RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 TLR1Q15399 786 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 CDCA8Q53HL2 280 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 CNKSR1Q969H4 720 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 XAGE2Q96GT9 111 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 SLC4A9Q96Q91 983 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
CLCC1-208ENST00000473062 ADD1P35611 737 aaKnown RBP6.27□□□□□ -1.41
CLCC1-208ENST00000473062 SMTNP53814 917 aa6.27□□□□□ -1.41
CLCC1-208ENST00000473062 SLC27A3Q5K4L6 730 aa6.27□□□□□ -1.41
CLCC1-208ENST00000473062 KCTD17Q8N5Z5 321 aa6.27□□□□□ -1.41
CLCC1-208ENST00000473062 CLP1Q92989 425 aaKnown RBP6.27□□□□□ -1.41
CLCC1-208ENST00000473062 POLMQ9NP87 494 aaPredicted RBP6.27□□□□□ -1.41
CLCC1-208ENST00000473062 ZNF358Q9NW07 568 aa6.27□□□□□ -1.41
CLCC1-208ENST00000473062 ZBTB7BO15156 539 aaPredicted RBP6.26□□□□□ -1.41
CLCC1-208ENST00000473062 SCNN1DP51172 638 aa6.26□□□□□ -1.41
CLCC1-208ENST00000473062 TMEM214Q6NUQ4 689 aaKnown RBP6.26□□□□□ -1.41
CLCC1-208ENST00000473062 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
CLCC1-208ENST00000473062 ZSCAN10Q96SZ4 725 aaPredicted RBP6.26□□□□□ -1.41
CLCC1-208ENST00000473062 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
CLCC1-208ENST00000473062 ETNK1Q9HBU6 452 aa6.26□□□□□ -1.41
CLCC1-208ENST00000473062 A6NJY4 79 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 TMEM229AB2RXF0 380 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 CDK2AP1O14519 115 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 RNF144AP50876 292 aaPredicted RBP6.25□□□□□ -1.41
CLCC1-208ENST00000473062 WDR44Q5JSH3 913 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 TMEM164Q5U3C3 297 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 AGBL1Q96MI9 1066 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 NIFKQ9BYG3 293 aaKnown RBP6.25□□□□□ -1.41
CLCC1-208ENST00000473062 ZMIZ1Q9ULJ6 1067 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 KIAA1024Q9UPX6 916 aa6.25□□□□□ -1.41
CLCC1-208ENST00000473062 TTLL8A6PVC2 850 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 SFI1A8K8P3 1242 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 FOXO3O43524 673 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
CLCC1-208ENST00000473062 BRD1O95696 1058 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 IGFBP4P22692 258 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 MTFR1Q15390 333 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 Q6ZNB5 142 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 STAG2Q8N3U4 1231 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLCC1-208ENST00000473062 STK32AQ8WU08 396 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 RAB6BQ9NRW1 208 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 SCHIP1Q9P0W5 487 aaPredicted RBP6.24□□□□□ -1.41
CLCC1-208ENST00000473062 SERTAD1Q9UHV2 236 aa6.24□□□□□ -1.41
CLCC1-208ENST00000473062 IL2RAP01589 272 aa6.23□□□□□ -1.41
CLCC1-208ENST00000473062 PSMA6P60900 246 aaKnown RBP6.23□□□□□ -1.41
CLCC1-208ENST00000473062 CENPCQ03188 943 aa6.23□□□□□ -1.41
CLCC1-208ENST00000473062 HIF1AQ16665 826 aa6.23□□□□□ -1.41
CLCC1-208ENST00000473062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.23□□□□□ -1.41
CLCC1-208ENST00000473062 NBPF1Q3BBV0 1214 aa6.23□□□□□ -1.41
CLCC1-208ENST00000473062 PPARGC1BQ86YN6 1023 aaKnown RBP6.23□□□□□ -1.41
CLCC1-208ENST00000473062 RHBDD1Q8TEB9 315 aa6.23□□□□□ -1.41
CLCC1-208ENST00000473062 INSM2Q96T92 566 aaPredicted RBP6.23□□□□□ -1.41
CLCC1-208ENST00000473062 ZNF395Q9H8N7 513 aaPredicted RBP6.23□□□□□ -1.41
CLCC1-208ENST00000473062 ATP13A2Q9NQ11 1180 aa6.23□□□□□ -1.41
CLCC1-208ENST00000473062 MAN1A2O60476 641 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 DKK1O94907 266 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 ATP2B4P23634 1241 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 KCNA1Q09470 495 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 TAS1R3Q7RTX0 852 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 LYSMD3Q7Z3D4 306 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 TSEN2Q8NCE0 465 aaKnown RBP6.22□□□□□ -1.41
CLCC1-208ENST00000473062 C1orf216Q8TAB5 229 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 COL26A1Q96A83 441 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 PURBQ96QR8 312 aaKnown RBP6.22□□□□□ -1.41
CLCC1-208ENST00000473062 AAASQ9NRG9 546 aa6.22□□□□□ -1.41
CLCC1-208ENST00000473062 GPC6Q9Y625 555 aaPredicted RBP6.22□□□□□ -1.41
CLCC1-208ENST00000473062 TMEM88BA6NKF7 163 aa6.21□□□□□ -1.42
CLCC1-208ENST00000473062 SPATA31C2B4DYI2 1134 aa6.21□□□□□ -1.42
CLCC1-208ENST00000473062 PPP1R12BO60237 982 aaPredicted RBP6.21□□□□□ -1.42
CLCC1-208ENST00000473062 SLC9A9Q8IVB4 645 aa6.21□□□□□ -1.42
CLCC1-208ENST00000473062 CCER1Q8TC90 406 aaPredicted RBP6.21□□□□□ -1.42
CLCC1-208ENST00000473062 HRH3Q9Y5N1 445 aa6.21□□□□□ -1.42
CLCC1-208ENST00000473062 ZBTB7CA1YPR0 619 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 SERTM1A2A2V5 107 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 BMP1P13497 986 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 TATP17735 454 aaPredicted RBP6.2□□□□□ -1.42
CLCC1-208ENST00000473062 WEE1P30291 646 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
CLCC1-208ENST00000473062 EPHA4P54764 986 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 FOXK2Q01167 660 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 TNS4Q8IZW8 715 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 KDF1Q8NAX2 398 aaPredicted RBP6.2□□□□□ -1.42
CLCC1-208ENST00000473062 SCG3Q8WXD2 468 aaKnown RBP6.2□□□□□ -1.42
CLCC1-208ENST00000473062 FHDC1Q9C0D6 1143 aaPredicted RBP6.2□□□□□ -1.42
CLCC1-208ENST00000473062 GRIP2Q9C0E4 1043 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 CABP1Q9NZU7 370 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 ZNF232Q9UNY5 417 aa6.2□□□□□ -1.42
CLCC1-208ENST00000473062 SOS2Q07890 1332 aaPredicted RBP6.2□□□□□ -1.42
CLCC1-208ENST00000473062 ATAD2Q6PL18 1390 aa6.19□□□□□ -1.42
CLCC1-208ENST00000473062 A0A1B0GTH6 734 aa6.19□□□□□ -1.42
CLCC1-208ENST00000473062 ARID4AP29374 1257 aaPredicted RBP6.19□□□□□ -1.42
CLCC1-208ENST00000473062 TEAD4Q15561 434 aa6.19□□□□□ -1.42
CLCC1-208ENST00000473062 RNF217Q8TC41 542 aa6.19□□□□□ -1.42
CLCC1-208ENST00000473062 ZFP42Q96MM3 310 aa6.19□□□□□ -1.42
CLCC1-208ENST00000473062 CXXC1Q9P0U4 656 aaPredicted RBP6.19□□□□□ -1.42
CLCC1-208ENST00000473062 ST8SIA5O15466 376 aa6.18□□□□□ -1.42
CLCC1-208ENST00000473062 PRMT3O60678 531 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms