RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PHKG2P15735 406 aa18.65■□□□□ 0.58
HIF3A-206ENST00000472815 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
HIF3A-206ENST00000472815 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
HIF3A-206ENST00000472815 MIS18AQ9NYP9 233 aa18.65■□□□□ 0.58
HIF3A-206ENST00000472815 PANK1Q8TE04 598 aa18.64■□□□□ 0.57
HIF3A-206ENST00000472815 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
HIF3A-206ENST00000472815 NRAPQ86VF7 1730 aa18.64■□□□□ 0.57
HIF3A-206ENST00000472815 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-206ENST00000472815 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
HIF3A-206ENST00000472815 BTBD11A6QL63 1104 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 TRIM27P14373 513 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
HIF3A-206ENST00000472815 DCAF5Q96JK2 942 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 C8orf37Q96NL8 207 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 COG6Q9Y2V7 657 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 ZCRB1Q8TBF4 217 aaKnown RBP18.63■□□□□ 0.57
HIF3A-206ENST00000472815 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 STK31Q9BXU1 1019 aa18.63■□□□□ 0.57
HIF3A-206ENST00000472815 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
HIF3A-206ENST00000472815 SLIT2O94813 1529 aa18.62■□□□□ 0.57
HIF3A-206ENST00000472815 HOXB7P09629 217 aa18.62■□□□□ 0.57
HIF3A-206ENST00000472815 MVPQ14764 893 aaKnown RBP18.62■□□□□ 0.57
HIF3A-206ENST00000472815 CCDC30Q5VVM6 783 aa18.62■□□□□ 0.57
HIF3A-206ENST00000472815 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
HIF3A-206ENST00000472815 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
HIF3A-206ENST00000472815 PTPRCP08575 1304 aa18.6■□□□□ 0.57
HIF3A-206ENST00000472815 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
HIF3A-206ENST00000472815 FNBP4Q8N3X1 1017 aaPredicted RBP18.6■□□□□ 0.57
HIF3A-206ENST00000472815 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
HIF3A-206ENST00000472815 MRC1P22897 1456 aa18.59■□□□□ 0.57
HIF3A-206ENST00000472815 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
HIF3A-206ENST00000472815 CYP27B1O15528 508 aa18.58■□□□□ 0.57
HIF3A-206ENST00000472815 RLBP1P12271 317 aa18.58■□□□□ 0.57
HIF3A-206ENST00000472815 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.57
HIF3A-206ENST00000472815 EIF4A1P60842 406 aaKnown RBP18.57■□□□□ 0.56
HIF3A-206ENST00000472815 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
HIF3A-206ENST00000472815 AFF2P51816 1311 aa18.56■□□□□ 0.56
HIF3A-206ENST00000472815 BCL9LQ86UU0 1499 aa18.56■□□□□ 0.56
HIF3A-206ENST00000472815 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
HIF3A-206ENST00000472815 UNC5CLQ8IV45 518 aa18.56■□□□□ 0.56
HIF3A-206ENST00000472815 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
HIF3A-206ENST00000472815 WNK3Q9BYP7 1800 aa18.55■□□□□ 0.56
HIF3A-206ENST00000472815 TCERG1O14776 1098 aaKnown RBP18.55■□□□□ 0.56
HIF3A-206ENST00000472815 CENPQQ7L2Z9 268 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-206ENST00000472815 USP21Q9UK80 565 aa18.55■□□□□ 0.56
HIF3A-206ENST00000472815 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
HIF3A-206ENST00000472815 SHANK3Q9BYB0 1731 aa18.55■□□□□ 0.56
HIF3A-206ENST00000472815 CABP4P57796 275 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 HDGFL1Q5TGJ6 251 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 TNNQ9UQP3 1299 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 ABCC4O15439 1325 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 ERVV-2B6SEH9 535 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 NKX1-1Q15270 411 aaPredicted RBP18.54■□□□□ 0.56
HIF3A-206ENST00000472815 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 TMEM57Q8N5G2 664 aa18.54■□□□□ 0.56
HIF3A-206ENST00000472815 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
HIF3A-206ENST00000472815 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
HIF3A-206ENST00000472815 DISP2A7MBM2 1401 aa18.52■□□□□ 0.55
HIF3A-206ENST00000472815 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.55
HIF3A-206ENST00000472815 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
HIF3A-206ENST00000472815 VPS72Q15906 364 aa18.5■□□□□ 0.55
HIF3A-206ENST00000472815 HEG1Q9ULI3 1381 aa18.5■□□□□ 0.55
HIF3A-206ENST00000472815 EXOC5O00471 708 aa18.49■□□□□ 0.55
HIF3A-206ENST00000472815 TRPC5Q9UL62 973 aaPredicted RBP18.49■□□□□ 0.55
HIF3A-206ENST00000472815 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
HIF3A-206ENST00000472815 RWDD1Q9H446 243 aaPredicted RBP18.49■□□□□ 0.55
HIF3A-206ENST00000472815 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
HIF3A-206ENST00000472815 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
HIF3A-206ENST00000472815 ATRNO75882 1429 aa18.48■□□□□ 0.55
HIF3A-206ENST00000472815 KCNQ3O43525 872 aa18.48■□□□□ 0.55
HIF3A-206ENST00000472815 EIF2S2P20042 333 aaKnown RBP18.48■□□□□ 0.55
HIF3A-206ENST00000472815 FLIIQ13045 1269 aa18.48■□□□□ 0.55
HIF3A-206ENST00000472815 INTS3Q68E01 1043 aaKnown RBP18.48■□□□□ 0.55
HIF3A-206ENST00000472815 FMNL2Q96PY5 1086 aa18.48■□□□□ 0.55
HIF3A-206ENST00000472815 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
HIF3A-206ENST00000472815 SPATA31A5Q5VU36 1347 aa18.47■□□□□ 0.55
HIF3A-206ENST00000472815 TNS2Q63HR2 1409 aa18.47■□□□□ 0.55
HIF3A-206ENST00000472815 SPATA31A7Q8IWB4 1347 aa18.47■□□□□ 0.55
HIF3A-206ENST00000472815 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
HIF3A-206ENST00000472815 CCT4P50991 539 aaKnown RBP18.46■□□□□ 0.55
HIF3A-206ENST00000472815 FKBP5Q13451 457 aaPredicted RBP18.46■□□□□ 0.55
HIF3A-206ENST00000472815 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
HIF3A-206ENST00000472815 QTRT2Q9H974 415 aaKnown RBP18.46■□□□□ 0.55
HIF3A-206ENST00000472815 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
HIF3A-206ENST00000472815 RGS12O14924 1447 aa18.46■□□□□ 0.55
HIF3A-206ENST00000472815 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
HIF3A-206ENST00000472815 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
HIF3A-206ENST00000472815 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
HIF3A-206ENST00000472815 SLC39A6Q13433 755 aa18.44■□□□□ 0.54
HIF3A-206ENST00000472815 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
HIF3A-206ENST00000472815 GLI3P10071 1580 aa18.44■□□□□ 0.54
HIF3A-206ENST00000472815 N4BP2Q86UW6 1770 aaPredicted RBP18.44■□□□□ 0.54
HIF3A-206ENST00000472815 PAPPAQ13219 1627 aa18.44■□□□□ 0.54
HIF3A-206ENST00000472815 ZBTB7BO15156 539 aaPredicted RBP18.43■□□□□ 0.54
HIF3A-206ENST00000472815 GJD4Q96KN9 370 aaPredicted RBP18.43■□□□□ 0.54
HIF3A-206ENST00000472815 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
HIF3A-206ENST00000472815 CHPF2Q9P2E5 772 aa18.43■□□□□ 0.54
HIF3A-206ENST00000472815 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
HIF3A-206ENST00000472815 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
HIF3A-206ENST00000472815 DDB1Q16531 1140 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms