RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 LINC00116Q8NCU8 138 aa12.96□□□□□ -0.33
POLR1A-206ENST00000471427 AK7Q96M32 723 aa12.96□□□□□ -0.33
POLR1A-206ENST00000471427 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.34
POLR1A-206ENST00000471427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
POLR1A-206ENST00000471427 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
POLR1A-206ENST00000471427 MSH5O43196 834 aa12.94□□□□□ -0.34
POLR1A-206ENST00000471427 HMOX1P09601 288 aa12.94□□□□□ -0.34
POLR1A-206ENST00000471427 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
POLR1A-206ENST00000471427 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
POLR1A-206ENST00000471427 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
POLR1A-206ENST00000471427 C5P01031 1676 aa12.93□□□□□ -0.34
POLR1A-206ENST00000471427 RNMTO43148 476 aaKnown RBP12.92□□□□□ -0.34
POLR1A-206ENST00000471427 C4BP0C0L5 1744 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 ADRA2BP18089 450 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
POLR1A-206ENST00000471427 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 LGR6Q9HBX8 967 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 CD2APQ9Y5K6 639 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
POLR1A-206ENST00000471427 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
POLR1A-206ENST00000471427 GNPATO15228 680 aa12.91□□□□□ -0.34
POLR1A-206ENST00000471427 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
POLR1A-206ENST00000471427 YY1P25490 414 aa12.91□□□□□ -0.34
POLR1A-206ENST00000471427 TRAPPC3LQ5T215 181 aa12.91□□□□□ -0.34
POLR1A-206ENST00000471427 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
POLR1A-206ENST00000471427 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
POLR1A-206ENST00000471427 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
POLR1A-206ENST00000471427 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
POLR1A-206ENST00000471427 PPP2R1AP30153 589 aa12.9□□□□□ -0.34
POLR1A-206ENST00000471427 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
POLR1A-206ENST00000471427 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
POLR1A-206ENST00000471427 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
POLR1A-206ENST00000471427 PHF14O94880 888 aa12.89□□□□□ -0.35
POLR1A-206ENST00000471427 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
POLR1A-206ENST00000471427 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
POLR1A-206ENST00000471427 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
POLR1A-206ENST00000471427 UBR3Q6ZT12 1888 aa12.89□□□□□ -0.35
POLR1A-206ENST00000471427 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
POLR1A-206ENST00000471427 FCHSD2O94868 740 aa12.88□□□□□ -0.35
POLR1A-206ENST00000471427 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
POLR1A-206ENST00000471427 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
POLR1A-206ENST00000471427 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
POLR1A-206ENST00000471427 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
POLR1A-206ENST00000471427 GPR162Q16538 588 aa12.87□□□□□ -0.35
POLR1A-206ENST00000471427 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
POLR1A-206ENST00000471427 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
POLR1A-206ENST00000471427 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
POLR1A-206ENST00000471427 GRIN3BO60391 1043 aa12.86□□□□□ -0.35
POLR1A-206ENST00000471427 RFC4P35249 363 aa12.86□□□□□ -0.35
POLR1A-206ENST00000471427 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
POLR1A-206ENST00000471427 INTS5Q6P9B9 1019 aaKnown RBP12.86□□□□□ -0.35
POLR1A-206ENST00000471427 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
POLR1A-206ENST00000471427 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
POLR1A-206ENST00000471427 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
POLR1A-206ENST00000471427 MRC1P22897 1456 aa12.85□□□□□ -0.35
POLR1A-206ENST00000471427 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-206ENST00000471427 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-206ENST00000471427 GYS1P13807 737 aa12.84□□□□□ -0.35
POLR1A-206ENST00000471427 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
POLR1A-206ENST00000471427 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
POLR1A-206ENST00000471427 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
POLR1A-206ENST00000471427 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.35
POLR1A-206ENST00000471427 ADAMTS7Q9UKP4 1686 aa12.83□□□□□ -0.35
POLR1A-206ENST00000471427 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.36
POLR1A-206ENST00000471427 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
POLR1A-206ENST00000471427 MMP10P09238 476 aa12.83□□□□□ -0.36
POLR1A-206ENST00000471427 TEFQ10587 303 aa12.83□□□□□ -0.36
POLR1A-206ENST00000471427 ZNF790Q6PG37 636 aa12.83□□□□□ -0.36
POLR1A-206ENST00000471427 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
POLR1A-206ENST00000471427 TEX13AQ9BXU3 409 aaPredicted RBP12.83□□□□□ -0.36
POLR1A-206ENST00000471427 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■□□□ 11.7
POLR1A-206ENST00000471427 TGFB2P61812 414 aa12.82□□□□□ -0.36
POLR1A-206ENST00000471427 CCDC87Q9NVE4 849 aa12.82□□□□□ -0.36
POLR1A-206ENST00000471427 STARD3NLO95772 234 aa12.81□□□□□ -0.36
POLR1A-206ENST00000471427 RALBP1Q15311 655 aa12.81□□□□□ -0.36
POLR1A-206ENST00000471427 TTC5Q8N0Z6 440 aa12.81□□□□□ -0.36
POLR1A-206ENST00000471427 COL5A3P25940 1745 aaPredicted RBP12.81□□□□□ -0.36
POLR1A-206ENST00000471427 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
POLR1A-206ENST00000471427 TM4SF1P30408 202 aa12.8□□□□□ -0.36
POLR1A-206ENST00000471427 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
POLR1A-206ENST00000471427 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
POLR1A-206ENST00000471427 USP42Q9H9J4 1324 aaKnown RBP12.8□□□□□ -0.36
POLR1A-206ENST00000471427 ZPR1O75312 459 aa12.79□□□□□ -0.36
POLR1A-206ENST00000471427 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
POLR1A-206ENST00000471427 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
POLR1A-206ENST00000471427 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
POLR1A-206ENST00000471427 NARFQ9UHQ1 456 aa12.79□□□□□ -0.36
POLR1A-206ENST00000471427 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
POLR1A-206ENST00000471427 CHD4Q14839 1912 aa12.79□□□□□ -0.36
POLR1A-206ENST00000471427 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
POLR1A-206ENST00000471427 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
POLR1A-206ENST00000471427 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
POLR1A-206ENST00000471427 FKBP8Q14318 412 aa12.78□□□□□ -0.36
POLR1A-206ENST00000471427 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
POLR1A-206ENST00000471427 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
POLR1A-206ENST00000471427 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
POLR1A-206ENST00000471427 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
POLR1A-206ENST00000471427 HEG1Q9ULI3 1381 aa12.78□□□□□ -0.36
POLR1A-206ENST00000471427 A0A087WZG4 1122 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms