RNA–Protein interactions for RNA: ENST00000469187.5

TRIM6-206, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 1,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-206ENST00000469187 PARP4Q9UKK3 1724 aaKnown RBP13.86□□□□□ -0.19
TRIM6-206ENST00000469187 TNS2Q63HR2 1409 aa13.85□□□□□ -0.19
TRIM6-206ENST00000469187 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
TRIM6-206ENST00000469187 FAM182BQ5T319 152 aa13.85□□□□□ -0.19
TRIM6-206ENST00000469187 ELL2O00472 640 aaPredicted RBP13.84□□□□□ -0.19
TRIM6-206ENST00000469187 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
TRIM6-206ENST00000469187 PIGBQ92521 554 aa13.84□□□□□ -0.19
TRIM6-206ENST00000469187 CHMP4AQ9BY43 222 aa13.84□□□□□ -0.19
TRIM6-206ENST00000469187 FANCIQ9NVI1 1328 aa13.84□□□□□ -0.19
TRIM6-206ENST00000469187 GLI3P10071 1580 aa13.83□□□□□ -0.19
TRIM6-206ENST00000469187 ZNF790Q6PG37 636 aa13.83□□□□□ -0.2
TRIM6-206ENST00000469187 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
TRIM6-206ENST00000469187 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
TRIM6-206ENST00000469187 DLG5Q8TDM6 1919 aa13.82□□□□□ -0.2
TRIM6-206ENST00000469187 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
TRIM6-206ENST00000469187 KCNQ3O43525 872 aa13.81□□□□□ -0.2
TRIM6-206ENST00000469187 KCNQ2O43526 872 aa13.81□□□□□ -0.2
TRIM6-206ENST00000469187 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
TRIM6-206ENST00000469187 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
TRIM6-206ENST00000469187 SMARCC1Q92922 1105 aaPredicted RBP13.81□□□□□ -0.2
TRIM6-206ENST00000469187 FMNL2Q96PY5 1086 aa13.81□□□□□ -0.2
TRIM6-206ENST00000469187 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
TRIM6-206ENST00000469187 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
TRIM6-206ENST00000469187 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
TRIM6-206ENST00000469187 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
TRIM6-206ENST00000469187 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
TRIM6-206ENST00000469187 VAMP4O75379 141 aa13.79□□□□□ -0.2
TRIM6-206ENST00000469187 BCL11BQ9C0K0 894 aaPredicted RBP13.79□□□□□ -0.2
TRIM6-206ENST00000469187 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
TRIM6-206ENST00000469187 RCAN3Q9UKA8 241 aa13.79□□□□□ -0.2
TRIM6-206ENST00000469187 TRIM37O94972 964 aa13.78□□□□□ -0.2
TRIM6-206ENST00000469187 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
TRIM6-206ENST00000469187 EIF2S2P20042 333 aaKnown RBP13.78□□□□□ -0.2
TRIM6-206ENST00000469187 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
TRIM6-206ENST00000469187 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
TRIM6-206ENST00000469187 TEX13AQ9BXU3 409 aaPredicted RBP13.78□□□□□ -0.2
TRIM6-206ENST00000469187 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.21
TRIM6-206ENST00000469187 KRT24Q2M2I5 525 aa13.77□□□□□ -0.21
TRIM6-206ENST00000469187 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.21
TRIM6-206ENST00000469187 BCL9O00512 1426 aa13.76□□□□□ -0.21
TRIM6-206ENST00000469187 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
TRIM6-206ENST00000469187 HOXB7P09629 217 aa13.76□□□□□ -0.21
TRIM6-206ENST00000469187 CCDC30Q5VVM6 783 aa13.76□□□□□ -0.21
TRIM6-206ENST00000469187 STK31Q9BXU1 1019 aa13.76□□□□□ -0.21
TRIM6-206ENST00000469187 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
TRIM6-206ENST00000469187 HMGB2P26583 209 aaKnown RBP13.75□□□□□ -0.21
TRIM6-206ENST00000469187 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
TRIM6-206ENST00000469187 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
TRIM6-206ENST00000469187 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
TRIM6-206ENST00000469187 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 STARD3NLO95772 234 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
TRIM6-206ENST00000469187 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
TRIM6-206ENST00000469187 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 HDGFL1Q5TGJ6 251 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 SUPT16HQ9Y5B9 1047 aaKnown RBP13.74□□□□□ -0.21
TRIM6-206ENST00000469187 USP16Q9Y5T5 823 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 WNK3Q9BYP7 1800 aa13.74□□□□□ -0.21
TRIM6-206ENST00000469187 TCERG1O14776 1098 aaKnown RBP13.73□□□□□ -0.21
TRIM6-206ENST00000469187 APBA3O96018 575 aa13.73□□□□□ -0.21
TRIM6-206ENST00000469187 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
TRIM6-206ENST00000469187 PTF1AQ7RTS3 328 aa13.73□□□□□ -0.21
TRIM6-206ENST00000469187 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.73□□□□□ -0.21
TRIM6-206ENST00000469187 SMC4Q9NTJ3 1288 aa13.73□□□□□ -0.21
TRIM6-206ENST00000469187 RGS12O14924 1447 aa13.73□□□□□ -0.21
TRIM6-206ENST00000469187 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
TRIM6-206ENST00000469187 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
TRIM6-206ENST00000469187 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
TRIM6-206ENST00000469187 SIK1P57059 783 aa13.72□□□□□ -0.21
TRIM6-206ENST00000469187 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
TRIM6-206ENST00000469187 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.21
TRIM6-206ENST00000469187 SHANK3Q9BYB0 1731 aa13.71□□□□□ -0.21
TRIM6-206ENST00000469187 BCAR3O75815 825 aa13.71□□□□□ -0.21
TRIM6-206ENST00000469187 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
TRIM6-206ENST00000469187 FRAT1Q92837 279 aaPredicted RBP13.71□□□□□ -0.21
TRIM6-206ENST00000469187 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
TRIM6-206ENST00000469187 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
TRIM6-206ENST00000469187 ADAMTS7Q9UKP4 1686 aa13.7□□□□□ -0.22
TRIM6-206ENST00000469187 MRC1P22897 1456 aa13.7□□□□□ -0.22
TRIM6-206ENST00000469187 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
TRIM6-206ENST00000469187 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
TRIM6-206ENST00000469187 BCL2L13Q9BXK5 485 aa13.7□□□□□ -0.22
TRIM6-206ENST00000469187 CCNL1Q9UK58 526 aaPredicted RBP13.7□□□□□ -0.22
TRIM6-206ENST00000469187 MRPL50Q8N5N7 158 aaKnown RBP13.69□□□□□ -0.22
TRIM6-206ENST00000469187 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
TRIM6-206ENST00000469187 PLSCR1O15162 318 aa13.68□□□□□ -0.22
TRIM6-206ENST00000469187 A1BGP04217 495 aa13.68□□□□□ -0.22
TRIM6-206ENST00000469187 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
TRIM6-206ENST00000469187 ARXQ96QS3 562 aa13.68□□□□□ -0.22
TRIM6-206ENST00000469187 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRIM6-206ENST00000469187 NOB1Q9ULX3 412 aaKnown RBP13.68□□□□□ -0.22
TRIM6-206ENST00000469187 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
TRIM6-206ENST00000469187 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
TRIM6-206ENST00000469187 MS4A1P11836 297 aa13.67□□□□□ -0.22
TRIM6-206ENST00000469187 MYL6BP14649 208 aa13.67□□□□□ -0.22
TRIM6-206ENST00000469187 BRPF1P55201 1214 aaPredicted RBP13.67□□□□□ -0.22
TRIM6-206ENST00000469187 SLC27A3Q5K4L6 730 aa13.67□□□□□ -0.22
TRIM6-206ENST00000469187 SLC4A9Q96Q91 983 aa13.67□□□□□ -0.22
TRIM6-206ENST00000469187 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms