RNA–Protein interactions for RNA: ENST00000471437.1

BRD8-217, Transcript of bromodomain containing 8, humanhuman

TSL 2

Gene BRD8, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-217ENST00000471437 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
BRD8-217ENST00000471437 SLC52A2Q9HAB3 445 aa13.11□□□□□ -0.31
BRD8-217ENST00000471437 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
BRD8-217ENST00000471437 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
BRD8-217ENST00000471437 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
BRD8-217ENST00000471437 ZNF428Q96B54 188 aa13.1□□□□□ -0.31
BRD8-217ENST00000471437 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
BRD8-217ENST00000471437 SOS1Q07889 1333 aaPredicted RBP13.1□□□□□ -0.31
BRD8-217ENST00000471437 EP400Q96L91 3159 aa13.1□□□□□ -0.31
BRD8-217ENST00000471437 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
BRD8-217ENST00000471437 KDM6AO15550 1401 aaPredicted RBP13.09□□□□□ -0.31
BRD8-217ENST00000471437 WNK3Q9BYP7 1800 aa13.09□□□□□ -0.31
BRD8-217ENST00000471437 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
BRD8-217ENST00000471437 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
BRD8-217ENST00000471437 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
BRD8-217ENST00000471437 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
BRD8-217ENST00000471437 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
BRD8-217ENST00000471437 GLI3P10071 1580 aa13.07□□□□□ -0.32
BRD8-217ENST00000471437 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
BRD8-217ENST00000471437 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
BRD8-217ENST00000471437 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
BRD8-217ENST00000471437 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
BRD8-217ENST00000471437 MRC1P22897 1456 aa13.06□□□□□ -0.32
BRD8-217ENST00000471437 HOXB7P09629 217 aa13.06□□□□□ -0.32
BRD8-217ENST00000471437 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
BRD8-217ENST00000471437 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
BRD8-217ENST00000471437 BCL9O00512 1426 aa13.05□□□□□ -0.32
BRD8-217ENST00000471437 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
BRD8-217ENST00000471437 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
BRD8-217ENST00000471437 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
BRD8-217ENST00000471437 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
BRD8-217ENST00000471437 TWISTNBQ3B726 338 aaPredicted RBP13.04□□□□□ -0.32
BRD8-217ENST00000471437 SHANK3Q9BYB0 1731 aa13.04□□□□□ -0.32
BRD8-217ENST00000471437 VAMP4O75379 141 aa13.03□□□□□ -0.32
BRD8-217ENST00000471437 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
BRD8-217ENST00000471437 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
BRD8-217ENST00000471437 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
BRD8-217ENST00000471437 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
BRD8-217ENST00000471437 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.02□□□□□ -0.33
BRD8-217ENST00000471437 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
BRD8-217ENST00000471437 PIGBQ92521 554 aa13.02□□□□□ -0.33
BRD8-217ENST00000471437 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
BRD8-217ENST00000471437 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
BRD8-217ENST00000471437 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
BRD8-217ENST00000471437 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
BRD8-217ENST00000471437 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
BRD8-217ENST00000471437 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
BRD8-217ENST00000471437 ELL2O00472 640 aaPredicted RBP13□□□□□ -0.33
BRD8-217ENST00000471437 SNRPA1P09661 255 aaKnown RBP13□□□□□ -0.33
BRD8-217ENST00000471437 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
BRD8-217ENST00000471437 TSPYL6Q8N831 410 aa13□□□□□ -0.33
BRD8-217ENST00000471437 KCNQ3O43525 872 aa12.99□□□□□ -0.33
BRD8-217ENST00000471437 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
BRD8-217ENST00000471437 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
BRD8-217ENST00000471437 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
BRD8-217ENST00000471437 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
BRD8-217ENST00000471437 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
BRD8-217ENST00000471437 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
BRD8-217ENST00000471437 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
BRD8-217ENST00000471437 IPO8O15397 1037 aaKnown RBP12.98□□□□□ -0.33
BRD8-217ENST00000471437 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
BRD8-217ENST00000471437 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
BRD8-217ENST00000471437 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
BRD8-217ENST00000471437 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
BRD8-217ENST00000471437 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
BRD8-217ENST00000471437 SMC4Q9NTJ3 1288 aa12.98□□□□□ -0.33
BRD8-217ENST00000471437 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
BRD8-217ENST00000471437 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 NEFLP07196 543 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 MS4A1P11836 297 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
BRD8-217ENST00000471437 HDGFL1Q5TGJ6 251 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
BRD8-217ENST00000471437 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 KAT6BQ8WYB5 2073 aa12.97□□□□□ -0.33
BRD8-217ENST00000471437 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
BRD8-217ENST00000471437 BAG6P46379 1132 aa12.96□□□□□ -0.33
BRD8-217ENST00000471437 KRT24Q2M2I5 525 aa12.96□□□□□ -0.33
BRD8-217ENST00000471437 ERBB4Q15303 1308 aa12.95□□□□□ -0.34
BRD8-217ENST00000471437 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
BRD8-217ENST00000471437 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
BRD8-217ENST00000471437 DBF4Q9UBU7 674 aaPredicted RBP12.95□□□□□ -0.34
BRD8-217ENST00000471437 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
BRD8-217ENST00000471437 KCNQ2O43526 872 aa12.94□□□□□ -0.34
BRD8-217ENST00000471437 BCAR3O75815 825 aa12.94□□□□□ -0.34
BRD8-217ENST00000471437 STARD3NLO95772 234 aa12.94□□□□□ -0.34
BRD8-217ENST00000471437 CANXP27824 592 aaKnown RBP12.94□□□□□ -0.34
BRD8-217ENST00000471437 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
BRD8-217ENST00000471437 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
BRD8-217ENST00000471437 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
BRD8-217ENST00000471437 ITGB4P16144 1822 aa12.94□□□□□ -0.34
BRD8-217ENST00000471437 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
BRD8-217ENST00000471437 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
BRD8-217ENST00000471437 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
BRD8-217ENST00000471437 PDE3AQ14432 1141 aa12.93□□□□□ -0.34
BRD8-217ENST00000471437 FAM182BQ5T319 152 aa12.93□□□□□ -0.34
BRD8-217ENST00000471437 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms