RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 CRB1P82279 1406 aa16.03■□□□□ 0.16
SFXN3-205ENST00000470252 MCCP23508 829 aa16.03■□□□□ 0.16
SFXN3-205ENST00000470252 TERF1P54274 439 aa16.03■□□□□ 0.16
SFXN3-205ENST00000470252 ZKSCAN5Q9Y2L8 839 aa16.03■□□□□ 0.16
SFXN3-205ENST00000470252 PRR36Q9H6K5 1346 aa16.02■□□□□ 0.16
SFXN3-205ENST00000470252 BRD1O95696 1058 aa16.02■□□□□ 0.16
SFXN3-205ENST00000470252 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.16
SFXN3-205ENST00000470252 SPATA31D1Q6ZQQ2 1576 aa16.02■□□□□ 0.16
SFXN3-205ENST00000470252 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 GNAI2P04899 355 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 RNF214Q8ND24 703 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 TSPYL4Q9UJ04 414 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 PALD1Q9ULE6 856 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 TCHHQ07283 1943 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
SFXN3-205ENST00000470252 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 ANO2Q9NQ90 1003 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 RIMS1Q86UR5 1692 aaKnown RBP16.01■□□□□ 0.15
SFXN3-205ENST00000470252 TRIM6-TRIM34B2RNG4 842 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 MX1P20591 662 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 RBM10P98175 930 aaKnown RBP16.01■□□□□ 0.15
SFXN3-205ENST00000470252 CUL4AQ13619 759 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 LRRCC1Q9C099 1032 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
SFXN3-205ENST00000470252 SOX12O15370 315 aa16■□□□□ 0.15
SFXN3-205ENST00000470252 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
SFXN3-205ENST00000470252 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
SFXN3-205ENST00000470252 FOXO3O43524 673 aa16■□□□□ 0.15
SFXN3-205ENST00000470252 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
SFXN3-205ENST00000470252 CHMLP26374 656 aa15.99■□□□□ 0.15
SFXN3-205ENST00000470252 MCM5P33992 734 aa15.99■□□□□ 0.15
SFXN3-205ENST00000470252 TSPY26PQ9H489 355 aa15.99■□□□□ 0.15
SFXN3-205ENST00000470252 ANAPC15P60006 121 aa15.98■□□□□ 0.15
SFXN3-205ENST00000470252 FOXD4L6Q3SYB3 417 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-205ENST00000470252 FOXD4L3Q6VB84 417 aaPredicted RBP15.98■□□□□ 0.15
SFXN3-205ENST00000470252 INTS4Q96HW7 963 aaKnown RBP15.98■□□□□ 0.15
SFXN3-205ENST00000470252 CSPP1Q1MSJ5 1256 aa15.98■□□□□ 0.15
SFXN3-205ENST00000470252 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
SFXN3-205ENST00000470252 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
SFXN3-205ENST00000470252 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
SFXN3-205ENST00000470252 FMN2Q9NZ56 1722 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 UQCRHLA0A096LP55 91 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 UQCRHP07919 91 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 MTHFSDQ2M296 383 aaKnown RBP15.97■□□□□ 0.15
SFXN3-205ENST00000470252 SYAP1Q96A49 352 aaPredicted RBP15.97■□□□□ 0.15
SFXN3-205ENST00000470252 NALCNQ8IZF0 1738 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 ACEP12821 1306 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 UPF3BQ9BZI7 483 aaKnown RBP15.97■□□□□ 0.15
SFXN3-205ENST00000470252 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
SFXN3-205ENST00000470252 TECPR2O15040 1411 aa15.96■□□□□ 0.15
SFXN3-205ENST00000470252 MAP3K19Q56UN5 1328 aa15.96■□□□□ 0.15
SFXN3-205ENST00000470252 SIRT1Q96EB6 747 aa15.96■□□□□ 0.15
SFXN3-205ENST00000470252 SSH2Q76I76 1423 aa15.96■□□□□ 0.15
SFXN3-205ENST00000470252 PTMAP06454 111 aaKnown RBP15.96■□□□□ 0.14
SFXN3-205ENST00000470252 GNAI3P08754 354 aa15.96■□□□□ 0.14
SFXN3-205ENST00000470252 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.14
SFXN3-205ENST00000470252 GDPD2Q9HCC8 539 aa15.96■□□□□ 0.14
SFXN3-205ENST00000470252 XRN1Q8IZH2 1706 aaKnown RBP15.96■□□□□ 0.14
SFXN3-205ENST00000470252 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
SFXN3-205ENST00000470252 FAM208AQ9UK61 1670 aaKnown RBP15.95■□□□□ 0.14
SFXN3-205ENST00000470252 CACNA1FO60840 1977 aa15.95■□□□□ 0.14
SFXN3-205ENST00000470252 UNC5CLQ8IV45 518 aa15.95■□□□□ 0.14
SFXN3-205ENST00000470252 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 GADD45BO75293 160 aaPredicted RBP15.94■□□□□ 0.14
SFXN3-205ENST00000470252 FLIIQ13045 1269 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
SFXN3-205ENST00000470252 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 SRCIN1Q9C0H9 1055 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 AGLP35573 1532 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 ADAMTSL3P82987 1691 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 TOPAZ1Q8N9V7 1692 aa15.94■□□□□ 0.14
SFXN3-205ENST00000470252 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
SFXN3-205ENST00000470252 PHF14O94880 888 aa15.93■□□□□ 0.14
SFXN3-205ENST00000470252 STAP2Q9UGK3 403 aa15.93■□□□□ 0.14
SFXN3-205ENST00000470252 USP48Q86UV5 1035 aa15.93■□□□□ 0.14
SFXN3-205ENST00000470252 LRRFIP2Q9Y608 721 aaKnown RBP15.93■□□□□ 0.14
SFXN3-205ENST00000470252 USP6P35125 1406 aa15.93■□□□□ 0.14
SFXN3-205ENST00000470252 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
SFXN3-205ENST00000470252 WDR33Q9C0J8 1336 aaKnown RBP15.92■□□□□ 0.14
SFXN3-205ENST00000470252 CCDC30Q5VVM6 783 aa15.92■□□□□ 0.14
SFXN3-205ENST00000470252 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
SFXN3-205ENST00000470252 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.92■□□□□ 0.14
SFXN3-205ENST00000470252 IL25Q9H293 177 aa15.92■□□□□ 0.14
SFXN3-205ENST00000470252 IL1RAPL2Q9NP60 686 aa15.92■□□□□ 0.14
SFXN3-205ENST00000470252 MAP7D2Q96T17 732 aa15.91■□□□□ 0.14
SFXN3-205ENST00000470252 USP31Q70CQ4 1352 aa15.91■□□□□ 0.14
SFXN3-205ENST00000470252 SASS6Q6UVJ0 657 aa15.91■□□□□ 0.14
SFXN3-205ENST00000470252 IL17RAQ96F46 866 aa15.91■□□□□ 0.14
SFXN3-205ENST00000470252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
SFXN3-205ENST00000470252 N4BP2Q86UW6 1770 aaPredicted RBP15.9■□□□□ 0.14
SFXN3-205ENST00000470252 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
SFXN3-205ENST00000470252 FER1L4A9Z1Z3 1794 aa15.9■□□□□ 0.14
SFXN3-205ENST00000470252 PLEKHG3A1L390 1219 aa15.9■□□□□ 0.14
SFXN3-205ENST00000470252 HSPA4P34932 840 aa15.9■□□□□ 0.14
SFXN3-205ENST00000470252 KIAA2012Q0VF49 1180 aa15.9■□□□□ 0.14
SFXN3-205ENST00000470252 NUTM1Q86Y26 1132 aa15.9■□□□□ 0.14
SFXN3-205ENST00000470252 AOX1Q06278 1338 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms