RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 TRMT2AQ8IZ69 625 aaKnown RBP7.62□□□□□ -1.19
EPHA4-212ENST00000472696 GLI3P10071 1580 aa7.62□□□□□ -1.19
EPHA4-212ENST00000472696 SHANK3Q9BYB0 1731 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 LRRC37A3O60309 1634 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 RNMTO43148 476 aaKnown RBP7.61□□□□□ -1.19
EPHA4-212ENST00000472696 ZNF853P0CG23 659 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 SLFN5Q08AF3 891 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 TEFQ10587 303 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 ILDR1Q86SU0 546 aaPredicted RBP7.61□□□□□ -1.19
EPHA4-212ENST00000472696 IL17REQ8NFR9 667 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 VIRMAQ69YN4 1812 aaKnown RBP7.61□□□□□ -1.19
EPHA4-212ENST00000472696 MRC1P22897 1456 aa7.61□□□□□ -1.19
EPHA4-212ENST00000472696 CHL1O00533 1208 aa7.6□□□□□ -1.19
EPHA4-212ENST00000472696 FAM98CQ17RN3 349 aaKnown RBP7.6□□□□□ -1.19
EPHA4-212ENST00000472696 SLC52A2Q9HAB3 445 aa7.6□□□□□ -1.19
EPHA4-212ENST00000472696 RRP7AQ9Y3A4 280 aaKnown RBP7.6□□□□□ -1.19
EPHA4-212ENST00000472696 HOXB7P09629 217 aa7.59□□□□□ -1.19
EPHA4-212ENST00000472696 CABP4P57796 275 aa7.59□□□□□ -1.19
EPHA4-212ENST00000472696 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
EPHA4-212ENST00000472696 YTHDC1Q96MU7 727 aaKnown RBP7.59□□□□□ -1.19
EPHA4-212ENST00000472696 SIPA1L3O60292 1781 aaPredicted RBP7.59□□□□□ -1.2
EPHA4-212ENST00000472696 BTBD11A6QL63 1104 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 DUSP27Q5VZP5 1158 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 MPRIPQ6WCQ1 1025 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 FAM196AQ6ZSG2 479 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 MCM10Q7L590 875 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 KRT27Q7Z3Y8 459 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 SEPT12Q8IYM1 358 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 LGR6Q9HBX8 967 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 TSPYL4Q9UJ04 414 aa7.58□□□□□ -1.2
EPHA4-212ENST00000472696 KDM6AO15550 1401 aaPredicted RBP7.58□□□□□ -1.2
EPHA4-212ENST00000472696 A0A0G2JS52 829 aa7.57□□□□□ -1.2
EPHA4-212ENST00000472696 MARCH10Q8NA82 808 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-212ENST00000472696 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-212ENST00000472696 TEX13AQ9BXU3 409 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-212ENST00000472696 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
EPHA4-212ENST00000472696 RGS17Q9UGC6 210 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-212ENST00000472696 SALL2Q9Y467 1007 aaPredicted RBP7.57□□□□□ -1.2
EPHA4-212ENST00000472696 FANCIQ9NVI1 1328 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 DCTN1Q14203 1278 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 ALDH1L2Q3SY69 923 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 ZNF790Q6PG37 636 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 TTC5Q8N0Z6 440 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 NFATC2IPQ8NCF5 419 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 MBIPQ9NS73 344 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 KDM3BQ7LBC6 1761 aa7.56□□□□□ -1.2
EPHA4-212ENST00000472696 CACNA1FO60840 1977 aa7.55□□□□□ -1.2
EPHA4-212ENST00000472696 ITGB4P16144 1822 aa7.55□□□□□ -1.2
EPHA4-212ENST00000472696 ZNF831Q5JPB2 1677 aa7.55□□□□□ -1.2
EPHA4-212ENST00000472696 BRPF1P55201 1214 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-212ENST00000472696 CDCA7LQ96GN5 454 aa7.55□□□□□ -1.2
EPHA4-212ENST00000472696 FMNL2Q96PY5 1086 aa7.55□□□□□ -1.2
EPHA4-212ENST00000472696 BCL11BQ9C0K0 894 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-212ENST00000472696 HEG1Q9ULI3 1381 aa7.55□□□□□ -1.2
EPHA4-212ENST00000472696 NHSQ6T4R5 1651 aa7.54□□□□□ -1.2
EPHA4-212ENST00000472696 PAPPAQ13219 1627 aa7.54□□□□□ -1.2
EPHA4-212ENST00000472696 SNRPA1P09661 255 aaKnown RBP7.54□□□□□ -1.2
EPHA4-212ENST00000472696 EIF4A1P60842 406 aaKnown RBP7.54□□□□□ -1.2
EPHA4-212ENST00000472696 TWISTNBQ3B726 338 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-212ENST00000472696 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
EPHA4-212ENST00000472696 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
EPHA4-212ENST00000472696 THUMPD2Q9BTF0 503 aaKnown RBP7.54□□□□□ -1.2
EPHA4-212ENST00000472696 SPINK5Q9NQ38 1064 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-212ENST00000472696 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
EPHA4-212ENST00000472696 SBF2Q86WG5 1849 aa7.54□□□□□ -1.2
EPHA4-212ENST00000472696 UBR2Q8IWV8 1755 aa7.54□□□□□ -1.2
EPHA4-212ENST00000472696 ERBB4Q15303 1308 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 CICQ96RK0 1608 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-212ENST00000472696 DOT1LQ8TEK3 1739 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 TOGARAM1Q9Y4F4 1720 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 BRWD3Q6RI45 1802 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 PLSCR1O15162 318 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 VAMP4O75379 141 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-212ENST00000472696 MS4A1P11836 297 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 PRIM1P49642 420 aaKnown RBP7.53□□□□□ -1.2
EPHA4-212ENST00000472696 EXOSC9Q06265 439 aaKnown RBP7.53□□□□□ -1.2
EPHA4-212ENST00000472696 NBR1Q14596 966 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 CCDC30Q5VVM6 783 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-212ENST00000472696 PIGBQ92521 554 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-212ENST00000472696 KAT6BQ8WYB5 2073 aa7.53□□□□□ -1.2
EPHA4-212ENST00000472696 RGS12O14924 1447 aa7.52□□□□□ -1.2
EPHA4-212ENST00000472696 TSR2Q969E8 191 aaKnown RBP7.52□□□□□ -1.21
EPHA4-212ENST00000472696 ATG3Q9NT62 314 aa7.52□□□□□ -1.21
EPHA4-212ENST00000472696 RCAN3Q9UKA8 241 aa7.52□□□□□ -1.21
EPHA4-212ENST00000472696 IPO8O15397 1037 aaKnown RBP7.51□□□□□ -1.21
EPHA4-212ENST00000472696 STARD3NLO95772 234 aa7.51□□□□□ -1.21
EPHA4-212ENST00000472696 SLC27A3Q5K4L6 730 aa7.51□□□□□ -1.21
EPHA4-212ENST00000472696 ARHGAP45Q92619 1136 aa7.51□□□□□ -1.21
EPHA4-212ENST00000472696 SYTL4Q96C24 671 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-212ENST00000472696 STK31Q9BXU1 1019 aa7.51□□□□□ -1.21
EPHA4-212ENST00000472696 DBF4Q9UBU7 674 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-212ENST00000472696 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
EPHA4-212ENST00000472696 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
EPHA4-212ENST00000472696 KIF16BQ96L93 1317 aa7.51□□□□□ -1.21
EPHA4-212ENST00000472696 RGL2O15211 777 aa7.5□□□□□ -1.21
EPHA4-212ENST00000472696 RARSP54136 660 aaKnown RBP7.5□□□□□ -1.21
EPHA4-212ENST00000472696 C8orf58Q8NAV2 365 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms