RNA–Protein interactions for RNA: ENST00000473222.1

NR1H3-218, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-218ENST00000473222 CCDC27Q2M243 656 aa23.31■■□□□ 1.32
NR1H3-218ENST00000473222 BTAF1O14981 1849 aa23.3■■□□□ 1.32
NR1H3-218ENST00000473222 TAF7Q15545 349 aaPredicted RBP23.29■■□□□ 1.32
NR1H3-218ENST00000473222 MRC1P22897 1456 aa23.29■■□□□ 1.32
NR1H3-218ENST00000473222 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
NR1H3-218ENST00000473222 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
NR1H3-218ENST00000473222 ATG3Q9NT62 314 aa23.28■■□□□ 1.32
NR1H3-218ENST00000473222 SOCS7O14512 581 aa23.27■■□□□ 1.32
NR1H3-218ENST00000473222 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
NR1H3-218ENST00000473222 ASAP1Q9ULH1 1129 aa23.27■■□□□ 1.32
NR1H3-218ENST00000473222 BAG6P46379 1132 aa23.26■■□□□ 1.31
NR1H3-218ENST00000473222 WWC1Q8IX03 1113 aa23.26■■□□□ 1.31
NR1H3-218ENST00000473222 SIPA1L3O60292 1781 aaPredicted RBP23.26■■□□□ 1.31
NR1H3-218ENST00000473222 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
NR1H3-218ENST00000473222 CAMKK2Q96RR4 588 aa23.25■■□□□ 1.31
NR1H3-218ENST00000473222 DEFB132Q7Z7B7 95 aa23.24■■□□□ 1.31
NR1H3-218ENST00000473222 BTBD11A6QL63 1104 aa23.23■■□□□ 1.31
NR1H3-218ENST00000473222 EN1Q05925 392 aaPredicted RBP23.23■■□□□ 1.31
NR1H3-218ENST00000473222 PROM2Q8N271 834 aa23.23■■□□□ 1.31
NR1H3-218ENST00000473222 BABAM1Q9NWV8 329 aa23.23■■□□□ 1.31
NR1H3-218ENST00000473222 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
NR1H3-218ENST00000473222 CALD1Q05682 793 aaKnown RBP23.21■■□□□ 1.31
NR1H3-218ENST00000473222 SLC39A6Q13433 755 aa23.21■■□□□ 1.31
NR1H3-218ENST00000473222 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
NR1H3-218ENST00000473222 WDR63Q8IWG1 891 aa23.21■■□□□ 1.31
NR1H3-218ENST00000473222 CHL1O00533 1208 aa23.2■■□□□ 1.3
NR1H3-218ENST00000473222 PALLDQ8WX93 1383 aa23.19■■□□□ 1.3
NR1H3-218ENST00000473222 ZNF853P0CG23 659 aa23.19■■□□□ 1.3
NR1H3-218ENST00000473222 EZH2Q15910 746 aaKnown RBP23.19■■□□□ 1.3
NR1H3-218ENST00000473222 TXNRD1Q16881 649 aa23.19■■□□□ 1.3
NR1H3-218ENST00000473222 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
NR1H3-218ENST00000473222 MIS18AQ9NYP9 233 aa23.19■■□□□ 1.3
NR1H3-218ENST00000473222 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
NR1H3-218ENST00000473222 RGPD3A6NKT7 1758 aaPredicted RBP23.18■■□□□ 1.3
NR1H3-218ENST00000473222 RGPD4Q7Z3J3 1758 aa23.18■■□□□ 1.3
NR1H3-218ENST00000473222 LY75O60449 1722 aa23.18■■□□□ 1.3
NR1H3-218ENST00000473222 IL16Q14005 1332 aa23.17■■□□□ 1.3
NR1H3-218ENST00000473222 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
NR1H3-218ENST00000473222 KCNQ3O43525 872 aa23.17■■□□□ 1.3
NR1H3-218ENST00000473222 LOC102724428A0A0B4J2F2 783 aa23.16■■□□□ 1.3
NR1H3-218ENST00000473222 SIK1P57059 783 aa23.16■■□□□ 1.3
NR1H3-218ENST00000473222 GNAI1P63096 354 aa23.16■■□□□ 1.3
NR1H3-218ENST00000473222 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
NR1H3-218ENST00000473222 IFT57Q9NWB7 429 aa23.16■■□□□ 1.3
NR1H3-218ENST00000473222 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
NR1H3-218ENST00000473222 SLC4A9Q96Q91 983 aa23.15■■□□□ 1.3
NR1H3-218ENST00000473222 RBM42Q9BTD8 480 aaKnown RBP23.15■■□□□ 1.3
NR1H3-218ENST00000473222 LRRC4BQ9NT99 713 aa23.15■■□□□ 1.3
NR1H3-218ENST00000473222 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
NR1H3-218ENST00000473222 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
NR1H3-218ENST00000473222 VSIG10Q8N0Z9 540 aa23.14■■□□□ 1.29
NR1H3-218ENST00000473222 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
NR1H3-218ENST00000473222 TSPYL4Q9UJ04 414 aa23.14■■□□□ 1.29
NR1H3-218ENST00000473222 CCNL1Q9UK58 526 aaPredicted RBP23.14■■□□□ 1.29
NR1H3-218ENST00000473222 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
NR1H3-218ENST00000473222 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
NR1H3-218ENST00000473222 UBR2Q8IWV8 1755 aa23.12■■□□□ 1.29
NR1H3-218ENST00000473222 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
NR1H3-218ENST00000473222 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
NR1H3-218ENST00000473222 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
NR1H3-218ENST00000473222 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
NR1H3-218ENST00000473222 ZNF831Q5JPB2 1677 aa23.12■■□□□ 1.29
NR1H3-218ENST00000473222 KCPQ6ZWJ8 1503 aa23.11■■□□□ 1.29
NR1H3-218ENST00000473222 KCNQ4P56696 695 aa23.1■■□□□ 1.29
NR1H3-218ENST00000473222 MBIPQ9NS73 344 aa23.1■■□□□ 1.29
NR1H3-218ENST00000473222 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
NR1H3-218ENST00000473222 ITPK1Q13572 414 aa23.09■■□□□ 1.29
NR1H3-218ENST00000473222 TEX13AQ9BXU3 409 aaPredicted RBP23.09■■□□□ 1.29
NR1H3-218ENST00000473222 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
NR1H3-218ENST00000473222 SPINK5Q9NQ38 1064 aaPredicted RBP23.08■■□□□ 1.29
NR1H3-218ENST00000473222 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.28
NR1H3-218ENST00000473222 RREB1Q92766 1687 aa23.07■■□□□ 1.28
NR1H3-218ENST00000473222 SNRPA1P09661 255 aaKnown RBP23.07■■□□□ 1.28
NR1H3-218ENST00000473222 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
NR1H3-218ENST00000473222 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
NR1H3-218ENST00000473222 SLFN5Q08AF3 891 aa23.05■■□□□ 1.28
NR1H3-218ENST00000473222 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
NR1H3-218ENST00000473222 LINC00116Q8NCU8 138 aa23.04■■□□□ 1.28
NR1H3-218ENST00000473222 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
NR1H3-218ENST00000473222 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
NR1H3-218ENST00000473222 E9PSI1 815 aa23.03■■□□□ 1.28
NR1H3-218ENST00000473222 CYP19A1P11511 503 aaPredicted RBP23.03■■□□□ 1.28
NR1H3-218ENST00000473222 NBPF14Q5TI25 921 aa23.03■■□□□ 1.28
NR1H3-218ENST00000473222 TRMT2AQ8IZ69 625 aaKnown RBP23.03■■□□□ 1.28
NR1H3-218ENST00000473222 TSR2Q969E8 191 aaKnown RBP23.03■■□□□ 1.28
NR1H3-218ENST00000473222 CICQ96RK0 1608 aaPredicted RBP23.03■■□□□ 1.28
NR1H3-218ENST00000473222 NUP188Q5SRE5 1749 aa23.02■■□□□ 1.28
NR1H3-218ENST00000473222 MYH14Q7Z406 1995 aaKnown RBP23.02■■□□□ 1.28
NR1H3-218ENST00000473222 STARD3NLO95772 234 aa23.02■■□□□ 1.28
NR1H3-218ENST00000473222 AKT1S1Q96B36 256 aa23.02■■□□□ 1.28
NR1H3-218ENST00000473222 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
NR1H3-218ENST00000473222 ZBED9Q6R2W3 1325 aa23.02■■□□□ 1.28
NR1H3-218ENST00000473222 PRAMEF22A3QJZ6 481 aa23.01■■□□□ 1.27
NR1H3-218ENST00000473222 TJP1Q07157 1748 aa23.01■■□□□ 1.27
NR1H3-218ENST00000473222 C5P01031 1676 aa23■■□□□ 1.27
NR1H3-218ENST00000473222 KRT24Q2M2I5 525 aa23■■□□□ 1.27
NR1H3-218ENST00000473222 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
NR1H3-218ENST00000473222 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
NR1H3-218ENST00000473222 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
NR1H3-218ENST00000473222 HOXB7P09629 217 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms