RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 FANCIQ9NVI1 1328 aa24.63■■□□□ 1.53
TNFRSF25-211ENST00000473343 TSR2Q969E8 191 aaKnown RBP24.63■■□□□ 1.53
TNFRSF25-211ENST00000473343 CABP4P57796 275 aa24.61■■□□□ 1.53
TNFRSF25-211ENST00000473343 NFATC2IPQ8NCF5 419 aa24.61■■□□□ 1.53
TNFRSF25-211ENST00000473343 MIS18AQ9NYP9 233 aa24.6■■□□□ 1.53
TNFRSF25-211ENST00000473343 TSPYL4Q9UJ04 414 aa24.6■■□□□ 1.53
TNFRSF25-211ENST00000473343 VIRMAQ69YN4 1812 aaKnown RBP24.6■■□□□ 1.53
TNFRSF25-211ENST00000473343 TOGARAM1Q9Y4F4 1720 aa24.59■■□□□ 1.53
TNFRSF25-211ENST00000473343 BTBD11A6QL63 1104 aa24.59■■□□□ 1.53
TNFRSF25-211ENST00000473343 SIPA1L3O60292 1781 aaPredicted RBP24.57■■□□□ 1.52
TNFRSF25-211ENST00000473343 BCL9O00512 1426 aa24.57■■□□□ 1.52
TNFRSF25-211ENST00000473343 KRT27Q7Z3Y8 459 aa24.56■■□□□ 1.52
TNFRSF25-211ENST00000473343 RGS12O14924 1447 aa24.55■■□□□ 1.52
TNFRSF25-211ENST00000473343 TMOD3Q9NYL9 352 aa24.55■■□□□ 1.52
TNFRSF25-211ENST00000473343 PRIM1P49642 420 aaKnown RBP24.54■■□□□ 1.52
TNFRSF25-211ENST00000473343 EXOSC9Q06265 439 aaKnown RBP24.54■■□□□ 1.52
TNFRSF25-211ENST00000473343 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
TNFRSF25-211ENST00000473343 PIGBQ92521 554 aa24.53■■□□□ 1.52
TNFRSF25-211ENST00000473343 KCNQ3O43525 872 aa24.52■■□□□ 1.52
TNFRSF25-211ENST00000473343 ZNF790Q6PG37 636 aa24.52■■□□□ 1.52
TNFRSF25-211ENST00000473343 ACSBG1Q96GR2 724 aa24.52■■□□□ 1.52
TNFRSF25-211ENST00000473343 DOT1LQ8TEK3 1739 aa24.52■■□□□ 1.52
TNFRSF25-211ENST00000473343 SYTL4Q96C24 671 aaPredicted RBP24.51■■□□□ 1.51
TNFRSF25-211ENST00000473343 KDM3BQ7LBC6 1761 aa24.51■■□□□ 1.51
TNFRSF25-211ENST00000473343 SLC39A6Q13433 755 aa24.5■■□□□ 1.51
TNFRSF25-211ENST00000473343 BRWD3Q6RI45 1802 aa24.5■■□□□ 1.51
TNFRSF25-211ENST00000473343 EIF4A1P60842 406 aaKnown RBP24.5■■□□□ 1.51
TNFRSF25-211ENST00000473343 KRT24Q2M2I5 525 aa24.49■■□□□ 1.51
TNFRSF25-211ENST00000473343 C8orf58Q8NAV2 365 aa24.49■■□□□ 1.51
TNFRSF25-211ENST00000473343 CT47B1P0C2W7 299 aaPredicted RBP24.48■■□□□ 1.51
TNFRSF25-211ENST00000473343 FAM196AQ6ZSG2 479 aa24.48■■□□□ 1.51
TNFRSF25-211ENST00000473343 ITGB4P16144 1822 aa24.48■■□□□ 1.51
TNFRSF25-211ENST00000473343 KCNQ2O43526 872 aa24.47■■□□□ 1.51
TNFRSF25-211ENST00000473343 TTC5Q8N0Z6 440 aa24.47■■□□□ 1.51
TNFRSF25-211ENST00000473343 TSPYL6Q8N831 410 aa24.47■■□□□ 1.51
TNFRSF25-211ENST00000473343 TWISTNBQ3B726 338 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF25-211ENST00000473343 ATG3Q9NT62 314 aa24.46■■□□□ 1.51
TNFRSF25-211ENST00000473343 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
TNFRSF25-211ENST00000473343 HEG1Q9ULI3 1381 aa24.45■■□□□ 1.5
TNFRSF25-211ENST00000473343 ELL2O00472 640 aaPredicted RBP24.45■■□□□ 1.5
TNFRSF25-211ENST00000473343 VAMP4O75379 141 aa24.45■■□□□ 1.5
TNFRSF25-211ENST00000473343 PAPPAQ13219 1627 aa24.45■■□□□ 1.5
TNFRSF25-211ENST00000473343 ZNF496Q96IT1 587 aaPredicted RBP24.44■■□□□ 1.5
TNFRSF25-211ENST00000473343 RCAN3Q9UKA8 241 aa24.44■■□□□ 1.5
TNFRSF25-211ENST00000473343 SOS1Q07889 1333 aaPredicted RBP24.44■■□□□ 1.5
TNFRSF25-211ENST00000473343 FMNL2Q96PY5 1086 aa24.43■■□□□ 1.5
TNFRSF25-211ENST00000473343 NHSQ6T4R5 1651 aa24.42■■□□□ 1.5
TNFRSF25-211ENST00000473343 PTF1AQ7RTS3 328 aa24.42■■□□□ 1.5
TNFRSF25-211ENST00000473343 ZNF428Q96B54 188 aa24.42■■□□□ 1.5
TNFRSF25-211ENST00000473343 KCPQ6ZWJ8 1503 aa24.41■■□□□ 1.5
TNFRSF25-211ENST00000473343 GIGYF1O75420 1035 aaPredicted RBP24.41■■□□□ 1.5
TNFRSF25-211ENST00000473343 HOXB7P09629 217 aa24.41■■□□□ 1.5
TNFRSF25-211ENST00000473343 KAT6BQ8WYB5 2073 aa24.4■■□□□ 1.5
TNFRSF25-211ENST00000473343 BCL11BQ9C0K0 894 aaPredicted RBP24.4■■□□□ 1.5
TNFRSF25-211ENST00000473343 UBR2Q8IWV8 1755 aa24.39■■□□□ 1.5
TNFRSF25-211ENST00000473343 RARSP54136 660 aaKnown RBP24.39■■□□□ 1.5
TNFRSF25-211ENST00000473343 PTCD1O75127 700 aaKnown RBP24.38■■□□□ 1.49
TNFRSF25-211ENST00000473343 SBF2Q86WG5 1849 aa24.38■■□□□ 1.49
TNFRSF25-211ENST00000473343 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
TNFRSF25-211ENST00000473343 SMARCC1Q92922 1105 aaPredicted RBP24.37■■□□□ 1.49
TNFRSF25-211ENST00000473343 PRAMEF22A3QJZ6 481 aa24.36■■□□□ 1.49
TNFRSF25-211ENST00000473343 ALDH1L2Q3SY69 923 aa24.36■■□□□ 1.49
TNFRSF25-211ENST00000473343 VSIG10Q8N0Z9 540 aa24.36■■□□□ 1.49
TNFRSF25-211ENST00000473343 PALLDQ8WX93 1383 aa24.36■■□□□ 1.49
TNFRSF25-211ENST00000473343 EP400Q96L91 3159 aa24.36■■□□□ 1.49
TNFRSF25-211ENST00000473343 SSH1Q8WYL5 1049 aa24.35■■□□□ 1.49
TNFRSF25-211ENST00000473343 TRIM37O94972 964 aa24.34■■□□□ 1.49
TNFRSF25-211ENST00000473343 RBM42Q9BTD8 480 aaKnown RBP24.34■■□□□ 1.49
TNFRSF25-211ENST00000473343 HDGFL1Q5TGJ6 251 aa24.33■■□□□ 1.49
TNFRSF25-211ENST00000473343 CHMP4AQ9BY43 222 aa24.33■■□□□ 1.49
TNFRSF25-211ENST00000473343 BTAF1O14981 1849 aa24.33■■□□□ 1.49
TNFRSF25-211ENST00000473343 BCAR3O75815 825 aa24.33■■□□□ 1.48
TNFRSF25-211ENST00000473343 CCDC30Q5VVM6 783 aa24.33■■□□□ 1.48
TNFRSF25-211ENST00000473343 BCL2L13Q9BXK5 485 aa24.33■■□□□ 1.48
TNFRSF25-211ENST00000473343 EIF2S2P20042 333 aaKnown RBP24.32■■□□□ 1.48
TNFRSF25-211ENST00000473343 SLC4A9Q96Q91 983 aa24.32■■□□□ 1.48
TNFRSF25-211ENST00000473343 SMC4Q9NTJ3 1288 aa24.32■■□□□ 1.48
TNFRSF25-211ENST00000473343 SUPT16HQ9Y5B9 1047 aaKnown RBP24.32■■□□□ 1.48
TNFRSF25-211ENST00000473343 LOC102724428A0A0B4J2F2 783 aa24.31■■□□□ 1.48
TNFRSF25-211ENST00000473343 SIK1P57059 783 aa24.31■■□□□ 1.48
TNFRSF25-211ENST00000473343 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
TNFRSF25-211ENST00000473343 TCERG1O14776 1098 aaKnown RBP24.3■■□□□ 1.48
TNFRSF25-211ENST00000473343 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF25-211ENST00000473343 C5P01031 1676 aa24.3■■□□□ 1.48
TNFRSF25-211ENST00000473343 BRPF1P55201 1214 aaPredicted RBP24.29■■□□□ 1.48
TNFRSF25-211ENST00000473343 MRPL50Q8N5N7 158 aaKnown RBP24.29■■□□□ 1.48
TNFRSF25-211ENST00000473343 NECTIN2Q92692 538 aa24.29■■□□□ 1.48
TNFRSF25-211ENST00000473343 RNF123Q5XPI4 1314 aa24.28■■□□□ 1.48
TNFRSF25-211ENST00000473343 DNAJC10Q8IXB1 793 aa24.28■■□□□ 1.48
TNFRSF25-211ENST00000473343 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
TNFRSF25-211ENST00000473343 ATP6V1AP38606 617 aa24.27■■□□□ 1.48
TNFRSF25-211ENST00000473343 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
TNFRSF25-211ENST00000473343 CHPF2Q9P2E5 772 aa24.25■■□□□ 1.47
TNFRSF25-211ENST00000473343 DBF4Q9UBU7 674 aaPredicted RBP24.25■■□□□ 1.47
TNFRSF25-211ENST00000473343 LAMB4A4D0S4 1761 aa24.25■■□□□ 1.47
TNFRSF25-211ENST00000473343 STARD3NLO95772 234 aa24.25■■□□□ 1.47
TNFRSF25-211ENST00000473343 RRP1P56182 461 aaKnown RBP24.25■■□□□ 1.47
TNFRSF25-211ENST00000473343 ITPK1Q13572 414 aa24.24■■□□□ 1.47
TNFRSF25-211ENST00000473343 PDIA6Q15084 440 aa24.24■■□□□ 1.47
TNFRSF25-211ENST00000473343 ZNF831Q5JPB2 1677 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms