449 544 aa12.32□□□□□ -0.44
A1CF-209ENST00000473480 KDF1Q8NAX2 398 aaPredicted RBP12.32□□□□□ -0.44
A1CF-209ENST00000473480 ZNF395Q9H8N7 513 aaPredicted RBP12.32□□□□□ -0.44
A1CF-209ENST00000473480 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
A1CF-209ENST00000473480 TTLL8A6PVC2 850 aa12.31□□□□□ -0.44
A1CF-209ENST00000473480 MAN1A2O60476 641 aa12.31□□□□□ -0.44
A1CF-209ENST00000473480 USP4Q13107 963 aa12.31□□□□□ -0.44
A1CF-209ENST00000473480 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
A1CF-209ENST00000473480 PLPP7Q8NBV4 271 aa12.31□□□□□ -0.44
A1CF-209ENST00000473480 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
A1CF-209ENST00000473480 EPRSP07814 1512 aaKnown RBP12.31□□□□□ -0.44
A1CF-209ENST00000473480 TRAK2O60296 914 aa12.3□□□□□ -0.44
A1CF-209ENST00000473480 ADAMTS19Q8TE59 1207 aa12.3□□□□□ -0.44
A1CF-209ENST00000473480 OSBPL3Q9H4L5 887 aa12.3□□□□□ -0.44
A1CF-209ENST00000473480 OXLD1Q5BKU9 147 aa12.29□□□□□ -0.44
A1CF-209ENST00000473480 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
A1CF-209ENST00000473480 INSM2Q96T92 566 aaPredicted RBP12.29□□□□□ -0.44
A1CF-209ENST00000473480 PTPRGP23470 1445 aa12.28□□□□□ -0.44
A1CF-209ENST00000473480 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
A1CF-209ENST00000473480 PIK3CDO00329 1044 aa12.28□□□□□ -0.44
A1CF-209ENST00000473480 ZNF775Q96BV0 537 aaPredicted RBP12.28□□□□□ -0.44
A1CF-209ENST00000473480 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
A1CF-209ENST00000473480 DNMT3LQ9UJW3 386 aa12.27□□□□□ -0.45
A1CF-209ENST00000473480 SOBPA7XYQ1 873 aa12.26□□□□□ -0.45
A1CF-209ENST00000473480 SKIP12755 728 aa12.26□□□□□ -0.45
A1CF-209ENST00000473480 CTSOP43234 321 aaPredicted RBP12.26□□□□□ -0.45
A1CF-209ENST00000473480 GLMNQ92990 594 aa12.26□□□□□ -0.45
A1CF-209ENST00000473480 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
A1CF-209ENST00000473480 GNRH1P01148 92 aa12.25□□□□□ -0.45
A1CF-209ENST00000473480 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.25□□□□□ -0.451e-5■□□□□ 9.3
A1CF-209ENST00000473480 CUL7Q14999 1698 aa12.25□□□□□ -0.45
A1CF-209ENST00000473480 A0A1W2PRU2 124 aa12.24□□□□□ -0.45
A1CF-209ENST00000473480 LZTS3O60299 673 aaPredicted RBP12.24□□□□□ -0.45
A1CF-209ENST00000473480 ERICH3Q5RHP9 1530 aa12.24□□□□□ -0.45
A1CF-209ENST00000473480 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
A1CF-209ENST00000473480 ARID4BQ4LE39 1312 aaPredicted RBP12.23□□□□□ -0.45
A1CF-209ENST00000473480 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
A1CF-209ENST00000473480 MEN1O00255 615 aa12.23□□□□□ -0.45
A1CF-209ENST00000473480 CLN3Q13286 438 aa12.23□□□□□ -0.45
A1CF-209ENST00000473480 EML3Q32P44 896 aa12.22□□□□□ -0.45
A1CF-209ENST00000473480 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
A1CF-209ENST00000473480 CALR3Q96L12 384 aaKnown RBP12.22□□□□□ -0.45
A1CF-209ENST00000473480 NLRP3Q96P20 1036 aa12.22□□□□□ -0.45
A1CF-209ENST00000473480 ARHGEF10LQ9HCE6 1279 aa12.22□□□□□ -0.45
A1CF-209ENST00000473480 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
A1CF-209ENST00000473480 GPC1P35052 558 aa12.21□□□□□ -0.45
A1CF-209ENST00000473480 RNF144AP50876 292 aaPredicted RBP12.21□□□□□ -0.45
A1CF-209ENST00000473480 FOXD4L5Q5VV16 416 aaPredicted RBP12.21□□□□□ -0.45
A1CF-209ENST00000473480 UCN2Q96RP3 112 aa12.21□□□□□ -0.45
A1CF-209ENST00000473480 ZMYND15Q9H091 742 aa12.21□□□□□ -0.45
A1CF-209ENST00000473480 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.45
A1CF-209ENST00000473480 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
A1CF-209ENST00000473480 TERTO14746 1132 aaKnown RBP12.19□□□□□ -0.46
A1CF-209ENST00000473480 ATP9BO43861 1147 aa12.19□□□□□ -0.46
A1CF-209ENST00000473480 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
A1CF-209ENST00000473480 NPAS3Q8IXF0 933 aa12.19□□□□□ -0.46
A1CF-209ENST00000473480 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
A1CF-209ENST00000473480 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
A1CF-209ENST00000473480 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 NCOA4Q13772 614 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 RAB6BQ9NRW1 208 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 NOD1Q9Y239 953 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
A1CF-209ENST00000473480 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
A1CF-209ENST00000473480 RIMS1Q86UR5 1692 aaKnown RBP12.17□□□□□ -0.46
A1CF-209ENST00000473480 LYSMD3Q7Z3D4 306 aa12.17□□□□□ -0.46
A1CF-209ENST00000473480 PLEKHM2Q8IWE5 1019 aa12.17□□□□□ -0.46
A1CF-209ENST00000473480 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
A1CF-209ENST00000473480 ZNF777Q9ULD5 760 aaPredicted RBP12.17□□□□□ -0.46
A1CF-209ENST00000473480 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
A1CF-209ENST00000473480 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
A1CF-209ENST00000473480 DEPDC4Q8N2C3 294 aa12.16□□□□□ -0.46
A1CF-209ENST00000473480 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
A1CF-209ENST00000473480 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 IL2RAP01589 272 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 PTSQ03393 145 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 USP17L2Q6R6M4 530 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 SLC16A10Q8TF71 515 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 XAGE2Q96GT9 111 aa12.15□□□□□ -0.46
A1CF-209ENST00000473480 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
A1CF-209ENST00000473480 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
A1CF-209ENST00000473480 ETNK1Q9HBU6 452 aa12.14□□□□□ -0.47
A1CF-209ENST00000473480 UACAQ9BZF9 1416 aa12.13□□□□□ -0.47
A1CF-209ENST00000473480 ARAP3Q8WWN8 1544 aa12.13□□□□□ -0.47
A1CF-209ENST00000473480 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
A1CF-209ENST00000473480 WFS1O76024 890 aa12.13□□□□□ -0.47
A1CF-209ENST00000473480 PRICKLE2Q7Z3G6 844 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms