RNA–Protein interactions for RNA: ENST00000470524.2

COL5A2-202, Transcript of collagen type V alpha 2 chain, humanhuman

TSL 5

Gene COL5A2, Length 704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-202ENST00000470524 POTECB2RU33 542 aa13□□□□□ -0.33
COL5A2-202ENST00000470524 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
COL5A2-202ENST00000470524 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
COL5A2-202ENST00000470524 EVC2Q86UK5 1308 aa12.99□□□□□ -0.33
COL5A2-202ENST00000470524 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
COL5A2-202ENST00000470524 GNPATO15228 680 aa12.99□□□□□ -0.33
COL5A2-202ENST00000470524 HSPA8P11142 646 aaKnown RBP12.99□□□□□ -0.33
COL5A2-202ENST00000470524 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
COL5A2-202ENST00000470524 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
COL5A2-202ENST00000470524 ITGB4P16144 1822 aa12.99□□□□□ -0.33
COL5A2-202ENST00000470524 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
COL5A2-202ENST00000470524 PDE4DIPQ5VU43 2346 aa12.99□□□□□ -0.33
COL5A2-202ENST00000470524 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
COL5A2-202ENST00000470524 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
COL5A2-202ENST00000470524 C4AP0C0L4 1744 aa12.98□□□□□ -0.33
COL5A2-202ENST00000470524 VEGFBP49765 207 aa12.97□□□□□ -0.33
COL5A2-202ENST00000470524 TMF1P82094 1093 aa12.97□□□□□ -0.33
COL5A2-202ENST00000470524 RASSF7Q02833 373 aa12.97□□□□□ -0.33
COL5A2-202ENST00000470524 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
COL5A2-202ENST00000470524 LOC102724428A0A0B4J2F2 783 aa12.96□□□□□ -0.33
COL5A2-202ENST00000470524 SIK1P57059 783 aa12.96□□□□□ -0.33
COL5A2-202ENST00000470524 ITPK1Q13572 414 aa12.96□□□□□ -0.33
COL5A2-202ENST00000470524 CCDC88AQ3V6T2 1871 aa12.95□□□□□ -0.34
COL5A2-202ENST00000470524 PIGBQ92521 554 aa12.95□□□□□ -0.34
COL5A2-202ENST00000470524 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
COL5A2-202ENST00000470524 CHRNA5P30532 468 aa12.94□□□□□ -0.34
COL5A2-202ENST00000470524 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
COL5A2-202ENST00000470524 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
COL5A2-202ENST00000470524 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
COL5A2-202ENST00000470524 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 GYS1P13807 737 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 LMNB1P20700 586 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
COL5A2-202ENST00000470524 TNRC18O15417 2968 aaPredicted RBP12.92□□□□□ -0.34
COL5A2-202ENST00000470524 CYP27B1O15528 508 aa12.92□□□□□ -0.34
COL5A2-202ENST00000470524 HOXC9P31274 260 aa12.92□□□□□ -0.34
COL5A2-202ENST00000470524 USHBP1Q8N6Y0 703 aa12.92□□□□□ -0.34
COL5A2-202ENST00000470524 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
COL5A2-202ENST00000470524 PASKQ96RG2 1323 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
COL5A2-202ENST00000470524 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
COL5A2-202ENST00000470524 FBLN1P23142 703 aa12.9□□□□□ -0.34
COL5A2-202ENST00000470524 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
COL5A2-202ENST00000470524 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
COL5A2-202ENST00000470524 TATP17735 454 aaPredicted RBP12.89□□□□□ -0.35
COL5A2-202ENST00000470524 ASAP1Q9ULH1 1129 aa12.89□□□□□ -0.35
COL5A2-202ENST00000470524 TMEM88BA6NKF7 163 aa12.88□□□□□ -0.35
COL5A2-202ENST00000470524 AMPHP49418 695 aa12.88□□□□□ -0.35
COL5A2-202ENST00000470524 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
COL5A2-202ENST00000470524 RFC4P35249 363 aa12.87□□□□□ -0.35
COL5A2-202ENST00000470524 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
COL5A2-202ENST00000470524 DDR1Q08345 913 aa12.87□□□□□ -0.35
COL5A2-202ENST00000470524 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
COL5A2-202ENST00000470524 NFKBIEO00221 500 aa12.85□□□□□ -0.35
COL5A2-202ENST00000470524 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
COL5A2-202ENST00000470524 NKX1-1Q15270 411 aaPredicted RBP12.85□□□□□ -0.35
COL5A2-202ENST00000470524 DEFB115Q30KQ5 88 aa12.85□□□□□ -0.35
COL5A2-202ENST00000470524 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
COL5A2-202ENST00000470524 SLC4A9Q96Q91 983 aa12.84□□□□□ -0.35
COL5A2-202ENST00000470524 MCOLN1Q9GZU1 580 aa12.84□□□□□ -0.35
COL5A2-202ENST00000470524 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
COL5A2-202ENST00000470524 EDC4Q6P2E9 1401 aaKnown RBP12.84□□□□□ -0.35
COL5A2-202ENST00000470524 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
COL5A2-202ENST00000470524 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.35
COL5A2-202ENST00000470524 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
COL5A2-202ENST00000470524 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
COL5A2-202ENST00000470524 FKBP8Q14318 412 aa12.83□□□□□ -0.36
COL5A2-202ENST00000470524 RC3H1Q5TC82 1133 aaKnown RBP12.83□□□□□ -0.36
COL5A2-202ENST00000470524 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
COL5A2-202ENST00000470524 SLC12A5Q9H2X9 1139 aa12.83□□□□□ -0.36
COL5A2-202ENST00000470524 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
COL5A2-202ENST00000470524 DDNO94850 711 aaPredicted RBP12.82□□□□□ -0.36
COL5A2-202ENST00000470524 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
COL5A2-202ENST00000470524 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
COL5A2-202ENST00000470524 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
COL5A2-202ENST00000470524 KDRP35968 1356 aa12.81□□□□□ -0.36
COL5A2-202ENST00000470524 CASP8AP2Q9UKL3 1982 aa12.81□□□□□ -0.36
COL5A2-202ENST00000470524 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
COL5A2-202ENST00000470524 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
COL5A2-202ENST00000470524 PRPF38BQ5VTL8 546 aaKnown RBP12.81□□□□□ -0.36
COL5A2-202ENST00000470524 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
COL5A2-202ENST00000470524 COL5A3P25940 1745 aaPredicted RBP12.81□□□□□ -0.36
COL5A2-202ENST00000470524 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
COL5A2-202ENST00000470524 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
COL5A2-202ENST00000470524 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
COL5A2-202ENST00000470524 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
COL5A2-202ENST00000470524 TM4SF1P30408 202 aa12.79□□□□□ -0.36
COL5A2-202ENST00000470524 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
COL5A2-202ENST00000470524 COG3Q96JB2 828 aa12.79□□□□□ -0.36
COL5A2-202ENST00000470524 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
COL5A2-202ENST00000470524 ZNF831Q5JPB2 1677 aa12.78□□□□□ -0.36
COL5A2-202ENST00000470524 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms