RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
CD46-213ENST00000471987 GTPBP3Q969Y2 492 aaKnown RBP10.61□□□□□ -0.71
CD46-213ENST00000471987 TRERF1Q96PN7 1200 aa10.61□□□□□ -0.71
CD46-213ENST00000471987 GPR25O00155 361 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 STAU1O95793 577 aaKnown RBP10.6□□□□□ -0.71
CD46-213ENST00000471987 INHAP05111 366 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 PHKA2P46019 1235 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 GDF10P55107 478 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
CD46-213ENST00000471987 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
CD46-213ENST00000471987 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
CD46-213ENST00000471987 SCNN1DP51172 638 aa10.59□□□□□ -0.71
CD46-213ENST00000471987 C4orf17Q53FE4 359 aa10.59□□□□□ -0.71
CD46-213ENST00000471987 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
CD46-213ENST00000471987 NFATC2IPQ8NCF5 419 aa10.59□□□□□ -0.71
CD46-213ENST00000471987 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
CD46-213ENST00000471987 LZTS3O60299 673 aaPredicted RBP10.58□□□□□ -0.72
CD46-213ENST00000471987 SKIP12755 728 aa10.58□□□□□ -0.72
CD46-213ENST00000471987 EML3Q32P44 896 aa10.58□□□□□ -0.72
CD46-213ENST00000471987 GPAMQ9HCL2 828 aa10.58□□□□□ -0.72
CD46-213ENST00000471987 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
CD46-213ENST00000471987 ADAMTS8Q9UP79 889 aa10.57□□□□□ -0.72
CD46-213ENST00000471987 CSB-PGBD3P0DP91 1061 aa10.55□□□□□ -0.72
CD46-213ENST00000471987 PGBD3Q8N328 593 aa10.55□□□□□ -0.72
CD46-213ENST00000471987 NOD1Q9Y239 953 aa10.55□□□□□ -0.72
CD46-213ENST00000471987 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
CD46-213ENST00000471987 SMTNP53814 917 aa10.54□□□□□ -0.72
CD46-213ENST00000471987 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
CD46-213ENST00000471987 LBRQ14739 615 aaKnown RBP10.54□□□□□ -0.72
CD46-213ENST00000471987 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
CD46-213ENST00000471987 PCDHGA11Q9Y5H2 935 aa10.54□□□□□ -0.72
CD46-213ENST00000471987 IGF1RP08069 1367 aa10.53□□□□□ -0.72
CD46-213ENST00000471987 MX2P20592 715 aa10.53□□□□□ -0.72
CD46-213ENST00000471987 MSX1P28360 303 aa10.53□□□□□ -0.72
CD46-213ENST00000471987 LYPD4Q6UWN0 246 aa10.53□□□□□ -0.72
CD46-213ENST00000471987 POM121CA8CG34 1229 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 TMEM229AB2RXF0 380 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 RNF225M0QZC1 329 aaPredicted RBP10.52□□□□□ -0.73
CD46-213ENST00000471987 PLA2G4AP47712 749 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 NCOA4Q13772 614 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 EFHC2Q5JST6 749 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 NIFKQ9BYG3 293 aaKnown RBP10.52□□□□□ -0.73
CD46-213ENST00000471987 RUBCNLQ9H714 662 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 SERTAD1Q9UHV2 236 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 PHF24Q9UPV7 400 aa10.52□□□□□ -0.73
CD46-213ENST00000471987 USP17L5A8MUK1 530 aa10.51□□□□□ -0.73
CD46-213ENST00000471987 THBS1P07996 1170 aa10.51□□□□□ -0.73
CD46-213ENST00000471987 CELA2BP08218 269 aaPredicted RBP10.51□□□□□ -0.73
CD46-213ENST00000471987 GTF2IP78347 998 aa10.51□□□□□ -0.73
CD46-213ENST00000471987 ENAMQ9NRM1 1142 aa10.51□□□□□ -0.73
CD46-213ENST00000471987 A6NJY4 79 aa10.5□□□□□ -0.73
CD46-213ENST00000471987 BACH1O14867 736 aa10.5□□□□□ -0.73
CD46-213ENST00000471987 MTFR1Q15390 333 aa10.5□□□□□ -0.73
CD46-213ENST00000471987 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
CD46-213ENST00000471987 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
CD46-213ENST00000471987 CDK2AP1O14519 115 aa10.49□□□□□ -0.73
CD46-213ENST00000471987 MARSP56192 900 aaKnown RBP10.49□□□□□ -0.73
CD46-213ENST00000471987 PSME1Q06323 249 aa10.49□□□□□ -0.73
CD46-213ENST00000471987 HDGFL1Q5TGJ6 251 aa10.49□□□□□ -0.73
CD46-213ENST00000471987 CRISPLD1Q9H336 500 aa10.49□□□□□ -0.73
CD46-213ENST00000471987 DEPDC4Q8N2C3 294 aa10.48□□□□□ -0.73
CD46-213ENST00000471987 MAP2K3P46734 347 aa10.47□□□□□ -0.73
CD46-213ENST00000471987 UBAP2LQ14157 1087 aaKnown RBP10.47□□□□□ -0.73
CD46-213ENST00000471987 SUZ12Q15022 739 aaKnown RBP10.47□□□□□ -0.73
CD46-213ENST00000471987 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
CD46-213ENST00000471987 AIDAQ96BJ3 306 aa10.47□□□□□ -0.73
CD46-213ENST00000471987 IQSEC3Q9UPP2 1182 aaPredicted RBP10.47□□□□□ -0.73
CD46-213ENST00000471987 BCRP11274 1271 aa10.46□□□□□ -0.73
CD46-213ENST00000471987 NBPF1Q3BBV0 1214 aa10.46□□□□□ -0.73
CD46-213ENST00000471987 PLEKHM2Q8IWE5 1019 aa10.46□□□□□ -0.73
CD46-213ENST00000471987 ATXN7L1Q9ULK2 861 aaPredicted RBP10.46□□□□□ -0.73
CD46-213ENST00000471987 ATP4AP20648 1035 aa10.45□□□□□ -0.74
CD46-213ENST00000471987 FIGNL1Q6PIW4 674 aa10.45□□□□□ -0.74
CD46-213ENST00000471987 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
CD46-213ENST00000471987 ZNF295-AS1Q8N0V1 137 aa10.45□□□□□ -0.74
CD46-213ENST00000471987 CLUAP1Q96AJ1 413 aa10.45□□□□□ -0.74
CD46-213ENST00000471987 ACDQ96AP0 544 aa10.45□□□□□ -0.74
CD46-213ENST00000471987 SCARF2Q96GP6 870 aaPredicted RBP10.45□□□□□ -0.74
CD46-213ENST00000471987 LRRC4BQ9NT99 713 aa10.45□□□□□ -0.74
CD46-213ENST00000471987 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 ATP9BO43861 1147 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 GSK3AP49840 483 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 ATP1A2P50993 1020 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 NLRP8Q86W28 1048 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
CD46-213ENST00000471987 UCN2Q96RP3 112 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 ZNF358Q9NW07 568 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 CABP1Q9NZU7 370 aa10.44□□□□□ -0.74
CD46-213ENST00000471987 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
CD46-213ENST00000471987 RASSF7Q02833 373 aa10.43□□□□□ -0.74
CD46-213ENST00000471987 FNBP4Q8N3X1 1017 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms