RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 ATG3Q9NT62 314 aa9.13□□□□□ -0.95
PSMD4-210ENST00000470396 TMOD3Q9NYL9 352 aa9.13□□□□□ -0.95
PSMD4-210ENST00000470396 CEMIPQ8WUJ3 1361 aa9.12□□□□□ -0.95
PSMD4-210ENST00000470396 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
PSMD4-210ENST00000470396 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
PSMD4-210ENST00000470396 AKT1S1Q96B36 256 aa9.12□□□□□ -0.95
PSMD4-210ENST00000470396 YY1P25490 414 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 CABP4P57796 275 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 ITPK1Q13572 414 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 SLC15A2Q16348 729 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 AMIGO3Q86WK7 504 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 GAS2L2Q8NHY3 880 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 SLC52A2Q9HAB3 445 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 CCNL1Q9UK58 526 aaPredicted RBP9.11□□□□□ -0.95
PSMD4-210ENST00000470396 UBR2Q8IWV8 1755 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 COL5A3P25940 1745 aaPredicted RBP9.11□□□□□ -0.95
PSMD4-210ENST00000470396 QSER1Q2KHR3 1735 aa9.11□□□□□ -0.95
PSMD4-210ENST00000470396 KCPQ6ZWJ8 1503 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 ZNF831Q5JPB2 1677 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 MYH14Q7Z406 1995 aaKnown RBP9.1□□□□□ -0.95
PSMD4-210ENST00000470396 CICQ96RK0 1608 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-210ENST00000470396 LOC102724428A0A0B4J2F2 783 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 GNAT3A8MTJ3 354 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 SIK1P57059 783 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 DCTN1Q14203 1278 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 LINC00116Q8NCU8 138 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
PSMD4-210ENST00000470396 ADAMTS8Q9UP79 889 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 TJP1Q07157 1748 aa9.1□□□□□ -0.95
PSMD4-210ENST00000470396 UBR3Q6ZT12 1888 aa9.09□□□□□ -0.95
PSMD4-210ENST00000470396 SLC39A6Q13433 755 aa9.09□□□□□ -0.95
PSMD4-210ENST00000470396 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
PSMD4-210ENST00000470396 SMIM5Q71RC9 77 aa9.09□□□□□ -0.95
PSMD4-210ENST00000470396 MCM10Q7L590 875 aa9.09□□□□□ -0.95
PSMD4-210ENST00000470396 PNPLA7Q6ZV29 1317 aa9.08□□□□□ -0.96
PSMD4-210ENST00000470396 NFE2L2Q16236 605 aa9.08□□□□□ -0.96
PSMD4-210ENST00000470396 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
PSMD4-210ENST00000470396 STK32BQ9NY57 414 aa9.08□□□□□ -0.96
PSMD4-210ENST00000470396 KCNQ3O43525 872 aa9.07□□□□□ -0.96
PSMD4-210ENST00000470396 PTCD1O75127 700 aaKnown RBP9.07□□□□□ -0.96
PSMD4-210ENST00000470396 ATP6V1AP38606 617 aa9.07□□□□□ -0.96
PSMD4-210ENST00000470396 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
PSMD4-210ENST00000470396 COL24A1Q17RW2 1714 aa9.06□□□□□ -0.96
PSMD4-210ENST00000470396 ANP32CO43423 234 aa9.06□□□□□ -0.96
PSMD4-210ENST00000470396 TMPOP42166 694 aaKnown RBP9.06□□□□□ -0.96
PSMD4-210ENST00000470396 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
PSMD4-210ENST00000470396 RBM42Q9BTD8 480 aaKnown RBP9.06□□□□□ -0.96
PSMD4-210ENST00000470396 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
PSMD4-210ENST00000470396 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 HTATSF1O43719 755 aaKnown RBP9.05□□□□□ -0.96
PSMD4-210ENST00000470396 ZBTB7AO95365 584 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 PTGER2P43116 358 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 WDR43Q15061 677 aaKnown RBP eCLIP9.05□□□□□ -0.96
PSMD4-210ENST00000470396 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 COL23A1Q86Y22 540 aaPredicted RBP9.05□□□□□ -0.96
PSMD4-210ENST00000470396 RUNDC1Q96C34 613 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
PSMD4-210ENST00000470396 SGIP1Q9BQI5 828 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 TFCP2L1Q9NZI6 479 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
PSMD4-210ENST00000470396 TEFQ10587 303 aa9.04□□□□□ -0.96
PSMD4-210ENST00000470396 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
PSMD4-210ENST00000470396 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
PSMD4-210ENST00000470396 CNTNAP4Q9C0A0 1308 aa9.04□□□□□ -0.96
PSMD4-210ENST00000470396 C4AP0C0L4 1744 aa9.03□□□□□ -0.96
PSMD4-210ENST00000470396 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
PSMD4-210ENST00000470396 BTBD11A6QL63 1104 aa9.03□□□□□ -0.96
PSMD4-210ENST00000470396 CRKLP46109 303 aaKnown RBP9.03□□□□□ -0.96
PSMD4-210ENST00000470396 RIPK4P57078 832 aa9.03□□□□□ -0.96
PSMD4-210ENST00000470396 INTS5Q6P9B9 1019 aaKnown RBP9.03□□□□□ -0.96
PSMD4-210ENST00000470396 RTF1Q92541 710 aaKnown RBP9.03□□□□□ -0.96
PSMD4-210ENST00000470396 PNNQ9H307 717 aaKnown RBP9.03□□□□□ -0.96
PSMD4-210ENST00000470396 MRS2Q9HD23 443 aa9.03□□□□□ -0.96
PSMD4-210ENST00000470396 HEG1Q9ULI3 1381 aa9.02□□□□□ -0.97
PSMD4-210ENST00000470396 SENP3-EIF4A1A0A087X0R7 540 aa9.02□□□□□ -0.97
PSMD4-210ENST00000470396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
PSMD4-210ENST00000470396 APAF1O14727 1248 aa9.02□□□□□ -0.97
PSMD4-210ENST00000470396 GNPATO15228 680 aa9.02□□□□□ -0.97
PSMD4-210ENST00000470396 CYP19A1P11511 503 aaPredicted RBP9.02□□□□□ -0.97
PSMD4-210ENST00000470396 TAF7Q15545 349 aaPredicted RBP9.02□□□□□ -0.97
PSMD4-210ENST00000470396 NEUROD2Q15784 382 aa9.02□□□□□ -0.97
PSMD4-210ENST00000470396 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
PSMD4-210ENST00000470396 AK7Q96M32 723 aa9.02□□□□□ -0.97
PSMD4-210ENST00000470396 ATF5Q9Y2D1 282 aaPredicted RBP9.02□□□□□ -0.97
PSMD4-210ENST00000470396 PHF14O94880 888 aa9.01□□□□□ -0.97
PSMD4-210ENST00000470396 NEFMP07197 916 aa9.01□□□□□ -0.97
PSMD4-210ENST00000470396 SSFA2P28290 1259 aa9.01□□□□□ -0.97
PSMD4-210ENST00000470396 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
PSMD4-210ENST00000470396 MTFR1LQ9H019 292 aa9.01□□□□□ -0.97
PSMD4-210ENST00000470396 SPON1Q9HCB6 807 aa9.01□□□□□ -0.97
PSMD4-210ENST00000470396 RPS6KA4O75676 772 aa9□□□□□ -0.97
PSMD4-210ENST00000470396 MSL1Q68DK7 614 aa9□□□□□ -0.97
PSMD4-210ENST00000470396 TTC5Q8N0Z6 440 aa9□□□□□ -0.97
PSMD4-210ENST00000470396 FMNL2Q96PY5 1086 aa9□□□□□ -0.97
PSMD4-210ENST00000470396 ZBTB1Q9Y2K1 713 aa9□□□□□ -0.97
PSMD4-210ENST00000470396 USP16Q9Y5T5 823 aa9□□□□□ -0.97
PSMD4-210ENST00000470396 SOS1Q07889 1333 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms