RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 CDCA7LQ96GN5 454 aa24.65■■□□□ 1.54
SNX4-203ENST00000471751 SOS1Q07889 1333 aaPredicted RBP24.65■■□□□ 1.54
SNX4-203ENST00000471751 SENP3-EIF4A1A0A087X0R7 540 aa24.64■■□□□ 1.54
SNX4-203ENST00000471751 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
SNX4-203ENST00000471751 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
SNX4-203ENST00000471751 SIPA1L3O60292 1781 aaPredicted RBP24.63■■□□□ 1.53
SNX4-203ENST00000471751 CABP4P57796 275 aa24.62■■□□□ 1.53
SNX4-203ENST00000471751 CHMP4AQ9BY43 222 aa24.62■■□□□ 1.53
SNX4-203ENST00000471751 SPINK5Q9NQ38 1064 aaPredicted RBP24.62■■□□□ 1.53
SNX4-203ENST00000471751 ZNF428Q96B54 188 aa24.61■■□□□ 1.53
SNX4-203ENST00000471751 KRT27Q7Z3Y8 459 aa24.61■■□□□ 1.53
SNX4-203ENST00000471751 BTBD11A6QL63 1104 aa24.6■■□□□ 1.53
SNX4-203ENST00000471751 MBIPQ9NS73 344 aa24.6■■□□□ 1.53
SNX4-203ENST00000471751 TSPYL4Q9UJ04 414 aa24.6■■□□□ 1.53
SNX4-203ENST00000471751 FANCIQ9NVI1 1328 aa24.59■■□□□ 1.53
SNX4-203ENST00000471751 NFATC2IPQ8NCF5 419 aa24.59■■□□□ 1.53
SNX4-203ENST00000471751 FAM182BQ5T319 152 aa24.58■■□□□ 1.52
SNX4-203ENST00000471751 LAS1LQ9Y4W2 734 aaKnown RBP24.57■■□□□ 1.52
SNX4-203ENST00000471751 TMOD3Q9NYL9 352 aa24.56■■□□□ 1.52
SNX4-203ENST00000471751 KAT6BQ8WYB5 2073 aa24.56■■□□□ 1.52
SNX4-203ENST00000471751 HOXB7P09629 217 aa24.55■■□□□ 1.52
SNX4-203ENST00000471751 FAM196AQ6ZSG2 479 aa24.55■■□□□ 1.52
SNX4-203ENST00000471751 KDM3BQ7LBC6 1761 aa24.54■■□□□ 1.52
SNX4-203ENST00000471751 ITGB4P16144 1822 aa24.54■■□□□ 1.52
SNX4-203ENST00000471751 ZNF790Q6PG37 636 aa24.54■■□□□ 1.52
SNX4-203ENST00000471751 TSR2Q969E8 191 aaKnown RBP24.52■■□□□ 1.52
SNX4-203ENST00000471751 TOGARAM1Q9Y4F4 1720 aa24.52■■□□□ 1.52
SNX4-203ENST00000471751 HEG1Q9ULI3 1381 aa24.51■■□□□ 1.51
SNX4-203ENST00000471751 EIF4A1P60842 406 aaKnown RBP24.51■■□□□ 1.51
SNX4-203ENST00000471751 DEFB132Q7Z7B7 95 aa24.51■■□□□ 1.51
SNX4-203ENST00000471751 CCDC125Q86Z20 511 aa24.51■■□□□ 1.51
SNX4-203ENST00000471751 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
SNX4-203ENST00000471751 EXOSC9Q06265 439 aaKnown RBP24.5■■□□□ 1.51
SNX4-203ENST00000471751 SF3B2Q13435 895 aaKnown RBP24.5■■□□□ 1.51
SNX4-203ENST00000471751 PIGBQ92521 554 aa24.5■■□□□ 1.51
SNX4-203ENST00000471751 BRWD3Q6RI45 1802 aa24.5■■□□□ 1.51
SNX4-203ENST00000471751 PRIM1P49642 420 aaKnown RBP24.49■■□□□ 1.51
SNX4-203ENST00000471751 DOT1LQ8TEK3 1739 aa24.48■■□□□ 1.51
SNX4-203ENST00000471751 VSIG10Q8N0Z9 540 aa24.48■■□□□ 1.51
SNX4-203ENST00000471751 SMARCC1Q92922 1105 aaPredicted RBP24.48■■□□□ 1.51
SNX4-203ENST00000471751 MIS18AQ9NYP9 233 aa24.48■■□□□ 1.51
SNX4-203ENST00000471751 VAMP4O75379 141 aa24.47■■□□□ 1.51
SNX4-203ENST00000471751 HMGB2P26583 209 aaKnown RBP24.47■■□□□ 1.51
SNX4-203ENST00000471751 TWISTNBQ3B726 338 aaPredicted RBP24.47■■□□□ 1.51
SNX4-203ENST00000471751 ALDH1L2Q3SY69 923 aa24.47■■□□□ 1.51
SNX4-203ENST00000471751 FMNL2Q96PY5 1086 aa24.47■■□□□ 1.51
SNX4-203ENST00000471751 PAPPAQ13219 1627 aa24.46■■□□□ 1.51
SNX4-203ENST00000471751 SBF2Q86WG5 1849 aa24.46■■□□□ 1.51
SNX4-203ENST00000471751 CACNA1FO60840 1977 aa24.46■■□□□ 1.51
SNX4-203ENST00000471751 BRPF1P55201 1214 aaPredicted RBP24.45■■□□□ 1.5
SNX4-203ENST00000471751 TEX13AQ9BXU3 409 aaPredicted RBP24.45■■□□□ 1.5
SNX4-203ENST00000471751 RCAN3Q9UKA8 241 aa24.45■■□□□ 1.5
SNX4-203ENST00000471751 UBR2Q8IWV8 1755 aa24.45■■□□□ 1.5
SNX4-203ENST00000471751 NHSQ6T4R5 1651 aa24.44■■□□□ 1.5
SNX4-203ENST00000471751 C8orf58Q8NAV2 365 aa24.44■■□□□ 1.5
SNX4-203ENST00000471751 BCL11BQ9C0K0 894 aaPredicted RBP24.44■■□□□ 1.5
SNX4-203ENST00000471751 GIGYF1O75420 1035 aaPredicted RBP24.43■■□□□ 1.5
SNX4-203ENST00000471751 SNRPA1P09661 255 aaKnown RBP24.43■■□□□ 1.5
SNX4-203ENST00000471751 ATG3Q9NT62 314 aa24.43■■□□□ 1.5
SNX4-203ENST00000471751 SYTL4Q96C24 671 aaPredicted RBP24.42■■□□□ 1.5
SNX4-203ENST00000471751 RARSP54136 660 aaKnown RBP24.4■■□□□ 1.5
SNX4-203ENST00000471751 SLC39A6Q13433 755 aa24.4■■□□□ 1.5
SNX4-203ENST00000471751 ACSBG1Q96GR2 724 aa24.4■■□□□ 1.5
SNX4-203ENST00000471751 ZNF496Q96IT1 587 aaPredicted RBP24.4■■□□□ 1.5
SNX4-203ENST00000471751 ZNF831Q5JPB2 1677 aa24.4■■□□□ 1.5
SNX4-203ENST00000471751 KCNQ3O43525 872 aa24.39■■□□□ 1.5
SNX4-203ENST00000471751 CCDC30Q5VVM6 783 aa24.39■■□□□ 1.5
SNX4-203ENST00000471751 TSPYL6Q8N831 410 aa24.39■■□□□ 1.5
SNX4-203ENST00000471751 ASAP1Q9ULH1 1129 aa24.38■■□□□ 1.49
SNX4-203ENST00000471751 KCPQ6ZWJ8 1503 aa24.38■■□□□ 1.49
SNX4-203ENST00000471751 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
SNX4-203ENST00000471751 EP400Q96L91 3159 aa24.37■■□□□ 1.49
SNX4-203ENST00000471751 KCNQ2O43526 872 aa24.36■■□□□ 1.49
SNX4-203ENST00000471751 TRIM37O94972 964 aa24.36■■□□□ 1.49
SNX4-203ENST00000471751 BAG6P46379 1132 aa24.36■■□□□ 1.49
SNX4-203ENST00000471751 EN1Q05925 392 aaPredicted RBP24.36■■□□□ 1.49
SNX4-203ENST00000471751 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.36■■□□□ 1.49
SNX4-203ENST00000471751 RNF123Q5XPI4 1314 aa24.36■■□□□ 1.49
SNX4-203ENST00000471751 CICQ96RK0 1608 aaPredicted RBP24.35■■□□□ 1.49
SNX4-203ENST00000471751 ELL2O00472 640 aaPredicted RBP24.35■■□□□ 1.49
SNX4-203ENST00000471751 BTAF1O14981 1849 aa24.34■■□□□ 1.49
SNX4-203ENST00000471751 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
SNX4-203ENST00000471751 PALLDQ8WX93 1383 aa24.33■■□□□ 1.49
SNX4-203ENST00000471751 KRT24Q2M2I5 525 aa24.33■■□□□ 1.48
SNX4-203ENST00000471751 HDGFL1Q5TGJ6 251 aa24.33■■□□□ 1.48
SNX4-203ENST00000471751 ARHGAP45Q92619 1136 aa24.33■■□□□ 1.48
SNX4-203ENST00000471751 DBF4Q9UBU7 674 aaPredicted RBP24.33■■□□□ 1.48
SNX4-203ENST00000471751 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
SNX4-203ENST00000471751 PLSCR1O15162 318 aa24.32■■□□□ 1.48
SNX4-203ENST00000471751 IPO8O15397 1037 aaKnown RBP24.32■■□□□ 1.48
SNX4-203ENST00000471751 STARD3NLO95772 234 aa24.32■■□□□ 1.48
SNX4-203ENST00000471751 SSH1Q8WYL5 1049 aa24.32■■□□□ 1.48
SNX4-203ENST00000471751 LOC102724428A0A0B4J2F2 783 aa24.31■■□□□ 1.48
SNX4-203ENST00000471751 PTCD1O75127 700 aaKnown RBP24.31■■□□□ 1.48
SNX4-203ENST00000471751 SIK1P57059 783 aa24.31■■□□□ 1.48
SNX4-203ENST00000471751 LAMB4A4D0S4 1761 aa24.3■■□□□ 1.48
SNX4-203ENST00000471751 MS4A1P11836 297 aa24.3■■□□□ 1.48
SNX4-203ENST00000471751 SMC4Q9NTJ3 1288 aa24.3■■□□□ 1.48
SNX4-203ENST00000471751 APBA3O96018 575 aa24.29■■□□□ 1.48
SNX4-203ENST00000471751 MRPL50Q8N5N7 158 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms