RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 PELP1Q8IZL8 1130 aaKnown RBP22.96■■□□□ 1.27
PKD1-208ENST00000472577 PHKG2P15735 406 aa22.95■■□□□ 1.26
PKD1-208ENST00000472577 PRKAR2BP31323 418 aa22.95■■□□□ 1.26
PKD1-208ENST00000472577 CCDC184Q52MB2 194 aa22.95■■□□□ 1.26
PKD1-208ENST00000472577 MSL1Q68DK7 614 aa22.94■■□□□ 1.26
PKD1-208ENST00000472577 ZNF530Q6P9A1 599 aaPredicted RBP22.94■■□□□ 1.26
PKD1-208ENST00000472577 IFNL2Q8IZJ0 200 aa22.94■■□□□ 1.26
PKD1-208ENST00000472577 FCHSD2O94868 740 aa22.93■■□□□ 1.26
PKD1-208ENST00000472577 NKX1-1Q15270 411 aaPredicted RBP22.93■■□□□ 1.26
PKD1-208ENST00000472577 ITGB4P16144 1822 aa22.93■■□□□ 1.26
PKD1-208ENST00000472577 MSH5O43196 834 aa22.92■■□□□ 1.26
PKD1-208ENST00000472577 MTHFSDQ2M296 383 aaKnown RBP22.92■■□□□ 1.26
PKD1-208ENST00000472577 PALLDQ8WX93 1383 aa22.91■■□□□ 1.26
PKD1-208ENST00000472577 YBX3P16989 372 aaKnown RBP eCLIP22.91■■□□□ 1.26
PKD1-208ENST00000472577 PHACTR3Q96KR7 559 aa22.91■■□□□ 1.26
PKD1-208ENST00000472577 C4BP0C0L5 1744 aa22.91■■□□□ 1.26
PKD1-208ENST00000472577 C1QTNF8P60827 252 aa22.9■■□□□ 1.26
PKD1-208ENST00000472577 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.25
PKD1-208ENST00000472577 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
PKD1-208ENST00000472577 AMIGO3Q86WK7 504 aa22.88■■□□□ 1.25
PKD1-208ENST00000472577 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
PKD1-208ENST00000472577 MPRIPQ6WCQ1 1025 aa22.87■■□□□ 1.25
PKD1-208ENST00000472577 PLEKHF1Q96S99 279 aa22.87■■□□□ 1.25
PKD1-208ENST00000472577 UBR3Q6ZT12 1888 aa22.86■■□□□ 1.25
PKD1-208ENST00000472577 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
PKD1-208ENST00000472577 AKAP4Q5JQC9 854 aa22.86■■□□□ 1.25
PKD1-208ENST00000472577 HSP90AB1P08238 724 aaKnown RBP22.85■■□□□ 1.25
PKD1-208ENST00000472577 GAS2L2Q8NHY3 880 aa22.85■■□□□ 1.25
PKD1-208ENST00000472577 DCAF5Q96JK2 942 aa22.85■■□□□ 1.25
PKD1-208ENST00000472577 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
PKD1-208ENST00000472577 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
PKD1-208ENST00000472577 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
PKD1-208ENST00000472577 SMIM5Q71RC9 77 aa22.84■■□□□ 1.25
PKD1-208ENST00000472577 SCN11AQ9UI33 1791 aa22.83■■□□□ 1.24
PKD1-208ENST00000472577 ADAMTS7Q9UKP4 1686 aa22.82■■□□□ 1.24
PKD1-208ENST00000472577 VIRMAQ69YN4 1812 aaKnown RBP22.81■■□□□ 1.24
PKD1-208ENST00000472577 GIGYF1O75420 1035 aaPredicted RBP22.81■■□□□ 1.24
PKD1-208ENST00000472577 PIGBQ92521 554 aa22.81■■□□□ 1.24
PKD1-208ENST00000472577 PNNQ9H307 717 aaKnown RBP22.81■■□□□ 1.24
PKD1-208ENST00000472577 LGR6Q9HBX8 967 aa22.81■■□□□ 1.24
PKD1-208ENST00000472577 CCDC146Q8IYE0 955 aa22.8■■□□□ 1.24
PKD1-208ENST00000472577 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
PKD1-208ENST00000472577 GNAT3A8MTJ3 354 aa22.79■■□□□ 1.24
PKD1-208ENST00000472577 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
PKD1-208ENST00000472577 RNMTO43148 476 aaKnown RBP22.79■■□□□ 1.24
PKD1-208ENST00000472577 NEFMP07197 916 aa22.79■■□□□ 1.24
PKD1-208ENST00000472577 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
PKD1-208ENST00000472577 PHF14O94880 888 aa22.78■■□□□ 1.24
PKD1-208ENST00000472577 AK7Q96M32 723 aa22.78■■□□□ 1.24
PKD1-208ENST00000472577 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
PKD1-208ENST00000472577 ATP10DQ9P241 1426 aa22.77■■□□□ 1.24
PKD1-208ENST00000472577 GRIN3BO60391 1043 aa22.77■■□□□ 1.24
PKD1-208ENST00000472577 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
PKD1-208ENST00000472577 SMARCC1Q92922 1105 aaPredicted RBP22.77■■□□□ 1.24
PKD1-208ENST00000472577 CD2APQ9Y5K6 639 aa22.77■■□□□ 1.24
PKD1-208ENST00000472577 DLG5Q8TDM6 1919 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 CABP4P57796 275 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 IL17REQ8NFR9 667 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 RUNDC1Q96C34 613 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 MRC1P22897 1456 aa22.76■■□□□ 1.23
PKD1-208ENST00000472577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.75■■□□□ 1.23
PKD1-208ENST00000472577 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
PKD1-208ENST00000472577 WWC3Q9ULE0 1092 aa22.74■■□□□ 1.23
PKD1-208ENST00000472577 LOC102724428A0A0B4J2F2 783 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 SIK1P57059 783 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 ITPK1Q13572 414 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 SLC52A2Q9HAB3 445 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 ASAP1Q9ULH1 1129 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 ADCY9O60503 1353 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 CEMIPQ8WUJ3 1361 aa22.73■■□□□ 1.23
PKD1-208ENST00000472577 HTATSF1O43719 755 aaKnown RBP22.71■■□□□ 1.23
PKD1-208ENST00000472577 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
PKD1-208ENST00000472577 DCTN1Q14203 1278 aa22.71■■□□□ 1.23
PKD1-208ENST00000472577 MCM10Q7L590 875 aa22.71■■□□□ 1.23
PKD1-208ENST00000472577 MIER1Q8N108 512 aa22.71■■□□□ 1.23
PKD1-208ENST00000472577 RTF1Q92541 710 aaKnown RBP22.71■■□□□ 1.23
PKD1-208ENST00000472577 ATG3Q9NT62 314 aa22.71■■□□□ 1.23
PKD1-208ENST00000472577 CCER2I3L3R5 266 aa22.7■■□□□ 1.22
PKD1-208ENST00000472577 SSFA2P28290 1259 aa22.7■■□□□ 1.22
PKD1-208ENST00000472577 RRP7AQ9Y3A4 280 aaKnown RBP22.7■■□□□ 1.22
PKD1-208ENST00000472577 SIPA1L3O60292 1781 aaPredicted RBP22.7■■□□□ 1.22
PKD1-208ENST00000472577 CEP350Q5VT06 3117 aa22.69■■□□□ 1.22
PKD1-208ENST00000472577 RIPK4P57078 832 aa22.69■■□□□ 1.22
PKD1-208ENST00000472577 KIAA1551Q9HCM1 1747 aa22.68■■□□□ 1.22
PKD1-208ENST00000472577 GNPATO15228 680 aa22.68■■□□□ 1.22
PKD1-208ENST00000472577 HMGB2P26583 209 aaKnown RBP22.67■■□□□ 1.22
PKD1-208ENST00000472577 TEFQ10587 303 aa22.67■■□□□ 1.22
PKD1-208ENST00000472577 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
PKD1-208ENST00000472577 APAF1O14727 1248 aa22.66■■□□□ 1.22
PKD1-208ENST00000472577 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
PKD1-208ENST00000472577 THUMPD2Q9BTF0 503 aaKnown RBP22.66■■□□□ 1.22
PKD1-208ENST00000472577 COL5A3P25940 1745 aaPredicted RBP22.65■■□□□ 1.22
PKD1-208ENST00000472577 CICQ96RK0 1608 aaPredicted RBP22.65■■□□□ 1.22
PKD1-208ENST00000472577 ATP6V1AP38606 617 aa22.65■■□□□ 1.22
PKD1-208ENST00000472577 KIF13BQ9NQT8 1826 aa22.64■■□□□ 1.22
PKD1-208ENST00000472577 SLC39A6Q13433 755 aa22.64■■□□□ 1.21
PKD1-208ENST00000472577 ZNF526Q8TF50 670 aaPredicted RBP22.64■■□□□ 1.21
PKD1-208ENST00000472577 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms