RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
CALD1-215ENST00000472096 HMOX1P09601 288 aa20.29■□□□□ 0.84
CALD1-215ENST00000472096 PALLDQ8WX93 1383 aa20.29■□□□□ 0.84
CALD1-215ENST00000472096 ADAMTS7Q9UKP4 1686 aa20.29■□□□□ 0.84
CALD1-215ENST00000472096 SLC15A2Q16348 729 aa20.28■□□□□ 0.84
CALD1-215ENST00000472096 CFAP53Q96M91 514 aa20.28■□□□□ 0.84
CALD1-215ENST00000472096 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
CALD1-215ENST00000472096 ZNF827Q17R98 1081 aa20.26■□□□□ 0.83
CALD1-215ENST00000472096 PIGBQ92521 554 aa20.26■□□□□ 0.83
CALD1-215ENST00000472096 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
CALD1-215ENST00000472096 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
CALD1-215ENST00000472096 CCNL1Q9UK58 526 aaPredicted RBP20.26■□□□□ 0.83
CALD1-215ENST00000472096 SSUH2Q9Y2M2 353 aa20.26■□□□□ 0.83
CALD1-215ENST00000472096 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
CALD1-215ENST00000472096 C4BP0C0L5 1744 aa20.25■□□□□ 0.83
CALD1-215ENST00000472096 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
CALD1-215ENST00000472096 KCNQ4P56696 695 aa20.25■□□□□ 0.83
CALD1-215ENST00000472096 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
CALD1-215ENST00000472096 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
CALD1-215ENST00000472096 MRC1P22897 1456 aa20.24■□□□□ 0.83
CALD1-215ENST00000472096 UBR3Q6ZT12 1888 aa20.23■□□□□ 0.83
CALD1-215ENST00000472096 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
CALD1-215ENST00000472096 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
CALD1-215ENST00000472096 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
CALD1-215ENST00000472096 FBXO3Q9UK99 471 aa20.23■□□□□ 0.83
CALD1-215ENST00000472096 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
CALD1-215ENST00000472096 ERVV-2B6SEH9 535 aa20.22■□□□□ 0.83
CALD1-215ENST00000472096 COL24A1Q17RW2 1714 aa20.22■□□□□ 0.83
CALD1-215ENST00000472096 AKAP4Q5JQC9 854 aa20.21■□□□□ 0.83
CALD1-215ENST00000472096 SIPA1L3O60292 1781 aaPredicted RBP20.21■□□□□ 0.83
CALD1-215ENST00000472096 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
CALD1-215ENST00000472096 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
CALD1-215ENST00000472096 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
CALD1-215ENST00000472096 NUDCQ9Y266 331 aa20.19■□□□□ 0.82
CALD1-215ENST00000472096 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
CALD1-215ENST00000472096 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
CALD1-215ENST00000472096 ATG3Q9NT62 314 aa20.18■□□□□ 0.82
CALD1-215ENST00000472096 TJP1Q07157 1748 aa20.17■□□□□ 0.82
CALD1-215ENST00000472096 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
CALD1-215ENST00000472096 CABP4P57796 275 aa20.17■□□□□ 0.82
CALD1-215ENST00000472096 RALBP1Q15311 655 aa20.17■□□□□ 0.82
CALD1-215ENST00000472096 PNPLA7Q6ZV29 1317 aa20.17■□□□□ 0.82
CALD1-215ENST00000472096 DLG5Q8TDM6 1919 aa20.17■□□□□ 0.82
CALD1-215ENST00000472096 LOC102724428A0A0B4J2F2 783 aa20.16■□□□□ 0.82
CALD1-215ENST00000472096 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
CALD1-215ENST00000472096 SIK1P57059 783 aa20.16■□□□□ 0.82
CALD1-215ENST00000472096 ZBTB7AO95365 584 aa20.15■□□□□ 0.82
CALD1-215ENST00000472096 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
CALD1-215ENST00000472096 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
CALD1-215ENST00000472096 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
CALD1-215ENST00000472096 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
CALD1-215ENST00000472096 RNMTO43148 476 aaKnown RBP20.14■□□□□ 0.81
CALD1-215ENST00000472096 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
CALD1-215ENST00000472096 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
CALD1-215ENST00000472096 MTFR1LQ9H019 292 aa20.13■□□□□ 0.81
CALD1-215ENST00000472096 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
CALD1-215ENST00000472096 MYH14Q7Z406 1995 aaKnown RBP20.13■□□□□ 0.81
CALD1-215ENST00000472096 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
CALD1-215ENST00000472096 SLC52A2Q9HAB3 445 aa20.12■□□□□ 0.81
CALD1-215ENST00000472096 MYBBP1AQ9BQG0 1328 aaKnown RBP20.11■□□□□ 0.81
CALD1-215ENST00000472096 FCHSD2O94868 740 aa20.11■□□□□ 0.81
CALD1-215ENST00000472096 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
CALD1-215ENST00000472096 ITPK1Q13572 414 aa20.11■□□□□ 0.81
CALD1-215ENST00000472096 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
CALD1-215ENST00000472096 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
CALD1-215ENST00000472096 KCPQ6ZWJ8 1503 aa20.11■□□□□ 0.81
CALD1-215ENST00000472096 PTGER2P43116 358 aa20.1■□□□□ 0.81
CALD1-215ENST00000472096 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
CALD1-215ENST00000472096 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
CALD1-215ENST00000472096 AK7Q96M32 723 aa20.09■□□□□ 0.81
CALD1-215ENST00000472096 RBM42Q9BTD8 480 aaKnown RBP20.09■□□□□ 0.81
CALD1-215ENST00000472096 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
CALD1-215ENST00000472096 SLC16A10Q8TF71 515 aa20.08■□□□□ 0.81
CALD1-215ENST00000472096 SGIP1Q9BQI5 828 aa20.08■□□□□ 0.81
CALD1-215ENST00000472096 PPP1R1BQ9UD71 204 aaPredicted RBP20.08■□□□□ 0.81
CALD1-215ENST00000472096 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
CALD1-215ENST00000472096 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
CALD1-215ENST00000472096 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
CALD1-215ENST00000472096 PTCD1O75127 700 aaKnown RBP20.05■□□□□ 0.8
CALD1-215ENST00000472096 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
CALD1-215ENST00000472096 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
CALD1-215ENST00000472096 FLAD1Q8NFF5 587 aa20.04■□□□□ 0.8
CALD1-215ENST00000472096 CNTNAP4Q9C0A0 1308 aa20.03■□□□□ 0.8
CALD1-215ENST00000472096 ZNF316A6NFI3 1004 aaPredicted RBP20.03■□□□□ 0.8
CALD1-215ENST00000472096 GNPATO15228 680 aa20.03■□□□□ 0.8
CALD1-215ENST00000472096 SSFA2P28290 1259 aa20.03■□□□□ 0.8
CALD1-215ENST00000472096 SLC39A6Q13433 755 aa20.03■□□□□ 0.8
CALD1-215ENST00000472096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.02■□□□□ 0.8
CALD1-215ENST00000472096 PHF14O94880 888 aa20.02■□□□□ 0.8
CALD1-215ENST00000472096 TEFQ10587 303 aa20.02■□□□□ 0.8
CALD1-215ENST00000472096 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
CALD1-215ENST00000472096 SMIM5Q71RC9 77 aa20.01■□□□□ 0.79
CALD1-215ENST00000472096 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
CALD1-215ENST00000472096 NEFMP07197 916 aa20■□□□□ 0.79
CALD1-215ENST00000472096 RC3H1Q5TC82 1133 aaKnown RBP20■□□□□ 0.79
CALD1-215ENST00000472096 POLD1P28340 1107 aa19.99■□□□□ 0.79
CALD1-215ENST00000472096 VASPP50552 380 aaPredicted RBP19.99■□□□□ 0.79
CALD1-215ENST00000472096 ARXQ96QS3 562 aa19.99■□□□□ 0.79
CALD1-215ENST00000472096 MAPK8IP3Q9UPT6 1336 aa19.99■□□□□ 0.79
CALD1-215ENST00000472096 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms