RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 BCL9O00512 1426 aa37.67■■■■□ 3.62
SOD1-203ENST00000470944 ZNF853P0CG23 659 aa37.67■■■■□ 3.62
SOD1-203ENST00000470944 SYTL4Q96C24 671 aaPredicted RBP37.67■■■■□ 3.62
SOD1-203ENST00000470944 KCNQ2O43526 872 aa37.66■■■■□ 3.62
SOD1-203ENST00000470944 CFAP44Q96MT7 982 aa37.66■■■■□ 3.62
SOD1-203ENST00000470944 IFT57Q9NWB7 429 aa37.66■■■■□ 3.62
SOD1-203ENST00000470944 SIPA1L3O60292 1781 aaPredicted RBP37.65■■■■□ 3.62
SOD1-203ENST00000470944 SLFN5Q08AF3 891 aa37.64■■■■□ 3.62
SOD1-203ENST00000470944 PIGBQ92521 554 aa37.64■■■■□ 3.62
SOD1-203ENST00000470944 TSR2Q969E8 191 aaKnown RBP37.64■■■■□ 3.62
SOD1-203ENST00000470944 TMOD3Q9NYL9 352 aa37.64■■■■□ 3.62
SOD1-203ENST00000470944 CHL1O00533 1208 aa37.63■■■■□ 3.61
SOD1-203ENST00000470944 PTF1AQ7RTS3 328 aa37.63■■■■□ 3.61
SOD1-203ENST00000470944 GNAI1P63096 354 aa37.62■■■■□ 3.61
SOD1-203ENST00000470944 E9PSI1 815 aa37.61■■■■□ 3.61
SOD1-203ENST00000470944 FAM196AQ6ZSG2 479 aa37.61■■■■□ 3.61
SOD1-203ENST00000470944 MBIPQ9NS73 344 aa37.61■■■■□ 3.61
SOD1-203ENST00000470944 ITGB4P16144 1822 aa37.61■■■■□ 3.61
SOD1-203ENST00000470944 BTBD11A6QL63 1104 aa37.61■■■■□ 3.61
SOD1-203ENST00000470944 TSPYL4Q9UJ04 414 aa37.59■■■■□ 3.61
SOD1-203ENST00000470944 KCNQ3O43525 872 aa37.58■■■■□ 3.61
SOD1-203ENST00000470944 SLC39A6Q13433 755 aa37.58■■■■□ 3.61
SOD1-203ENST00000470944 TRMT2AQ8IZ69 625 aaKnown RBP37.58■■■■□ 3.61
SOD1-203ENST00000470944 FANCIQ9NVI1 1328 aa37.58■■■■□ 3.61
SOD1-203ENST00000470944 MYH16Q9H6N6 1097 aa37.56■■■■□ 3.6
SOD1-203ENST00000470944 KAT6BQ8WYB5 2073 aa37.56■■■■□ 3.6
SOD1-203ENST00000470944 DUSP27Q5VZP5 1158 aa37.56■■■■□ 3.6
SOD1-203ENST00000470944 BABAM1Q9NWV8 329 aa37.54■■■■□ 3.6
SOD1-203ENST00000470944 NHSQ6T4R5 1651 aa37.54■■■■□ 3.6
SOD1-203ENST00000470944 SBF2Q86WG5 1849 aa37.54■■■■□ 3.6
SOD1-203ENST00000470944 ASAP1Q9ULH1 1129 aa37.53■■■■□ 3.6
SOD1-203ENST00000470944 ZNF790Q6PG37 636 aa37.53■■■■□ 3.6
SOD1-203ENST00000470944 KDM3BQ7LBC6 1761 aa37.52■■■■□ 3.6
SOD1-203ENST00000470944 ATG3Q9NT62 314 aa37.51■■■■□ 3.6
SOD1-203ENST00000470944 TRIM37O94972 964 aa37.5■■■■□ 3.59
SOD1-203ENST00000470944 KRT24Q2M2I5 525 aa37.49■■■■□ 3.59
SOD1-203ENST00000470944 BCL11BQ9C0K0 894 aaPredicted RBP37.48■■■■□ 3.59
SOD1-203ENST00000470944 PAPPAQ13219 1627 aa37.48■■■■□ 3.59
SOD1-203ENST00000470944 EIF4A1P60842 406 aaKnown RBP37.46■■■■□ 3.59
SOD1-203ENST00000470944 EXOSC9Q06265 439 aaKnown RBP37.45■■■■□ 3.59
SOD1-203ENST00000470944 TTC5Q8N0Z6 440 aa37.45■■■■□ 3.59
SOD1-203ENST00000470944 ZNF496Q96IT1 587 aaPredicted RBP37.44■■■■□ 3.58
SOD1-203ENST00000470944 C8orf58Q8NAV2 365 aa37.44■■■■□ 3.58
SOD1-203ENST00000470944 BTAF1O14981 1849 aa37.43■■■■□ 3.58
SOD1-203ENST00000470944 KCPQ6ZWJ8 1503 aa37.42■■■■□ 3.58
SOD1-203ENST00000470944 PTCD1O75127 700 aaKnown RBP37.42■■■■□ 3.58
SOD1-203ENST00000470944 TSPYL6Q8N831 410 aa37.41■■■■□ 3.58
SOD1-203ENST00000470944 ELL2O00472 640 aaPredicted RBP37.41■■■■□ 3.58
SOD1-203ENST00000470944 UBR2Q8IWV8 1755 aa37.39■■■■□ 3.58
SOD1-203ENST00000470944 PALLDQ8WX93 1383 aa37.38■■■■□ 3.57
SOD1-203ENST00000470944 HEG1Q9ULI3 1381 aa37.38■■■■□ 3.57
SOD1-203ENST00000470944 PRAMEF22A3QJZ6 481 aa37.36■■■■□ 3.57
SOD1-203ENST00000470944 FMNL2Q96PY5 1086 aa37.36■■■■□ 3.57
SOD1-203ENST00000470944 SLC4A9Q96Q91 983 aa37.36■■■■□ 3.57
SOD1-203ENST00000470944 RBM42Q9BTD8 480 aaKnown RBP37.36■■■■□ 3.57
SOD1-203ENST00000470944 SMARCC1Q92922 1105 aaPredicted RBP37.34■■■■□ 3.57
SOD1-203ENST00000470944 GIGYF1O75420 1035 aaPredicted RBP37.33■■■■□ 3.57
SOD1-203ENST00000470944 TWISTNBQ3B726 338 aaPredicted RBP37.33■■■■□ 3.57
SOD1-203ENST00000470944 VAMP4O75379 141 aa37.3■■■■□ 3.56
SOD1-203ENST00000470944 TNS1Q9HBL0 1735 aaKnown RBP37.29■■■■□ 3.56
SOD1-203ENST00000470944 LOC102724428A0A0B4J2F2 783 aa37.29■■■■□ 3.56
SOD1-203ENST00000470944 SIK1P57059 783 aa37.29■■■■□ 3.56
SOD1-203ENST00000470944 APBA3O96018 575 aa37.28■■■■□ 3.56
SOD1-203ENST00000470944 SNRPA1P09661 255 aaKnown RBP37.28■■■■□ 3.56
SOD1-203ENST00000470944 C5P01031 1676 aa37.26■■■■□ 3.56
SOD1-203ENST00000470944 KCNQ4P56696 695 aa37.26■■■■□ 3.56
SOD1-203ENST00000470944 ILDR2Q71H61 639 aa37.25■■■■□ 3.55
SOD1-203ENST00000470944 VSIG10Q8N0Z9 540 aa37.24■■■■□ 3.55
SOD1-203ENST00000470944 USP16Q9Y5T5 823 aa37.24■■■■□ 3.55
SOD1-203ENST00000470944 DNAJC10Q8IXB1 793 aa37.24■■■■□ 3.55
SOD1-203ENST00000470944 NECTIN2Q92692 538 aa37.24■■■■□ 3.55
SOD1-203ENST00000470944 ATP6V1AP38606 617 aa37.23■■■■□ 3.55
SOD1-203ENST00000470944 HOXB7P09629 217 aa37.22■■■■□ 3.55
SOD1-203ENST00000470944 ITPK1Q13572 414 aa37.22■■■■□ 3.55
SOD1-203ENST00000470944 EIF2S2P20042 333 aaKnown RBP37.22■■■■□ 3.55
SOD1-203ENST00000470944 LY75O60449 1722 aa37.21■■■■□ 3.55
SOD1-203ENST00000470944 TCERG1O14776 1098 aaKnown RBP37.21■■■■□ 3.55
SOD1-203ENST00000470944 PLSCR1O15162 318 aa37.19■■■■□ 3.54
SOD1-203ENST00000470944 CT47B1P0C2W7 299 aaPredicted RBP37.19■■■■□ 3.54
SOD1-203ENST00000470944 TJP1Q07157 1748 aa37.19■■■■□ 3.54
SOD1-203ENST00000470944 SOS1Q07889 1333 aaPredicted RBP37.19■■■■□ 3.54
SOD1-203ENST00000470944 HDGFL1Q5TGJ6 251 aa37.19■■■■□ 3.54
SOD1-203ENST00000470944 PROM2Q8N271 834 aa37.19■■■■□ 3.54
SOD1-203ENST00000470944 CCNL1Q9UK58 526 aaPredicted RBP37.19■■■■□ 3.54
SOD1-203ENST00000470944 LRRC4BQ9NT99 713 aa37.17■■■■□ 3.54
SOD1-203ENST00000470944 RARSP54136 660 aaKnown RBP37.15■■■■□ 3.54
SOD1-203ENST00000470944 BCL2L13Q9BXK5 485 aa37.15■■■■□ 3.54
SOD1-203ENST00000470944 TXNRD1Q16881 649 aa37.14■■■■□ 3.54
SOD1-203ENST00000470944 SSH1Q8WYL5 1049 aa37.14■■■■□ 3.54
SOD1-203ENST00000470944 TEX13AQ9BXU3 409 aaPredicted RBP37.14■■■■□ 3.54
SOD1-203ENST00000470944 RCAN3Q9UKA8 241 aa37.14■■■■□ 3.54
SOD1-203ENST00000470944 ZNF831Q5JPB2 1677 aa37.14■■■■□ 3.54
SOD1-203ENST00000470944 CYP19A1P11511 503 aaPredicted RBP37.13■■■■□ 3.54
SOD1-203ENST00000470944 LAMB4A4D0S4 1761 aa37.13■■■■□ 3.53
SOD1-203ENST00000470944 CICQ96RK0 1608 aaPredicted RBP37.13■■■■□ 3.53
SOD1-203ENST00000470944 CENPBP07199 599 aaPredicted RBP37.13■■■■□ 3.53
SOD1-203ENST00000470944 EN1Q05925 392 aaPredicted RBP37.13■■■■□ 3.53
SOD1-203ENST00000470944 SF3B2Q13435 895 aaKnown RBP37.13■■■■□ 3.53
SOD1-203ENST00000470944 LINC00116Q8NCU8 138 aa37.13■■■■□ 3.53
SOD1-203ENST00000470944 PIP4K2AP48426 406 aaPredicted RBP37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms