RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 KDRP35968 1356 aa11.16□□□□□ -0.62
GAPVD1-213ENST00000469498 ITGB4P16144 1822 aa11.15□□□□□ -0.62
GAPVD1-213ENST00000469498 SENP3-EIF4A1A0A087X0R7 540 aa11.15□□□□□ -0.62
GAPVD1-213ENST00000469498 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
GAPVD1-213ENST00000469498 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
GAPVD1-213ENST00000469498 DOT1LQ8TEK3 1739 aa11.15□□□□□ -0.63
GAPVD1-213ENST00000469498 PYGBP11216 843 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 PRKAR2BP31323 418 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 UNC5CLQ8IV45 518 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 USP35Q9P2H5 1018 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 USP21Q9UK80 565 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 TOGARAM1Q9Y4F4 1720 aa11.14□□□□□ -0.63
GAPVD1-213ENST00000469498 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
GAPVD1-213ENST00000469498 ATRNO75882 1429 aa11.13□□□□□ -0.63
GAPVD1-213ENST00000469498 FNBP4Q8N3X1 1017 aaPredicted RBP11.13□□□□□ -0.63
GAPVD1-213ENST00000469498 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 SBF2Q86WG5 1849 aa11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 PLCG2P16885 1265 aa11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 YTHDC1Q96MU7 727 aaKnown RBP11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 CARD10Q9BWT7 1032 aa11.12□□□□□ -0.63
GAPVD1-213ENST00000469498 SPATA31A1Q5TZJ5 1347 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 FCHSD2O94868 740 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
GAPVD1-213ENST00000469498 VPS72Q15906 364 aa11.1□□□□□ -0.63
GAPVD1-213ENST00000469498 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
GAPVD1-213ENST00000469498 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
GAPVD1-213ENST00000469498 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 NEFMP07197 916 aa11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 TCP11L2Q8N4U5 519 aa11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-213ENST00000469498 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
GAPVD1-213ENST00000469498 APAF1O14727 1248 aa11.08□□□□□ -0.64
GAPVD1-213ENST00000469498 IL2RBP14784 551 aa11.08□□□□□ -0.64
GAPVD1-213ENST00000469498 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
GAPVD1-213ENST00000469498 TRPC5Q9UL62 973 aaPredicted RBP11.08□□□□□ -0.64
GAPVD1-213ENST00000469498 NEUROD2Q15784 382 aa11.07□□□□□ -0.64
GAPVD1-213ENST00000469498 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-213ENST00000469498 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 A0A0G2JS52 829 aa11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 MYT1Q01538 1121 aa11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 FAM98CQ17RN3 349 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 ZNF772Q68DY9 489 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 ZNF530Q6P9A1 599 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 PAPPAQ13219 1627 aa11.06□□□□□ -0.64
GAPVD1-213ENST00000469498 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 NHSQ6T4R5 1651 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 BTAF1O14981 1849 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 QTRT2Q9H974 415 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
GAPVD1-213ENST00000469498 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
GAPVD1-213ENST00000469498 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
GAPVD1-213ENST00000469498 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
GAPVD1-213ENST00000469498 RGS12O14924 1447 aa11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 RIPK4P57078 832 aa11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 ZCRB1Q8TBF4 217 aaKnown RBP11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 RGS17Q9UGC6 210 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 MRC1P22897 1456 aa11.03□□□□□ -0.64
GAPVD1-213ENST00000469498 C5P01031 1676 aa11.02□□□□□ -0.64
GAPVD1-213ENST00000469498 DDB1Q16531 1140 aa11.02□□□□□ -0.65
GAPVD1-213ENST00000469498 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.65
GAPVD1-213ENST00000469498 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
GAPVD1-213ENST00000469498 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 CYP27B1O15528 508 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 PHKG2P15735 406 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 RBM6P78332 1123 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 DCTN1Q14203 1278 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 POTEAQ6S8J7 498 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 ZBED9Q6R2W3 1325 aa11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-213ENST00000469498 EXOC5O00471 708 aa11□□□□□ -0.65
GAPVD1-213ENST00000469498 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms