RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 FHDC1Q9C0D6 1143 aaPredicted RBP21.9■■□□□ 1.1
PTK7-211ENST00000473339 LGR6Q9HBX8 967 aa21.9■■□□□ 1.1
PTK7-211ENST00000473339 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
PTK7-211ENST00000473339 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
PTK7-211ENST00000473339 NFATC2IPQ8NCF5 419 aa21.89■■□□□ 1.09
PTK7-211ENST00000473339 ARXQ96QS3 562 aa21.89■■□□□ 1.09
PTK7-211ENST00000473339 MAP3K5Q99683 1374 aa21.87■■□□□ 1.09
PTK7-211ENST00000473339 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
PTK7-211ENST00000473339 CABP4P57796 275 aa21.87■■□□□ 1.09
PTK7-211ENST00000473339 C1orf141Q5JVX7 400 aa21.87■■□□□ 1.09
PTK7-211ENST00000473339 ADAMTS7Q9UKP4 1686 aa21.85■■□□□ 1.09
PTK7-211ENST00000473339 UBR3Q6ZT12 1888 aa21.84■■□□□ 1.09
PTK7-211ENST00000473339 RNMTO43148 476 aaKnown RBP21.84■■□□□ 1.09
PTK7-211ENST00000473339 ZNF831Q5JPB2 1677 aa21.84■■□□□ 1.09
PTK7-211ENST00000473339 MRC1P22897 1456 aa21.83■■□□□ 1.09
PTK7-211ENST00000473339 HMGB2P26583 209 aaKnown RBP21.83■■□□□ 1.09
PTK7-211ENST00000473339 SLC52A2Q9HAB3 445 aa21.83■■□□□ 1.09
PTK7-211ENST00000473339 SCN11AQ9UI33 1791 aa21.83■■□□□ 1.09
PTK7-211ENST00000473339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
PTK7-211ENST00000473339 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
PTK7-211ENST00000473339 FLAD1Q8NFF5 587 aa21.82■■□□□ 1.08
PTK7-211ENST00000473339 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
PTK7-211ENST00000473339 AK7Q96M32 723 aa21.82■■□□□ 1.08
PTK7-211ENST00000473339 RSPH6AQ9H0K4 717 aa21.82■■□□□ 1.08
PTK7-211ENST00000473339 SSFA2P28290 1259 aa21.81■■□□□ 1.08
PTK7-211ENST00000473339 MSL1Q68DK7 614 aa21.81■■□□□ 1.08
PTK7-211ENST00000473339 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
PTK7-211ENST00000473339 RC3H1Q5TC82 1133 aaKnown RBP21.79■■□□□ 1.08
PTK7-211ENST00000473339 IL17REQ8NFR9 667 aa21.79■■□□□ 1.08
PTK7-211ENST00000473339 GNPATO15228 680 aa21.78■■□□□ 1.08
PTK7-211ENST00000473339 MSH5O43196 834 aa21.78■■□□□ 1.08
PTK7-211ENST00000473339 PTCD1O75127 700 aaKnown RBP21.78■■□□□ 1.08
PTK7-211ENST00000473339 PHF14O94880 888 aa21.78■■□□□ 1.08
PTK7-211ENST00000473339 POLD1P28340 1107 aa21.78■■□□□ 1.08
PTK7-211ENST00000473339 CNTNAP4Q9C0A0 1308 aa21.78■■□□□ 1.08
PTK7-211ENST00000473339 COL5A3P25940 1745 aaPredicted RBP21.77■■□□□ 1.08
PTK7-211ENST00000473339 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
PTK7-211ENST00000473339 SLC39A6Q13433 755 aa21.76■■□□□ 1.07
PTK7-211ENST00000473339 NLGN2Q8NFZ4 835 aa21.76■■□□□ 1.07
PTK7-211ENST00000473339 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
PTK7-211ENST00000473339 CICQ96RK0 1608 aaPredicted RBP21.76■■□□□ 1.07
PTK7-211ENST00000473339 MYH14Q7Z406 1995 aaKnown RBP21.76■■□□□ 1.07
PTK7-211ENST00000473339 KCPQ6ZWJ8 1503 aa21.75■■□□□ 1.07
PTK7-211ENST00000473339 CEMIPQ8WUJ3 1361 aa21.74■■□□□ 1.07
PTK7-211ENST00000473339 RPS6KA4O75676 772 aa21.74■■□□□ 1.07
PTK7-211ENST00000473339 TJP1Q07157 1748 aa21.74■■□□□ 1.07
PTK7-211ENST00000473339 FCHSD2O94868 740 aa21.73■■□□□ 1.07
PTK7-211ENST00000473339 INTS5Q6P9B9 1019 aaKnown RBP21.73■■□□□ 1.07
PTK7-211ENST00000473339 GAS2L2Q8NHY3 880 aa21.73■■□□□ 1.07
PTK7-211ENST00000473339 ARHGEF1Q92888 912 aaKnown RBP21.73■■□□□ 1.07
PTK7-211ENST00000473339 GNAT3A8MTJ3 354 aa21.72■■□□□ 1.07
PTK7-211ENST00000473339 CRKLP46109 303 aaKnown RBP21.72■■□□□ 1.07
PTK7-211ENST00000473339 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
PTK7-211ENST00000473339 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
PTK7-211ENST00000473339 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
PTK7-211ENST00000473339 NUDCQ9Y266 331 aa21.71■■□□□ 1.07
PTK7-211ENST00000473339 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
PTK7-211ENST00000473339 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
PTK7-211ENST00000473339 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
PTK7-211ENST00000473339 VIRMAQ69YN4 1812 aaKnown RBP21.69■■□□□ 1.06
PTK7-211ENST00000473339 CYP19A1P11511 503 aaPredicted RBP21.69■■□□□ 1.06
PTK7-211ENST00000473339 ADRA2BP18089 450 aa21.69■■□□□ 1.06
PTK7-211ENST00000473339 GYS1P13807 737 aa21.68■■□□□ 1.06
PTK7-211ENST00000473339 PLEKHF1Q96S99 279 aa21.68■■□□□ 1.06
PTK7-211ENST00000473339 VSIG10Q8N0Z9 540 aa21.67■■□□□ 1.06
PTK7-211ENST00000473339 CD2APQ9Y5K6 639 aa21.67■■□□□ 1.06
PTK7-211ENST00000473339 SIPA1L3O60292 1781 aaPredicted RBP21.66■■□□□ 1.06
PTK7-211ENST00000473339 UBR2Q8IWV8 1755 aa21.66■■□□□ 1.06
PTK7-211ENST00000473339 KLHL34Q8N239 644 aa21.66■■□□□ 1.06
PTK7-211ENST00000473339 ZNF790Q6PG37 636 aa21.65■■□□□ 1.06
PTK7-211ENST00000473339 ZNF496Q96IT1 587 aaPredicted RBP21.65■■□□□ 1.06
PTK7-211ENST00000473339 KCNQ3O43525 872 aa21.64■■□□□ 1.05
PTK7-211ENST00000473339 RALBP1Q15311 655 aa21.64■■□□□ 1.05
PTK7-211ENST00000473339 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
PTK7-211ENST00000473339 MMP10P09238 476 aa21.63■■□□□ 1.05
PTK7-211ENST00000473339 YBX3P16989 372 aaKnown RBP eCLIP21.63■■□□□ 1.05
PTK7-211ENST00000473339 CCDC87Q9NVE4 849 aa21.63■■□□□ 1.05
PTK7-211ENST00000473339 SRP68Q9UHB9 627 aaKnown RBP21.63■■□□□ 1.05
PTK7-211ENST00000473339 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
PTK7-211ENST00000473339 YY1P25490 414 aa21.62■■□□□ 1.05
PTK7-211ENST00000473339 MCM10Q7L590 875 aa21.62■■□□□ 1.05
PTK7-211ENST00000473339 NLGN1Q8N2Q7 840 aa21.62■■□□□ 1.05
PTK7-211ENST00000473339 ZBTB1Q9Y2K1 713 aa21.62■■□□□ 1.05
PTK7-211ENST00000473339 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
PTK7-211ENST00000473339 DCAF8L1A6NGE4 600 aa21.61■■□□□ 1.05
PTK7-211ENST00000473339 RFC4P35249 363 aa21.61■■□□□ 1.05
PTK7-211ENST00000473339 TEFQ10587 303 aa21.61■■□□□ 1.05
PTK7-211ENST00000473339 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
PTK7-211ENST00000473339 HEG1Q9ULI3 1381 aa21.61■■□□□ 1.05
PTK7-211ENST00000473339 HTATSF1O43719 755 aaKnown RBP21.6■■□□□ 1.05
PTK7-211ENST00000473339 FKBP8Q14318 412 aa21.6■■□□□ 1.05
PTK7-211ENST00000473339 GPR162Q16538 588 aa21.58■■□□□ 1.05
PTK7-211ENST00000473339 BCL2L12Q9HB09 334 aa21.58■■□□□ 1.05
PTK7-211ENST00000473339 BTBD11A6QL63 1104 aa21.57■■□□□ 1.04
PTK7-211ENST00000473339 TM4SF1P30408 202 aa21.57■■□□□ 1.04
PTK7-211ENST00000473339 DDR1Q08345 913 aa21.57■■□□□ 1.04
PTK7-211ENST00000473339 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
PTK7-211ENST00000473339 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
PTK7-211ENST00000473339 C10orf71Q711Q0 1435 aa21.55■■□□□ 1.04
PTK7-211ENST00000473339 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms