RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PTPRMP28827 1452 aa12.09□□□□□ -0.47
NUP50-214ENST00000469163 PDCL2Q8N4E4 241 aa12.09□□□□□ -0.47
NUP50-214ENST00000469163 CLSTN1O94985 981 aa12.09□□□□□ -0.47
NUP50-214ENST00000469163 MYL6BP14649 208 aa12.09□□□□□ -0.47
NUP50-214ENST00000469163 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
NUP50-214ENST00000469163 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.47
NUP50-214ENST00000469163 NBPF4Q96M43 638 aa12.08□□□□□ -0.47
NUP50-214ENST00000469163 GOLIM4O00461 696 aa12.08□□□□□ -0.48
NUP50-214ENST00000469163 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP50-214ENST00000469163 MTHFSDQ2M296 383 aaKnown RBP12.08□□□□□ -0.48
NUP50-214ENST00000469163 NLRP1Q9C000 1473 aa12.08□□□□□ -0.48
NUP50-214ENST00000469163 F6X3S4 739 aa12.08□□□□□ -0.48
NUP50-214ENST00000469163 TSPYL1Q9H0U9 437 aa12.08□□□□□ -0.48
NUP50-214ENST00000469163 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
NUP50-214ENST00000469163 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
NUP50-214ENST00000469163 MYOM2P54296 1465 aa12.07□□□□□ -0.48
NUP50-214ENST00000469163 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
NUP50-214ENST00000469163 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
NUP50-214ENST00000469163 NOB1Q9ULX3 412 aaKnown RBP12.07□□□□□ -0.48
NUP50-214ENST00000469163 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
NUP50-214ENST00000469163 HOXC9P31274 260 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
NUP50-214ENST00000469163 ACSBG1Q96GR2 724 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
NUP50-214ENST00000469163 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 LGR6Q9HBX8 967 aa12.06□□□□□ -0.48
NUP50-214ENST00000469163 FCHSD2O94868 740 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 CT47A1Q5JQC4 288 aaPredicted RBP12.05□□□□□ -0.48
NUP50-214ENST00000469163 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
NUP50-214ENST00000469163 BTG4Q9NY30 223 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 IFT172Q9UG01 1749 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 CHMP3Q9Y3E7 222 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 DDX11L8A8MPP1 907 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 IRF6O14896 467 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 ZNF500O60304 480 aaPredicted RBP12.05□□□□□ -0.48
NUP50-214ENST00000469163 NFE2L2Q16236 605 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 SSH1Q8WYL5 1049 aa12.05□□□□□ -0.48
NUP50-214ENST00000469163 STK31Q9BXU1 1019 aa12.04□□□□□ -0.48
NUP50-214ENST00000469163 FER1L4A9Z1Z3 1794 aa12.04□□□□□ -0.48
NUP50-214ENST00000469163 C8orf58Q8NAV2 365 aa12.04□□□□□ -0.48
NUP50-214ENST00000469163 RSPH14Q9UHP6 348 aa12.04□□□□□ -0.48
NUP50-214ENST00000469163 C3P01024 1663 aa12.04□□□□□ -0.48
NUP50-214ENST00000469163 CCDC85AQ96PX6 553 aaPredicted RBP12.04□□□□□ -0.48
NUP50-214ENST00000469163 PPP1R9BQ96SB3 815 aa12.04□□□□□ -0.48
NUP50-214ENST00000469163 NOL7Q9UMY1 257 aaKnown RBP12.04□□□□□ -0.48
NUP50-214ENST00000469163 SPATA31D1Q6ZQQ2 1576 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 IL13P35225 146 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 KCNQ4P56696 695 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 MYRIPQ8NFW9 859 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 SBNO2Q9Y2G9 1366 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
NUP50-214ENST00000469163 TMEM131LA2VDJ0 1609 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 TULP4Q9NRJ4 1543 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 NPHP1O15259 732 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 BRINP3Q76B58 766 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
NUP50-214ENST00000469163 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.48
NUP50-214ENST00000469163 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.48
NUP50-214ENST00000469163 ZFYVE9O95405 1425 aa12.02□□□□□ -0.48
NUP50-214ENST00000469163 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.48
NUP50-214ENST00000469163 KCNQ3O43525 872 aa12.02□□□□□ -0.49
NUP50-214ENST00000469163 TTC5Q8N0Z6 440 aa12.01□□□□□ -0.49
NUP50-214ENST00000469163 SH3BP1Q9Y3L3 701 aa12.01□□□□□ -0.49
NUP50-214ENST00000469163 PPLO60437 1756 aa12.01□□□□□ -0.49
NUP50-214ENST00000469163 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
NUP50-214ENST00000469163 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
NUP50-214ENST00000469163 BTBD11A6QL63 1104 aa12□□□□□ -0.49
NUP50-214ENST00000469163 KCNH5Q8NCM2 988 aa12□□□□□ -0.49
NUP50-214ENST00000469163 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
NUP50-214ENST00000469163 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
NUP50-214ENST00000469163 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
NUP50-214ENST00000469163 ZKSCAN5Q9Y2L8 839 aa12□□□□□ -0.49
NUP50-214ENST00000469163 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
NUP50-214ENST00000469163 RLBP1P12271 317 aa12□□□□□ -0.49
NUP50-214ENST00000469163 GNAI1P63096 354 aa12□□□□□ -0.49
NUP50-214ENST00000469163 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
NUP50-214ENST00000469163 RNF217Q8TC41 542 aa12□□□□□ -0.49
NUP50-214ENST00000469163 CHMP5Q9NZZ3 219 aa12□□□□□ -0.49
NUP50-214ENST00000469163 FEZ2Q9UHY8 353 aaPredicted RBP12□□□□□ -0.49
NUP50-214ENST00000469163 RBM25P49756 843 aaKnown RBP11.99□□□□□ -0.49
NUP50-214ENST00000469163 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
NUP50-214ENST00000469163 PSMD1Q99460 953 aa11.99□□□□□ -0.49
NUP50-214ENST00000469163 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
NUP50-214ENST00000469163 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
NUP50-214ENST00000469163 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
NUP50-214ENST00000469163 CCDC172P0C7W6 258 aa11.99□□□□□ -0.49
NUP50-214ENST00000469163 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
NUP50-214ENST00000469163 PRAMEF22A3QJZ6 481 aa11.98□□□□□ -0.49
NUP50-214ENST00000469163 TULP2O00295 520 aa11.98□□□□□ -0.49
NUP50-214ENST00000469163 HMGN5P82970 282 aaKnown RBP11.98□□□□□ -0.49
NUP50-214ENST00000469163 GABPB1Q06547 395 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms