RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 SCN11AQ9UI33 1791 aa35.79■■■■□ 3.32
SNX5-206ENST00000469704 MTHFSDQ2M296 383 aaKnown RBP35.78■■■■□ 3.32
SNX5-206ENST00000469704 AK7Q96M32 723 aa35.78■■■■□ 3.32
SNX5-206ENST00000469704 ARXQ96QS3 562 aa35.78■■■■□ 3.32
SNX5-206ENST00000469704 NUDCQ9Y266 331 aa35.78■■■■□ 3.32
SNX5-206ENST00000469704 COL24A1Q17RW2 1714 aa35.77■■■■□ 3.32
SNX5-206ENST00000469704 ZNF831Q5JPB2 1677 aa35.75■■■■□ 3.31
SNX5-206ENST00000469704 MSH5O43196 834 aa35.75■■■■□ 3.31
SNX5-206ENST00000469704 POLD1P28340 1107 aa35.75■■■■□ 3.31
SNX5-206ENST00000469704 ITPK1Q13572 414 aa35.75■■■■□ 3.31
SNX5-206ENST00000469704 LINC00116Q8NCU8 138 aa35.75■■■■□ 3.31
SNX5-206ENST00000469704 RBM42Q9BTD8 480 aaKnown RBP35.73■■■■□ 3.31
SNX5-206ENST00000469704 LGR6Q9HBX8 967 aa35.73■■■■□ 3.31
SNX5-206ENST00000469704 RNMTO43148 476 aaKnown RBP35.72■■■■□ 3.31
SNX5-206ENST00000469704 SLC52A2Q9HAB3 445 aa35.72■■■■□ 3.31
SNX5-206ENST00000469704 SYT17Q9BSW7 474 aa35.71■■■■□ 3.31
SNX5-206ENST00000469704 FHDC1Q9C0D6 1143 aaPredicted RBP35.71■■■■□ 3.31
SNX5-206ENST00000469704 UBR3Q6ZT12 1888 aa35.71■■■■□ 3.31
SNX5-206ENST00000469704 SSFA2P28290 1259 aa35.7■■■■□ 3.31
SNX5-206ENST00000469704 SLC4A9Q96Q91 983 aa35.7■■■■□ 3.31
SNX5-206ENST00000469704 DCAF8L1A6NGE4 600 aa35.69■■■■□ 3.3
SNX5-206ENST00000469704 GAS2L2Q8NHY3 880 aa35.69■■■■□ 3.3
SNX5-206ENST00000469704 MAP3K5Q99683 1374 aa35.67■■■■□ 3.3
SNX5-206ENST00000469704 VIRMAQ69YN4 1812 aaKnown RBP35.67■■■■□ 3.3
SNX5-206ENST00000469704 RC3H1Q5TC82 1133 aaKnown RBP35.67■■■■□ 3.3
SNX5-206ENST00000469704 ADAMTS7Q9UKP4 1686 aa35.66■■■■□ 3.3
SNX5-206ENST00000469704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.66■■■■□ 3.3
SNX5-206ENST00000469704 RSPH6AQ9H0K4 717 aa35.66■■■■□ 3.3
SNX5-206ENST00000469704 PTCD1O75127 700 aaKnown RBP35.64■■■■□ 3.3
SNX5-206ENST00000469704 FCHSD2O94868 740 aa35.64■■■■□ 3.3
SNX5-206ENST00000469704 U2AF1L5P0DN76 240 aaPredicted RBP35.64■■■■□ 3.3
SNX5-206ENST00000469704 U2AF1Q01081 240 aaKnown RBP eCLIP35.64■■■■□ 3.3
SNX5-206ENST00000469704 AMIGO3Q86WK7 504 aa35.64■■■■□ 3.3
SNX5-206ENST00000469704 MRC1P22897 1456 aa35.64■■■■□ 3.3
SNX5-206ENST00000469704 GNAT3A8MTJ3 354 aa35.63■■■■□ 3.29
SNX5-206ENST00000469704 GNPATO15228 680 aa35.63■■■■□ 3.29
SNX5-206ENST00000469704 PHF14O94880 888 aa35.62■■■■□ 3.29
SNX5-206ENST00000469704 PRKAR2BP31323 418 aa35.62■■■■□ 3.29
SNX5-206ENST00000469704 DDX10Q13206 875 aaKnown RBP35.6■■■■□ 3.29
SNX5-206ENST00000469704 PHACTR3Q96KR7 559 aa35.6■■■■□ 3.29
SNX5-206ENST00000469704 RTCBQ9Y3I0 505 aaKnown RBP35.6■■■■□ 3.29
SNX5-206ENST00000469704 COL5A3P25940 1745 aaPredicted RBP35.6■■■■□ 3.29
SNX5-206ENST00000469704 CNTNAP4Q9C0A0 1308 aa35.59■■■■□ 3.29
SNX5-206ENST00000469704 ZEB1P37275 1124 aaPredicted RBP35.58■■■■□ 3.29
SNX5-206ENST00000469704 RALBP1Q15311 655 aa35.58■■■■□ 3.29
SNX5-206ENST00000469704 SMIM5Q71RC9 77 aa35.57■■■■□ 3.28
SNX5-206ENST00000469704 IL17REQ8NFR9 667 aa35.57■■■■□ 3.28
SNX5-206ENST00000469704 ADRA2BP18089 450 aa35.56■■■■□ 3.28
SNX5-206ENST00000469704 TRAPPC3LQ5T215 181 aa35.56■■■■□ 3.28
SNX5-206ENST00000469704 MSL1Q68DK7 614 aa35.56■■■■□ 3.28
SNX5-206ENST00000469704 RPS6KA4O75676 772 aa35.55■■■■□ 3.28
SNX5-206ENST00000469704 CICQ96RK0 1608 aaPredicted RBP35.54■■■■□ 3.28
SNX5-206ENST00000469704 MYH14Q7Z406 1995 aaKnown RBP35.53■■■■□ 3.28
SNX5-206ENST00000469704 TEFQ10587 303 aa35.53■■■■□ 3.28
SNX5-206ENST00000469704 SLC39A6Q13433 755 aa35.53■■■■□ 3.28
SNX5-206ENST00000469704 CRKLP46109 303 aaKnown RBP35.5■■■■□ 3.27
SNX5-206ENST00000469704 VSIG10Q8N0Z9 540 aa35.5■■■■□ 3.27
SNX5-206ENST00000469704 ARHGEF1Q92888 912 aaKnown RBP35.49■■■■□ 3.27
SNX5-206ENST00000469704 CEMIPQ8WUJ3 1361 aa35.49■■■■□ 3.27
SNX5-206ENST00000469704 TJP1Q07157 1748 aa35.49■■■■□ 3.27
SNX5-206ENST00000469704 KLHL34Q8N239 644 aa35.48■■■■□ 3.27
SNX5-206ENST00000469704 HTATSF1O43719 755 aaKnown RBP35.46■■■■□ 3.27
SNX5-206ENST00000469704 TTC5Q8N0Z6 440 aa35.46■■■■□ 3.27
SNX5-206ENST00000469704 RFC4P35249 363 aa35.45■■■■□ 3.27
SNX5-206ENST00000469704 DNAJC10Q8IXB1 793 aa35.45■■■■□ 3.27
SNX5-206ENST00000469704 NLGN1Q8N2Q7 840 aa35.45■■■■□ 3.27
SNX5-206ENST00000469704 RTF1Q92541 710 aaKnown RBP35.45■■■■□ 3.27
SNX5-206ENST00000469704 CD2APQ9Y5K6 639 aa35.45■■■■□ 3.27
SNX5-206ENST00000469704 KCPQ6ZWJ8 1503 aa35.45■■■■□ 3.27
SNX5-206ENST00000469704 SIPA1L3O60292 1781 aaPredicted RBP35.44■■■■□ 3.26
SNX5-206ENST00000469704 NEFMP07197 916 aa35.44■■■■□ 3.26
SNX5-206ENST00000469704 ZNF790Q6PG37 636 aa35.44■■■■□ 3.26
SNX5-206ENST00000469704 PNNQ9H307 717 aaKnown RBP35.44■■■■□ 3.26
SNX5-206ENST00000469704 INTS5Q6P9B9 1019 aaKnown RBP35.43■■■■□ 3.26
SNX5-206ENST00000469704 UBR2Q8IWV8 1755 aa35.43■■■■□ 3.26
SNX5-206ENST00000469704 CYP19A1P11511 503 aaPredicted RBP35.42■■■■□ 3.26
SNX5-206ENST00000469704 CCDC87Q9NVE4 849 aa35.41■■■■□ 3.26
SNX5-206ENST00000469704 NLGN2Q8NFZ4 835 aa35.39■■■■□ 3.26
SNX5-206ENST00000469704 MYBBP1AQ9BQG0 1328 aaKnown RBP35.38■■■■□ 3.25
SNX5-206ENST00000469704 PLEKHF1Q96S99 279 aa35.38■■■■□ 3.25
SNX5-206ENST00000469704 TEX13AQ9BXU3 409 aaPredicted RBP35.38■■■■□ 3.25
SNX5-206ENST00000469704 UTRNP46939 3433 aa35.37■■■■□ 3.25
SNX5-206ENST00000469704 GYS1P13807 737 aa35.37■■■■□ 3.25
SNX5-206ENST00000469704 ZNF496Q96IT1 587 aaPredicted RBP35.37■■■■□ 3.25
SNX5-206ENST00000469704 BTBD11A6QL63 1104 aa35.36■■■■□ 3.25
SNX5-206ENST00000469704 STARD3NLO95772 234 aa35.36■■■■□ 3.25
SNX5-206ENST00000469704 GPR162Q16538 588 aa35.35■■■■□ 3.25
SNX5-206ENST00000469704 MMP10P09238 476 aa35.34■■■■□ 3.25
SNX5-206ENST00000469704 MCM10Q7L590 875 aa35.34■■■■□ 3.25
SNX5-206ENST00000469704 FMNL2Q96PY5 1086 aa35.34■■■■□ 3.25
SNX5-206ENST00000469704 HEG1Q9ULI3 1381 aa35.34■■■■□ 3.25
SNX5-206ENST00000469704 C4AP0C0L4 1744 aa35.33■■■■□ 3.25
SNX5-206ENST00000469704 YY1P25490 414 aa35.32■■■■□ 3.24
SNX5-206ENST00000469704 SOS1Q07889 1333 aaPredicted RBP35.32■■■■□ 3.24
SNX5-206ENST00000469704 USP42Q9H9J4 1324 aaKnown RBP35.31■■■■□ 3.24
SNX5-206ENST00000469704 DCTN1Q14203 1278 aa35.29■■■■□ 3.24
SNX5-206ENST00000469704 ZBTB1Q9Y2K1 713 aa35.29■■■■□ 3.24
SNX5-206ENST00000469704 TAF7Q15545 349 aaPredicted RBP35.28■■■■□ 3.24
SNX5-206ENST00000469704 NFE2L2Q16236 605 aa35.28■■■■□ 3.24
SNX5-206ENST00000469704 MAPK8IP3Q9UPT6 1336 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms