RNA–Protein interactions for RNA: ENST00000469190.1

PLXNB3-205, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 626 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-205ENST00000469190 SCN11AQ9UI33 1791 aa18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 A0A0G2JS52 829 aa18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 BCAR3O75815 825 aa18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 MYT1Q01538 1121 aa18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
PLXNB3-205ENST00000469190 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
PLXNB3-205ENST00000469190 KRT24Q2M2I5 525 aa18.36■□□□□ 0.53
PLXNB3-205ENST00000469190 ZNF428Q96B54 188 aa18.36■□□□□ 0.53
PLXNB3-205ENST00000469190 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
PLXNB3-205ENST00000469190 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
PLXNB3-205ENST00000469190 TRPC5Q9UL62 973 aaPredicted RBP18.36■□□□□ 0.53
PLXNB3-205ENST00000469190 PLIN1O60240 522 aa18.35■□□□□ 0.53
PLXNB3-205ENST00000469190 VAMP4O75379 141 aa18.35■□□□□ 0.53
PLXNB3-205ENST00000469190 NFATC2IPQ8NCF5 419 aa18.35■□□□□ 0.53
PLXNB3-205ENST00000469190 ERVV-2B6SEH9 535 aa18.34■□□□□ 0.53
PLXNB3-205ENST00000469190 MRC1P22897 1456 aa18.33■□□□□ 0.53
PLXNB3-205ENST00000469190 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
PLXNB3-205ENST00000469190 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.52
PLXNB3-205ENST00000469190 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.52
PLXNB3-205ENST00000469190 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
PLXNB3-205ENST00000469190 ATRNO75882 1429 aa18.32■□□□□ 0.52
PLXNB3-205ENST00000469190 KCNQ3O43525 872 aa18.32■□□□□ 0.52
PLXNB3-205ENST00000469190 EIF4A1P60842 406 aaKnown RBP18.32■□□□□ 0.52
PLXNB3-205ENST00000469190 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
PLXNB3-205ENST00000469190 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
PLXNB3-205ENST00000469190 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
PLXNB3-205ENST00000469190 QTRT2Q9H974 415 aaKnown RBP18.31■□□□□ 0.52
PLXNB3-205ENST00000469190 TCERG1O14776 1098 aaKnown RBP18.3■□□□□ 0.52
PLXNB3-205ENST00000469190 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
PLXNB3-205ENST00000469190 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
PLXNB3-205ENST00000469190 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
PLXNB3-205ENST00000469190 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
PLXNB3-205ENST00000469190 KIF16BQ96L93 1317 aa18.28■□□□□ 0.52
PLXNB3-205ENST00000469190 MARCH10Q8NA82 808 aaPredicted RBP18.28■□□□□ 0.52
PLXNB3-205ENST00000469190 GLI3P10071 1580 aa18.28■□□□□ 0.52
PLXNB3-205ENST00000469190 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.52
PLXNB3-205ENST00000469190 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.52
PLXNB3-205ENST00000469190 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
PLXNB3-205ENST00000469190 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
PLXNB3-205ENST00000469190 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 HOXB7P09629 217 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 NOB1Q9ULX3 412 aaKnown RBP18.26■□□□□ 0.51
PLXNB3-205ENST00000469190 EIF2S2P20042 333 aaKnown RBP18.25■□□□□ 0.51
PLXNB3-205ENST00000469190 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
PLXNB3-205ENST00000469190 THSD7AQ9UPZ6 1657 aa18.25■□□□□ 0.51
PLXNB3-205ENST00000469190 MS4A1P11836 297 aa18.24■□□□□ 0.51
PLXNB3-205ENST00000469190 C20orf194Q5TEA3 1177 aa18.24■□□□□ 0.51
PLXNB3-205ENST00000469190 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
PLXNB3-205ENST00000469190 ACSBG1Q96GR2 724 aa18.24■□□□□ 0.51
PLXNB3-205ENST00000469190 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 BRPF1P55201 1214 aaPredicted RBP18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 SEPT12Q8IYM1 358 aa18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 PIGBQ92521 554 aa18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 CRBNQ96SW2 442 aa18.23■□□□□ 0.51
PLXNB3-205ENST00000469190 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
PLXNB3-205ENST00000469190 PDE3AQ14432 1141 aa18.22■□□□□ 0.51
PLXNB3-205ENST00000469190 ATF7IPQ6VMQ6 1270 aa18.22■□□□□ 0.51
PLXNB3-205ENST00000469190 CLUAP1Q96AJ1 413 aa18.22■□□□□ 0.51
PLXNB3-205ENST00000469190 DOT1LQ8TEK3 1739 aa18.22■□□□□ 0.51
PLXNB3-205ENST00000469190 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
PLXNB3-205ENST00000469190 ONECUT3O60422 494 aaPredicted RBP18.21■□□□□ 0.51
PLXNB3-205ENST00000469190 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
PLXNB3-205ENST00000469190 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
PLXNB3-205ENST00000469190 BCL9O00512 1426 aa18.21■□□□□ 0.51
PLXNB3-205ENST00000469190 KAT6BQ8WYB5 2073 aa18.21■□□□□ 0.51
PLXNB3-205ENST00000469190 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 TRIM27P14373 513 aa18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 ITGB4P16144 1822 aa18.2■□□□□ 0.5
PLXNB3-205ENST00000469190 RBM6P78332 1123 aaKnown RBP18.19■□□□□ 0.5
PLXNB3-205ENST00000469190 ARHGAP45Q92619 1136 aa18.19■□□□□ 0.5
PLXNB3-205ENST00000469190 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
PLXNB3-205ENST00000469190 ASAP1Q9ULH1 1129 aa18.19■□□□□ 0.5
PLXNB3-205ENST00000469190 PAPPAQ13219 1627 aa18.19■□□□□ 0.5
PLXNB3-205ENST00000469190 ATG3Q9NT62 314 aa18.18■□□□□ 0.5
PLXNB3-205ENST00000469190 CHPF2Q9P2E5 772 aa18.18■□□□□ 0.5
PLXNB3-205ENST00000469190 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
PLXNB3-205ENST00000469190 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
PLXNB3-205ENST00000469190 COG6Q9Y2V7 657 aa18.17■□□□□ 0.5
PLXNB3-205ENST00000469190 KCPQ6ZWJ8 1503 aa18.17■□□□□ 0.5
PLXNB3-205ENST00000469190 PTPRCP08575 1304 aa18.17■□□□□ 0.5
PLXNB3-205ENST00000469190 RLBP1P12271 317 aa18.16■□□□□ 0.5
PLXNB3-205ENST00000469190 G2E3Q7L622 706 aa18.16■□□□□ 0.5
PLXNB3-205ENST00000469190 PPP4R2Q9NY27 417 aa18.16■□□□□ 0.5
PLXNB3-205ENST00000469190 UBR2Q8IWV8 1755 aa18.15■□□□□ 0.5
PLXNB3-205ENST00000469190 FLIIQ13045 1269 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms