RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ZBTB7BO15156 539 aaPredicted RBP8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 CHD1LQ86WJ1 897 aa8.61□□□□□ -1.03
GAPVD1-215ENST00000470056 GNAI2P04899 355 aa8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 OVOS2A0A0G2JMS6 1433 aa8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 FLIIQ13045 1269 aa8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 PRDM11Q9NQV5 511 aa8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 USP54Q70EL1 1684 aa8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 SKOR2Q2VWA4 1001 aaPredicted RBP8.6□□□□□ -1.03
GAPVD1-215ENST00000470056 NUCB1Q02818 461 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 SLIT3O75094 1523 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 ERBB3P21860 1342 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 HSP90AB4PQ58FF6 505 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 ARXQ96QS3 562 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.03
GAPVD1-215ENST00000470056 MIS18AQ9NYP9 233 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 NFAT5O94916 1531 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 RNMTO43148 476 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 UBTFL1P0CB47 393 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 C8orf34Q49A92 452 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 ISY1Q9ULR0 285 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 EIF2S2P20042 333 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 MCCP23508 829 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 ANKRD44Q8N8A2 993 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 PEAK1Q9H792 1746 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 PHF14O94880 888 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 GSE1Q14687 1217 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 SPATA31A3Q5VYP0 1347 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 IL17REQ8NFR9 667 aa8.58□□□□□ -1.04
GAPVD1-215ENST00000470056 ABCC6O95255 1503 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 LRRC59Q96AG4 307 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 LNPKQ9C0E8 428 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 SLAIN2Q9P270 581 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 EVA1CP58658 441 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 BMP2KLQ5H9B9 411 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 HYPKQ9NX55 129 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 RGPD1P0DJD0 1748 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 CEMIPQ8WUJ3 1361 aa8.57□□□□□ -1.04
GAPVD1-215ENST00000470056 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
GAPVD1-215ENST00000470056 CDC45O75419 566 aa8.56□□□□□ -1.04
GAPVD1-215ENST00000470056 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
GAPVD1-215ENST00000470056 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
GAPVD1-215ENST00000470056 CPDO75976 1380 aa8.56□□□□□ -1.04
GAPVD1-215ENST00000470056 TOM1L2Q6ZVM7 507 aa8.56□□□□□ -1.04
GAPVD1-215ENST00000470056 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 DNAAF4Q8WXU2 420 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 KRT24Q2M2I5 525 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 BRINP3Q76B58 766 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 PCDH11XQ9BZA7 1347 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 PCDH11YQ9BZA8 1340 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 ALDH1L1O75891 902 aa8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 OS9Q13438 667 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-215ENST00000470056 MFAP1P55081 439 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 CABP4P57796 275 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 NECTIN2Q92692 538 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 C9orf78Q9NZ63 289 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 GPATCH3Q96I76 525 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 RAB11FIP3O75154 756 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 CEP85Q6P2H3 762 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
GAPVD1-215ENST00000470056 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
GAPVD1-215ENST00000470056 ERC1Q8IUD2 1116 aa8.53□□□□□ -1.04
GAPVD1-215ENST00000470056 C22orf23Q9BZE7 217 aa8.53□□□□□ -1.04
GAPVD1-215ENST00000470056 LRRCC1Q9C099 1032 aa8.53□□□□□ -1.04
GAPVD1-215ENST00000470056 REC8O95072 547 aa8.53□□□□□ -1.04
GAPVD1-215ENST00000470056 SLC52A2Q9HAB3 445 aa8.53□□□□□ -1.04
GAPVD1-215ENST00000470056 SKAP1Q86WV1 359 aa8.52□□□□□ -1.04
GAPVD1-215ENST00000470056 MEIS3Q99687 375 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 WDR17Q8IZU2 1322 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 SNRPA1P09661 255 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 PHKG2P15735 406 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 PHRF1Q9P1Y6 1649 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 F6X3S4 739 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 GOLGA6L4A6NEF3 574 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 IL2RBP14784 551 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 CHRNA2Q15822 529 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 KSR2Q6VAB6 950 aa8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 RGPD8O14715 1765 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-215ENST00000470056 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 IL27Q8NEV9 243 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 CHPF2Q9P2E5 772 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 ZNF335Q9H4Z2 1342 aaPredicted RBP8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 ERBB4Q15303 1308 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 APBB1O00213 710 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 MSH5O43196 834 aa8.51□□□□□ -1.05
GAPVD1-215ENST00000470056 G2E3Q7L622 706 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms