RNA–Protein interactions for RNA: ENST00000470318.1

TSPAN1-204, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 590 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-204ENST00000470318 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 FCHSD2O94868 740 aa20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 U2AF1L5P0DN76 240 aaPredicted RBP20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 SIK1P57059 783 aa20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 U2AF1Q01081 240 aaKnown RBP eCLIP20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 SPON1Q9HCB6 807 aa20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
TSPAN1-204ENST00000470318 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
TSPAN1-204ENST00000470318 PDGFDQ9GZP0 370 aaPredicted RBP20.54■□□□□ 0.88
TSPAN1-204ENST00000470318 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
TSPAN1-204ENST00000470318 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
TSPAN1-204ENST00000470318 TJP1Q07157 1748 aa20.53■□□□□ 0.88
TSPAN1-204ENST00000470318 RNMTO43148 476 aaKnown RBP20.52■□□□□ 0.88
TSPAN1-204ENST00000470318 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
TSPAN1-204ENST00000470318 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
TSPAN1-204ENST00000470318 TFCP2L1Q9NZI6 479 aa20.52■□□□□ 0.88
TSPAN1-204ENST00000470318 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.87
TSPAN1-204ENST00000470318 MTFR1LQ9H019 292 aa20.51■□□□□ 0.87
TSPAN1-204ENST00000470318 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
TSPAN1-204ENST00000470318 SLC16A10Q8TF71 515 aa20.5■□□□□ 0.87
TSPAN1-204ENST00000470318 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
TSPAN1-204ENST00000470318 ZNF316A6NFI3 1004 aaPredicted RBP20.49■□□□□ 0.87
TSPAN1-204ENST00000470318 ZBTB7AO95365 584 aa20.49■□□□□ 0.87
TSPAN1-204ENST00000470318 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
TSPAN1-204ENST00000470318 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
TSPAN1-204ENST00000470318 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
TSPAN1-204ENST00000470318 CEMIPQ8WUJ3 1361 aa20.47■□□□□ 0.87
TSPAN1-204ENST00000470318 ITPK1Q13572 414 aa20.47■□□□□ 0.87
TSPAN1-204ENST00000470318 LINC00116Q8NCU8 138 aa20.47■□□□□ 0.87
TSPAN1-204ENST00000470318 FLAD1Q8NFF5 587 aa20.47■□□□□ 0.87
TSPAN1-204ENST00000470318 AK7Q96M32 723 aa20.47■□□□□ 0.87
TSPAN1-204ENST00000470318 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
TSPAN1-204ENST00000470318 NEFMP07197 916 aa20.46■□□□□ 0.87
TSPAN1-204ENST00000470318 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
TSPAN1-204ENST00000470318 PNNQ9H307 717 aaKnown RBP20.46■□□□□ 0.87
TSPAN1-204ENST00000470318 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
TSPAN1-204ENST00000470318 PTGER2P43116 358 aa20.45■□□□□ 0.86
TSPAN1-204ENST00000470318 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
TSPAN1-204ENST00000470318 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
TSPAN1-204ENST00000470318 SGIP1Q9BQI5 828 aa20.44■□□□□ 0.86
TSPAN1-204ENST00000470318 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
TSPAN1-204ENST00000470318 SSFA2P28290 1259 aa20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 TEFQ10587 303 aa20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 COL23A1Q86Y22 540 aaPredicted RBP20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 ATF5Q9Y2D1 282 aaPredicted RBP20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 C4AP0C0L4 1744 aa20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 CNTNAP4Q9C0A0 1308 aa20.43■□□□□ 0.86
TSPAN1-204ENST00000470318 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
TSPAN1-204ENST00000470318 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
TSPAN1-204ENST00000470318 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
TSPAN1-204ENST00000470318 GNPATO15228 680 aa20.4■□□□□ 0.86
TSPAN1-204ENST00000470318 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
TSPAN1-204ENST00000470318 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
TSPAN1-204ENST00000470318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.39■□□□□ 0.85
TSPAN1-204ENST00000470318 SLC39A6Q13433 755 aa20.39■□□□□ 0.85
TSPAN1-204ENST00000470318 MSH5O43196 834 aa20.38■□□□□ 0.85
TSPAN1-204ENST00000470318 AMIGO3Q86WK7 504 aa20.38■□□□□ 0.85
TSPAN1-204ENST00000470318 TTC5Q8N0Z6 440 aa20.38■□□□□ 0.85
TSPAN1-204ENST00000470318 VSIG10Q8N0Z9 540 aa20.38■□□□□ 0.85
TSPAN1-204ENST00000470318 KDM3BQ7LBC6 1761 aa20.37■□□□□ 0.85
TSPAN1-204ENST00000470318 POLD1P28340 1107 aa20.37■□□□□ 0.85
TSPAN1-204ENST00000470318 RTCBQ9Y3I0 505 aaKnown RBP20.37■□□□□ 0.85
TSPAN1-204ENST00000470318 PHF14O94880 888 aa20.36■□□□□ 0.85
TSPAN1-204ENST00000470318 ADRA2BP18089 450 aa20.36■□□□□ 0.85
TSPAN1-204ENST00000470318 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
TSPAN1-204ENST00000470318 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
TSPAN1-204ENST00000470318 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
TSPAN1-204ENST00000470318 MCM10Q7L590 875 aa20.35■□□□□ 0.85
TSPAN1-204ENST00000470318 ARXQ96QS3 562 aa20.35■□□□□ 0.85
TSPAN1-204ENST00000470318 RPS6KA4O75676 772 aa20.34■□□□□ 0.85
TSPAN1-204ENST00000470318 CRKLP46109 303 aaKnown RBP20.34■□□□□ 0.85
TSPAN1-204ENST00000470318 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
TSPAN1-204ENST00000470318 BTBD11A6QL63 1104 aa20.33■□□□□ 0.85
TSPAN1-204ENST00000470318 DNAJC10Q8IXB1 793 aa20.33■□□□□ 0.85
TSPAN1-204ENST00000470318 LAMB4A4D0S4 1761 aa20.33■□□□□ 0.84
TSPAN1-204ENST00000470318 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
TSPAN1-204ENST00000470318 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
TSPAN1-204ENST00000470318 CYP19A1P11511 503 aaPredicted RBP20.31■□□□□ 0.84
TSPAN1-204ENST00000470318 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
TSPAN1-204ENST00000470318 ZNF496Q96IT1 587 aaPredicted RBP20.31■□□□□ 0.84
TSPAN1-204ENST00000470318 FMNL2Q96PY5 1086 aa20.31■□□□□ 0.84
TSPAN1-204ENST00000470318 CCDC87Q9NVE4 849 aa20.31■□□□□ 0.84
TSPAN1-204ENST00000470318 INTS5Q6P9B9 1019 aaKnown RBP20.3■□□□□ 0.84
TSPAN1-204ENST00000470318 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
TSPAN1-204ENST00000470318 FHDC1Q9C0D6 1143 aaPredicted RBP20.3■□□□□ 0.84
TSPAN1-204ENST00000470318 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
TSPAN1-204ENST00000470318 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
TSPAN1-204ENST00000470318 ANP32CO43423 234 aa20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 STARD3NLO95772 234 aa20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 TMPOP42166 694 aaKnown RBP20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 LMOD3Q0VAK6 560 aa20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 RUNDC1Q96C34 613 aa20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 SYT17Q9BSW7 474 aa20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
TSPAN1-204ENST00000470318 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
TSPAN1-204ENST00000470318 RFC4P35249 363 aa20.27■□□□□ 0.84
TSPAN1-204ENST00000470318 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms