RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
UBE2F-220ENST00000472479 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
UBE2F-220ENST00000472479 E9PSI1 815 aa13.67□□□□□ -0.22
UBE2F-220ENST00000472479 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
UBE2F-220ENST00000472479 RGS12O14924 1447 aa13.66□□□□□ -0.22
UBE2F-220ENST00000472479 IL16Q14005 1332 aa13.66□□□□□ -0.22
UBE2F-220ENST00000472479 CDCA7LQ96GN5 454 aa13.66□□□□□ -0.22
UBE2F-220ENST00000472479 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
UBE2F-220ENST00000472479 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
UBE2F-220ENST00000472479 LRRC37A3O60309 1634 aa13.65□□□□□ -0.22
UBE2F-220ENST00000472479 KCNQ2O43526 872 aa13.65□□□□□ -0.22
UBE2F-220ENST00000472479 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
UBE2F-220ENST00000472479 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
UBE2F-220ENST00000472479 TRIM37O94972 964 aa13.64□□□□□ -0.23
UBE2F-220ENST00000472479 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
UBE2F-220ENST00000472479 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
UBE2F-220ENST00000472479 SF3B2Q13435 895 aaKnown RBP13.64□□□□□ -0.23
UBE2F-220ENST00000472479 PIGBQ92521 554 aa13.64□□□□□ -0.23
UBE2F-220ENST00000472479 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
UBE2F-220ENST00000472479 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
UBE2F-220ENST00000472479 THSD7AQ9UPZ6 1657 aa13.64□□□□□ -0.23
UBE2F-220ENST00000472479 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
UBE2F-220ENST00000472479 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
UBE2F-220ENST00000472479 BABAM1Q9NWV8 329 aa13.63□□□□□ -0.23
UBE2F-220ENST00000472479 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
UBE2F-220ENST00000472479 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
UBE2F-220ENST00000472479 CHL1O00533 1208 aa13.62□□□□□ -0.23
UBE2F-220ENST00000472479 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
UBE2F-220ENST00000472479 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
UBE2F-220ENST00000472479 MBIPQ9NS73 344 aa13.62□□□□□ -0.23
UBE2F-220ENST00000472479 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
UBE2F-220ENST00000472479 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
UBE2F-220ENST00000472479 BCL11BQ9C0K0 894 aaPredicted RBP13.61□□□□□ -0.23
UBE2F-220ENST00000472479 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
UBE2F-220ENST00000472479 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
UBE2F-220ENST00000472479 APBA3O96018 575 aa13.61□□□□□ -0.23
UBE2F-220ENST00000472479 CENPBP07199 599 aaPredicted RBP13.61□□□□□ -0.23
UBE2F-220ENST00000472479 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
UBE2F-220ENST00000472479 FMNL2Q96PY5 1086 aa13.61□□□□□ -0.23
UBE2F-220ENST00000472479 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
UBE2F-220ENST00000472479 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
UBE2F-220ENST00000472479 KCNQ3O43525 872 aa13.6□□□□□ -0.23
UBE2F-220ENST00000472479 ZNF853P0CG23 659 aa13.6□□□□□ -0.23
UBE2F-220ENST00000472479 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
UBE2F-220ENST00000472479 ATG3Q9NT62 314 aa13.6□□□□□ -0.23
UBE2F-220ENST00000472479 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
UBE2F-220ENST00000472479 PTF1AQ7RTS3 328 aa13.58□□□□□ -0.24
UBE2F-220ENST00000472479 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
UBE2F-220ENST00000472479 BCL9O00512 1426 aa13.57□□□□□ -0.24
UBE2F-220ENST00000472479 EIF4A1P60842 406 aaKnown RBP13.57□□□□□ -0.24
UBE2F-220ENST00000472479 TWISTNBQ3B726 338 aaPredicted RBP13.57□□□□□ -0.24
UBE2F-220ENST00000472479 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
UBE2F-220ENST00000472479 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
UBE2F-220ENST00000472479 CHMP4AQ9BY43 222 aa13.57□□□□□ -0.24
UBE2F-220ENST00000472479 BRWD3Q6RI45 1802 aa13.57□□□□□ -0.24
UBE2F-220ENST00000472479 SNRPA1P09661 255 aaKnown RBP13.56□□□□□ -0.24
UBE2F-220ENST00000472479 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
UBE2F-220ENST00000472479 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
UBE2F-220ENST00000472479 SCN11AQ9UI33 1791 aa13.56□□□□□ -0.24
UBE2F-220ENST00000472479 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
UBE2F-220ENST00000472479 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
UBE2F-220ENST00000472479 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
UBE2F-220ENST00000472479 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
UBE2F-220ENST00000472479 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
UBE2F-220ENST00000472479 SIK1P57059 783 aa13.55□□□□□ -0.24
UBE2F-220ENST00000472479 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
UBE2F-220ENST00000472479 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
UBE2F-220ENST00000472479 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
UBE2F-220ENST00000472479 STARD3NLO95772 234 aa13.54□□□□□ -0.24
UBE2F-220ENST00000472479 BAG6P46379 1132 aa13.54□□□□□ -0.24
UBE2F-220ENST00000472479 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
UBE2F-220ENST00000472479 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
UBE2F-220ENST00000472479 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
UBE2F-220ENST00000472479 HMGB2P26583 209 aaKnown RBP13.53□□□□□ -0.24
UBE2F-220ENST00000472479 HDGFL1Q5TGJ6 251 aa13.53□□□□□ -0.24
UBE2F-220ENST00000472479 TSPYL6Q8N831 410 aa13.53□□□□□ -0.24
UBE2F-220ENST00000472479 ARXQ96QS3 562 aa13.53□□□□□ -0.24
UBE2F-220ENST00000472479 STK31Q9BXU1 1019 aa13.53□□□□□ -0.24
UBE2F-220ENST00000472479 MRC1P22897 1456 aa13.52□□□□□ -0.24
UBE2F-220ENST00000472479 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.24
UBE2F-220ENST00000472479 CCDC30Q5VVM6 783 aa13.52□□□□□ -0.25
UBE2F-220ENST00000472479 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
UBE2F-220ENST00000472479 DNAJC10Q8IXB1 793 aa13.52□□□□□ -0.25
UBE2F-220ENST00000472479 VSIG10Q8N0Z9 540 aa13.52□□□□□ -0.25
UBE2F-220ENST00000472479 TOGARAM1Q9Y4F4 1720 aa13.51□□□□□ -0.25
UBE2F-220ENST00000472479 VAMP4O75379 141 aa13.51□□□□□ -0.25
UBE2F-220ENST00000472479 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
UBE2F-220ENST00000472479 KCNQ4P56696 695 aa13.51□□□□□ -0.25
UBE2F-220ENST00000472479 ZNF330Q9Y3S2 320 aaPredicted RBP13.51□□□□□ -0.25
UBE2F-220ENST00000472479 ADAMTS7Q9UKP4 1686 aa13.51□□□□□ -0.25
UBE2F-220ENST00000472479 PRAMEF22A3QJZ6 481 aa13.5□□□□□ -0.25
UBE2F-220ENST00000472479 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
UBE2F-220ENST00000472479 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
UBE2F-220ENST00000472479 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
UBE2F-220ENST00000472479 RCAN3Q9UKA8 241 aa13.5□□□□□ -0.25
UBE2F-220ENST00000472479 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
UBE2F-220ENST00000472479 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
UBE2F-220ENST00000472479 ITGB4P16144 1822 aa13.5□□□□□ -0.25
UBE2F-220ENST00000472479 PLSCR1O15162 318 aa13.49□□□□□ -0.25
UBE2F-220ENST00000472479 HOXB7P09629 217 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms