RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
FN1-217ENST00000471193 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
FN1-217ENST00000471193 FANCIQ9NVI1 1328 aa15.15■□□□□ 0.02
FN1-217ENST00000471193 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
FN1-217ENST00000471193 MYH16Q9H6N6 1097 aa15.14■□□□□ 0.01
FN1-217ENST00000471193 ITGB4P16144 1822 aa15.14■□□□□ 0.01
FN1-217ENST00000471193 CHL1O00533 1208 aa15.13■□□□□ 0.01
FN1-217ENST00000471193 MBIPQ9NS73 344 aa15.13■□□□□ 0.01
FN1-217ENST00000471193 BABAM1Q9NWV8 329 aa15.13■□□□□ 0.01
FN1-217ENST00000471193 CABP4P57796 275 aa15.12■□□□□ 0.01
FN1-217ENST00000471193 TAF7Q15545 349 aaPredicted RBP15.12■□□□□ 0.01
FN1-217ENST00000471193 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
FN1-217ENST00000471193 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
FN1-217ENST00000471193 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
FN1-217ENST00000471193 UBR2Q8IWV8 1755 aa15.11■□□□□ 0.01
FN1-217ENST00000471193 TSPYL4Q9UJ04 414 aa15.11■□□□□ 0.01
FN1-217ENST00000471193 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
FN1-217ENST00000471193 NFATC2IPQ8NCF5 419 aa15.1■□□□□ 0.01
FN1-217ENST00000471193 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
FN1-217ENST00000471193 SBF2Q86WG5 1849 aa15.1■□□□□ 0.01
FN1-217ENST00000471193 KCPQ6ZWJ8 1503 aa15.09■□□□□ 0.01
FN1-217ENST00000471193 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
FN1-217ENST00000471193 FAM182BQ5T319 152 aa15.08■□□□□ 0
FN1-217ENST00000471193 ACSBG1Q96GR2 724 aa15.08■□□□□ 0
FN1-217ENST00000471193 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
FN1-217ENST00000471193 PIGBQ92521 554 aa15.07■□□□□ 0
FN1-217ENST00000471193 BTAF1O14981 1849 aa15.06■□□□□ 0
FN1-217ENST00000471193 KCNQ3O43525 872 aa15.06■□□□□ 0
FN1-217ENST00000471193 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
FN1-217ENST00000471193 EXOSC9Q06265 439 aaKnown RBP15.06■□□□□ 0
FN1-217ENST00000471193 ZNF790Q6PG37 636 aa15.06■□□□□ 0
FN1-217ENST00000471193 FAM196AQ6ZSG2 479 aa15.06■□□□□ 0
FN1-217ENST00000471193 SYTL4Q96C24 671 aaPredicted RBP15.06■□□□□ 0
FN1-217ENST00000471193 HEG1Q9ULI3 1381 aa15.06■□□□□ 0
FN1-217ENST00000471193 CICQ96RK0 1608 aaPredicted RBP15.06■□□□□ 0
FN1-217ENST00000471193 KCNQ2O43526 872 aa15.05■□□□□ -0
FN1-217ENST00000471193 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ -0
FN1-217ENST00000471193 SLC39A6Q13433 755 aa15.05■□□□□ -0
FN1-217ENST00000471193 C5P01031 1676 aa15.05■□□□□ -0
FN1-217ENST00000471193 LAMB4A4D0S4 1761 aa15.04■□□□□ -0
FN1-217ENST00000471193 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
FN1-217ENST00000471193 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
FN1-217ENST00000471193 KRT24Q2M2I5 525 aa15.03■□□□□ -0
FN1-217ENST00000471193 C8orf58Q8NAV2 365 aa15.03■□□□□ -0
FN1-217ENST00000471193 ATG3Q9NT62 314 aa15.03■□□□□ -0
FN1-217ENST00000471193 ASAP1Q9ULH1 1129 aa15.03■□□□□ -0
FN1-217ENST00000471193 TNS1Q9HBL0 1735 aaKnown RBP15.03■□□□□ -0
FN1-217ENST00000471193 SOS1Q07889 1333 aaPredicted RBP15.02■□□□□ -0
FN1-217ENST00000471193 TWISTNBQ3B726 338 aaPredicted RBP15.02■□□□□ -0
FN1-217ENST00000471193 PTF1AQ7RTS3 328 aa15.02■□□□□ -0
FN1-217ENST00000471193 TSPYL6Q8N831 410 aa15.02■□□□□ -0
FN1-217ENST00000471193 TJP1Q07157 1748 aa15.02□□□□□ -0.01
FN1-217ENST00000471193 ZNF831Q5JPB2 1677 aa15.02□□□□□ -0.01
FN1-217ENST00000471193 PALLDQ8WX93 1383 aa15.01□□□□□ -0.01
FN1-217ENST00000471193 HOXB7P09629 217 aa15.01□□□□□ -0.01
FN1-217ENST00000471193 ZNF496Q96IT1 587 aaPredicted RBP15.01□□□□□ -0.01
FN1-217ENST00000471193 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
FN1-217ENST00000471193 BCL11BQ9C0K0 894 aaPredicted RBP15.01□□□□□ -0.01
FN1-217ENST00000471193 LY75O60449 1722 aa15□□□□□ -0.01
FN1-217ENST00000471193 VAMP4O75379 141 aa14.99□□□□□ -0.01
FN1-217ENST00000471193 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
FN1-217ENST00000471193 SMARCC1Q92922 1105 aaPredicted RBP14.99□□□□□ -0.01
FN1-217ENST00000471193 ZNF428Q96B54 188 aa14.99□□□□□ -0.01
FN1-217ENST00000471193 EP400Q96L91 3159 aa14.99□□□□□ -0.01
FN1-217ENST00000471193 ELL2O00472 640 aaPredicted RBP14.98□□□□□ -0.01
FN1-217ENST00000471193 TRIM37O94972 964 aa14.98□□□□□ -0.01
FN1-217ENST00000471193 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
FN1-217ENST00000471193 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
FN1-217ENST00000471193 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
FN1-217ENST00000471193 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
FN1-217ENST00000471193 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
FN1-217ENST00000471193 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
FN1-217ENST00000471193 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
FN1-217ENST00000471193 COL5A3P25940 1745 aaPredicted RBP14.96□□□□□ -0.01
FN1-217ENST00000471193 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
FN1-217ENST00000471193 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
FN1-217ENST00000471193 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
FN1-217ENST00000471193 RREB1Q92766 1687 aa14.96□□□□□ -0.01
FN1-217ENST00000471193 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
FN1-217ENST00000471193 SIK1P57059 783 aa14.95□□□□□ -0.02
FN1-217ENST00000471193 ALDH1L2Q3SY69 923 aa14.95□□□□□ -0.02
FN1-217ENST00000471193 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
FN1-217ENST00000471193 KAT6BQ8WYB5 2073 aa14.95□□□□□ -0.02
FN1-217ENST00000471193 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
FN1-217ENST00000471193 CCDC30Q5VVM6 783 aa14.93□□□□□ -0.02
FN1-217ENST00000471193 DNAJC10Q8IXB1 793 aa14.93□□□□□ -0.02
FN1-217ENST00000471193 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
FN1-217ENST00000471193 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
FN1-217ENST00000471193 EIF2S2P20042 333 aaKnown RBP14.92□□□□□ -0.02
FN1-217ENST00000471193 BRPF1P55201 1214 aaPredicted RBP14.92□□□□□ -0.02
FN1-217ENST00000471193 BCL2L13Q9BXK5 485 aa14.92□□□□□ -0.02
FN1-217ENST00000471193 TEX13AQ9BXU3 409 aaPredicted RBP14.92□□□□□ -0.02
FN1-217ENST00000471193 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
FN1-217ENST00000471193 ERBB4Q15303 1308 aa14.92□□□□□ -0.02
FN1-217ENST00000471193 BCAR3O75815 825 aa14.91□□□□□ -0.02
FN1-217ENST00000471193 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
FN1-217ENST00000471193 ITPK1Q13572 414 aa14.91□□□□□ -0.02
FN1-217ENST00000471193 MRPL50Q8N5N7 158 aaKnown RBP14.91□□□□□ -0.02
FN1-217ENST00000471193 NECTIN2Q92692 538 aa14.91□□□□□ -0.02
FN1-217ENST00000471193 TAF1LQ8IZX4 1826 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms