RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 SIN3AQ96ST3 1273 aa8.9□□□□□ -0.98
CFHR1-204ENST00000472961 KDM6AO15550 1401 aaPredicted RBP8.89□□□□□ -0.99
CFHR1-204ENST00000472961 HSPA1AP0DMV8 641 aaKnown RBP8.89□□□□□ -0.99
CFHR1-204ENST00000472961 HSPA1BP0DMV9 641 aaKnown RBP8.89□□□□□ -0.99
CFHR1-204ENST00000472961 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
CFHR1-204ENST00000472961 BCS1LQ9Y276 419 aa8.89□□□□□ -0.99
CFHR1-204ENST00000472961 SCN11AQ9UI33 1791 aa8.89□□□□□ -0.99
CFHR1-204ENST00000472961 RTL1A6NKG5 1358 aa8.88□□□□□ -0.99
CFHR1-204ENST00000472961 SSFA2P28290 1259 aa8.88□□□□□ -0.99
CFHR1-204ENST00000472961 FLAD1Q8NFF5 587 aa8.88□□□□□ -0.99
CFHR1-204ENST00000472961 AK7Q96M32 723 aa8.88□□□□□ -0.99
CFHR1-204ENST00000472961 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
CFHR1-204ENST00000472961 LOC102724428A0A0B4J2F2 783 aa8.87□□□□□ -0.99
CFHR1-204ENST00000472961 SIK1P57059 783 aa8.87□□□□□ -0.99
CFHR1-204ENST00000472961 HSP90AB2PQ58FF8 381 aa8.87□□□□□ -0.99
CFHR1-204ENST00000472961 ARHGAP27Q6ZUM4 889 aa8.87□□□□□ -0.99
CFHR1-204ENST00000472961 TMC1Q8TDI8 760 aa8.87□□□□□ -0.99
CFHR1-204ENST00000472961 RRAGCQ9HB90 399 aa8.87□□□□□ -0.99
CFHR1-204ENST00000472961 ARFGEF2Q9Y6D5 1785 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 PCDH11YQ9BZA8 1340 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 GNPATO15228 680 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 FSTL1Q12841 308 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 DCAF5Q96JK2 942 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 ADAMTSL1Q8N6G6 1762 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
CFHR1-204ENST00000472961 POTECB2RU33 542 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 GYS1P13807 737 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 AMPHP49418 695 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 TGFB2P61812 414 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 DDR1Q08345 913 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
CFHR1-204ENST00000472961 TESK2Q96S53 571 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 INSRP06213 1382 aa8.85□□□□□ -0.99
CFHR1-204ENST00000472961 CGNL1Q0VF96 1302 aa8.84□□□□□ -0.99
CFHR1-204ENST00000472961 FCHSD2O94868 740 aa8.84□□□□□ -0.99
CFHR1-204ENST00000472961 RASSF7Q02833 373 aa8.84□□□□□ -0.99
CFHR1-204ENST00000472961 HDGFL2Q7Z4V5 671 aaPredicted RBP8.84□□□□□ -0.99
CFHR1-204ENST00000472961 ATG3Q9NT62 314 aa8.84□□□□□ -0.99
CFHR1-204ENST00000472961 SLX4Q8IY92 1834 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 FYB1O15117 783 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 CHRNA5P30532 468 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 ARHGEF1Q92888 912 aaKnown RBP8.83□□□□□ -1
CFHR1-204ENST00000472961 GGNBP2Q9H3C7 697 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 RNF181Q9P0P0 153 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 UBR2Q8IWV8 1755 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 THSD7BQ9C0I4 1608 aa8.83□□□□□ -1
CFHR1-204ENST00000472961 TATP17735 454 aaPredicted RBP8.82□□□□□ -1
CFHR1-204ENST00000472961 RAPGEF4Q8WZA2 1011 aa8.82□□□□□ -1
CFHR1-204ENST00000472961 SMARCC1Q92922 1105 aaPredicted RBP8.82□□□□□ -1
CFHR1-204ENST00000472961 COG3Q96JB2 828 aa8.82□□□□□ -1
CFHR1-204ENST00000472961 SRP68Q9UHB9 627 aaKnown RBP8.82□□□□□ -1
CFHR1-204ENST00000472961 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
CFHR1-204ENST00000472961 FOXN1O15353 648 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 POTEIP0CG38 1075 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 POTEJP0CG39 1038 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 ATP6V1AP38606 617 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 FKBP8Q14318 412 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 TERF2IPQ9NYB0 399 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 SCN4AP35499 1836 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 FLT4P35916 1363 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 TONSLQ96HA7 1378 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 SCN7AQ01118 1682 aa8.81□□□□□ -1
CFHR1-204ENST00000472961 SMC1BQ8NDV3 1235 aa8.8□□□□□ -1
CFHR1-204ENST00000472961 SMG6Q86US8 1419 aaKnown RBP8.8□□□□□ -1
CFHR1-204ENST00000472961 PHKG2P15735 406 aa8.79□□□□□ -1
CFHR1-204ENST00000472961 TMF1P82094 1093 aa8.79□□□□□ -1
CFHR1-204ENST00000472961 LTBP1Q14766 1721 aa8.79□□□□□ -1
CFHR1-204ENST00000472961 KDM2BQ8NHM5 1336 aa8.79□□□□□ -1
CFHR1-204ENST00000472961 CNTNAP4Q9C0A0 1308 aa8.79□□□□□ -1
CFHR1-204ENST00000472961 BCORQ6W2J9 1755 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 NFKBIEO00221 500 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 C16orf71Q8IYS4 520 aaPredicted RBP8.78□□□□□ -1
CFHR1-204ENST00000472961 NLGN1Q8N2Q7 840 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 PUS7Q96PZ0 661 aaKnown RBP8.78□□□□□ -1
CFHR1-204ENST00000472961 EYA1Q99502 592 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 CCDC87Q9NVE4 849 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 PIM2Q9P1W9 311 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 TRPM7Q96QT4 1865 aa8.78□□□□□ -1
CFHR1-204ENST00000472961 SIPA1L3O60292 1781 aaPredicted RBP8.78□□□□□ -1
CFHR1-204ENST00000472961 USP42Q9H9J4 1324 aaKnown RBP8.78□□□□□ -1
CFHR1-204ENST00000472961 CASP8AP2Q9UKL3 1982 aa8.77□□□□□ -1
CFHR1-204ENST00000472961 GLTPD2A6NH11 291 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 POLRMTO00411 1230 aaKnown RBP8.77□□□□□ -1.01
CFHR1-204ENST00000472961 RPS6KA4O75676 772 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 NEUROD1Q13562 356 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 DALRD3Q5D0E6 543 aaKnown RBP8.77□□□□□ -1.01
CFHR1-204ENST00000472961 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 CARD14Q9BXL6 1004 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 TMOD3Q9NYL9 352 aa8.77□□□□□ -1.01
CFHR1-204ENST00000472961 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
CFHR1-204ENST00000472961 RTCBQ9Y3I0 505 aaKnown RBP8.77□□□□□ -1.01
CFHR1-204ENST00000472961 KIF24Q5T7B8 1368 aa8.76□□□□□ -1.01
CFHR1-204ENST00000472961 ST20-MTHFSA0A0A6YYL1 179 aa8.76□□□□□ -1.01
CFHR1-204ENST00000472961 TM4SF1P30408 202 aa8.76□□□□□ -1.01
CFHR1-204ENST00000472961 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
CFHR1-204ENST00000472961 RC3H1Q5TC82 1133 aaKnown RBP8.76□□□□□ -1.01
CFHR1-204ENST00000472961 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms