RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 U2AF1L5P0DN76 240 aaPredicted RBP18.93■□□□□ 0.62
TOP3B-215ENST00000470338 U2AF1Q01081 240 aaKnown RBP eCLIP18.93■□□□□ 0.62
TOP3B-215ENST00000470338 TFCP2L1Q9NZI6 479 aa18.93■□□□□ 0.62
TOP3B-215ENST00000470338 C4BP0C0L5 1744 aa18.93■□□□□ 0.62
TOP3B-215ENST00000470338 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
TOP3B-215ENST00000470338 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
TOP3B-215ENST00000470338 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
TOP3B-215ENST00000470338 GAS2L2Q8NHY3 880 aa18.92■□□□□ 0.62
TOP3B-215ENST00000470338 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
TOP3B-215ENST00000470338 MRC1P22897 1456 aa18.91■□□□□ 0.62
TOP3B-215ENST00000470338 UBR3Q6ZT12 1888 aa18.91■□□□□ 0.62
TOP3B-215ENST00000470338 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
TOP3B-215ENST00000470338 SLC52A2Q9HAB3 445 aa18.91■□□□□ 0.62
TOP3B-215ENST00000470338 COL24A1Q17RW2 1714 aa18.91■□□□□ 0.62
TOP3B-215ENST00000470338 ATP6V1AP38606 617 aa18.9■□□□□ 0.62
TOP3B-215ENST00000470338 SLC16A10Q8TF71 515 aa18.9■□□□□ 0.62
TOP3B-215ENST00000470338 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
TOP3B-215ENST00000470338 PTGER2P43116 358 aa18.89■□□□□ 0.61
TOP3B-215ENST00000470338 ITPK1Q13572 414 aa18.89■□□□□ 0.61
TOP3B-215ENST00000470338 SLC4A9Q96Q91 983 aa18.89■□□□□ 0.61
TOP3B-215ENST00000470338 ATF5Q9Y2D1 282 aaPredicted RBP18.89■□□□□ 0.61
TOP3B-215ENST00000470338 MAP3K5Q99683 1374 aa18.89■□□□□ 0.61
TOP3B-215ENST00000470338 COL5A3P25940 1745 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-215ENST00000470338 LINC00116Q8NCU8 138 aa18.88■□□□□ 0.61
TOP3B-215ENST00000470338 SIPA1L3O60292 1781 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-215ENST00000470338 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
TOP3B-215ENST00000470338 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
TOP3B-215ENST00000470338 SGIP1Q9BQI5 828 aa18.87■□□□□ 0.61
TOP3B-215ENST00000470338 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
TOP3B-215ENST00000470338 CICQ96RK0 1608 aaPredicted RBP18.86■□□□□ 0.61
TOP3B-215ENST00000470338 COL23A1Q86Y22 540 aaPredicted RBP18.86■□□□□ 0.61
TOP3B-215ENST00000470338 FLAD1Q8NFF5 587 aa18.86■□□□□ 0.61
TOP3B-215ENST00000470338 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
TOP3B-215ENST00000470338 DLG5Q8TDM6 1919 aa18.85■□□□□ 0.61
TOP3B-215ENST00000470338 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
TOP3B-215ENST00000470338 AK7Q96M32 723 aa18.85■□□□□ 0.61
TOP3B-215ENST00000470338 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
TOP3B-215ENST00000470338 PTCD1O75127 700 aaKnown RBP18.84■□□□□ 0.61
TOP3B-215ENST00000470338 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
TOP3B-215ENST00000470338 UBR2Q8IWV8 1755 aa18.83■□□□□ 0.61
TOP3B-215ENST00000470338 TJP1Q07157 1748 aa18.83■□□□□ 0.61
TOP3B-215ENST00000470338 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.61
TOP3B-215ENST00000470338 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
TOP3B-215ENST00000470338 AMIGO3Q86WK7 504 aa18.83■□□□□ 0.6
TOP3B-215ENST00000470338 PLEKHF1Q96S99 279 aa18.83■□□□□ 0.6
TOP3B-215ENST00000470338 SSFA2P28290 1259 aa18.82■□□□□ 0.6
TOP3B-215ENST00000470338 TEFQ10587 303 aa18.81■□□□□ 0.6
TOP3B-215ENST00000470338 SLC39A6Q13433 755 aa18.81■□□□□ 0.6
TOP3B-215ENST00000470338 PNNQ9H307 717 aaKnown RBP18.81■□□□□ 0.6
TOP3B-215ENST00000470338 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
TOP3B-215ENST00000470338 CNTNAP4Q9C0A0 1308 aa18.8■□□□□ 0.6
TOP3B-215ENST00000470338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.8■□□□□ 0.6
TOP3B-215ENST00000470338 MSH5O43196 834 aa18.8■□□□□ 0.6
TOP3B-215ENST00000470338 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
TOP3B-215ENST00000470338 GNPATO15228 680 aa18.79■□□□□ 0.6
TOP3B-215ENST00000470338 NEFMP07197 916 aa18.79■□□□□ 0.6
TOP3B-215ENST00000470338 SMIM5Q71RC9 77 aa18.79■□□□□ 0.6
TOP3B-215ENST00000470338 ARXQ96QS3 562 aa18.79■□□□□ 0.6
TOP3B-215ENST00000470338 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
TOP3B-215ENST00000470338 RPS6KA4O75676 772 aa18.77■□□□□ 0.6
TOP3B-215ENST00000470338 PHF14O94880 888 aa18.77■□□□□ 0.6
TOP3B-215ENST00000470338 POLD1P28340 1107 aa18.77■□□□□ 0.6
TOP3B-215ENST00000470338 VSIG10Q8N0Z9 540 aa18.77■□□□□ 0.6
TOP3B-215ENST00000470338 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.6
TOP3B-215ENST00000470338 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
TOP3B-215ENST00000470338 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
TOP3B-215ENST00000470338 MCM10Q7L590 875 aa18.76■□□□□ 0.59
TOP3B-215ENST00000470338 ADRA2BP18089 450 aa18.75■□□□□ 0.59
TOP3B-215ENST00000470338 NFE2L2Q16236 605 aa18.75■□□□□ 0.59
TOP3B-215ENST00000470338 TRAPPC3LQ5T215 181 aa18.75■□□□□ 0.59
TOP3B-215ENST00000470338 DNAJC10Q8IXB1 793 aa18.75■□□□□ 0.59
TOP3B-215ENST00000470338 TTC5Q8N0Z6 440 aa18.75■□□□□ 0.59
TOP3B-215ENST00000470338 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
TOP3B-215ENST00000470338 INTS5Q6P9B9 1019 aaKnown RBP18.74■□□□□ 0.59
TOP3B-215ENST00000470338 FHDC1Q9C0D6 1143 aaPredicted RBP18.74■□□□□ 0.59
TOP3B-215ENST00000470338 C4AP0C0L4 1744 aa18.74■□□□□ 0.59
TOP3B-215ENST00000470338 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
TOP3B-215ENST00000470338 BTBD11A6QL63 1104 aa18.73■□□□□ 0.59
TOP3B-215ENST00000470338 CYP19A1P11511 503 aaPredicted RBP18.73■□□□□ 0.59
TOP3B-215ENST00000470338 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
TOP3B-215ENST00000470338 ARHGEF1Q92888 912 aaKnown RBP18.73■□□□□ 0.59
TOP3B-215ENST00000470338 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
TOP3B-215ENST00000470338 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
TOP3B-215ENST00000470338 HEG1Q9ULI3 1381 aa18.71■□□□□ 0.59
TOP3B-215ENST00000470338 KCNQ3O43525 872 aa18.71■□□□□ 0.59
TOP3B-215ENST00000470338 TAF7Q15545 349 aaPredicted RBP18.71■□□□□ 0.59
TOP3B-215ENST00000470338 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
TOP3B-215ENST00000470338 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
TOP3B-215ENST00000470338 FMNL2Q96PY5 1086 aa18.7■□□□□ 0.58
TOP3B-215ENST00000470338 TEX13AQ9BXU3 409 aaPredicted RBP18.7■□□□□ 0.58
TOP3B-215ENST00000470338 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
TOP3B-215ENST00000470338 RFC4P35249 363 aa18.69■□□□□ 0.58
TOP3B-215ENST00000470338 STARD3NLO95772 234 aa18.68■□□□□ 0.58
TOP3B-215ENST00000470338 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
TOP3B-215ENST00000470338 RUNDC1Q96C34 613 aa18.68■□□□□ 0.58
TOP3B-215ENST00000470338 KDM3BQ7LBC6 1761 aa18.68■□□□□ 0.58
TOP3B-215ENST00000470338 RIPK4P57078 832 aa18.67■□□□□ 0.58
TOP3B-215ENST00000470338 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
TOP3B-215ENST00000470338 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
TOP3B-215ENST00000470338 SOS1Q07889 1333 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms