RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 KCNQ3O43525 872 aa26.3■■□□□ 1.8
SPIN1-203ENST00000469017 CABP4P57796 275 aa26.3■■□□□ 1.8
SPIN1-203ENST00000469017 IFT57Q9NWB7 429 aa26.3■■□□□ 1.8
SPIN1-203ENST00000469017 IL16Q14005 1332 aa26.3■■□□□ 1.8
SPIN1-203ENST00000469017 CALD1Q05682 793 aaKnown RBP26.3■■□□□ 1.8
SPIN1-203ENST00000469017 TAF7Q15545 349 aaPredicted RBP26.3■■□□□ 1.8
SPIN1-203ENST00000469017 TRMT2AQ8IZ69 625 aaKnown RBP26.3■■□□□ 1.8
SPIN1-203ENST00000469017 DOT1LQ8TEK3 1739 aa26.3■■□□□ 1.8
SPIN1-203ENST00000469017 GNAI1P63096 354 aa26.29■■□□□ 1.8
SPIN1-203ENST00000469017 SLC39A6Q13433 755 aa26.29■■□□□ 1.8
SPIN1-203ENST00000469017 KRT24Q2M2I5 525 aa26.29■■□□□ 1.8
SPIN1-203ENST00000469017 TSPYL4Q9UJ04 414 aa26.29■■□□□ 1.8
SPIN1-203ENST00000469017 SIPA1L3O60292 1781 aaPredicted RBP26.29■■□□□ 1.8
SPIN1-203ENST00000469017 RGS12O14924 1447 aa26.29■■□□□ 1.8
SPIN1-203ENST00000469017 CHL1O00533 1208 aa26.29■■□□□ 1.8
SPIN1-203ENST00000469017 BTBD11A6QL63 1104 aa26.28■■□□□ 1.8
SPIN1-203ENST00000469017 KCNQ2O43526 872 aa26.27■■□□□ 1.8
SPIN1-203ENST00000469017 PRIM1P49642 420 aaKnown RBP26.27■■□□□ 1.8
SPIN1-203ENST00000469017 ITGB4P16144 1822 aa26.27■■□□□ 1.8
SPIN1-203ENST00000469017 PTF1AQ7RTS3 328 aa26.27■■□□□ 1.8
SPIN1-203ENST00000469017 MYH16Q9H6N6 1097 aa26.27■■□□□ 1.8
SPIN1-203ENST00000469017 KRT27Q7Z3Y8 459 aa26.26■■□□□ 1.79
SPIN1-203ENST00000469017 ERVV-2B6SEH9 535 aa26.25■■□□□ 1.79
SPIN1-203ENST00000469017 ELL2O00472 640 aaPredicted RBP26.25■■□□□ 1.79
SPIN1-203ENST00000469017 EXOSC9Q06265 439 aaKnown RBP26.25■■□□□ 1.79
SPIN1-203ENST00000469017 MRC1P22897 1456 aa26.25■■□□□ 1.79
SPIN1-203ENST00000469017 PIGBQ92521 554 aa26.24■■□□□ 1.79
SPIN1-203ENST00000469017 TMOD3Q9NYL9 352 aa26.24■■□□□ 1.79
SPIN1-203ENST00000469017 TSPYL6Q8N831 410 aa26.23■■□□□ 1.79
SPIN1-203ENST00000469017 CENPBP07199 599 aaPredicted RBP26.21■■□□□ 1.79
SPIN1-203ENST00000469017 C8orf58Q8NAV2 365 aa26.21■■□□□ 1.79
SPIN1-203ENST00000469017 KDM3BQ7LBC6 1761 aa26.21■■□□□ 1.79
SPIN1-203ENST00000469017 ASAP1Q9ULH1 1129 aa26.2■■□□□ 1.78
SPIN1-203ENST00000469017 ZNF790Q6PG37 636 aa26.19■■□□□ 1.78
SPIN1-203ENST00000469017 BCL9O00512 1426 aa26.18■■□□□ 1.78
SPIN1-203ENST00000469017 PRAMEF22A3QJZ6 481 aa26.16■■□□□ 1.78
SPIN1-203ENST00000469017 SBF2Q86WG5 1849 aa26.16■■□□□ 1.78
SPIN1-203ENST00000469017 PTCD1O75127 700 aaKnown RBP26.16■■□□□ 1.78
SPIN1-203ENST00000469017 EIF4A1P60842 406 aaKnown RBP26.16■■□□□ 1.78
SPIN1-203ENST00000469017 ATG3Q9NT62 314 aa26.15■■□□□ 1.78
SPIN1-203ENST00000469017 TCERG1O14776 1098 aaKnown RBP26.15■■□□□ 1.78
SPIN1-203ENST00000469017 ZNF496Q96IT1 587 aaPredicted RBP26.15■■□□□ 1.78
SPIN1-203ENST00000469017 TTC5Q8N0Z6 440 aa26.14■■□□□ 1.77
SPIN1-203ENST00000469017 BABAM1Q9NWV8 329 aa26.13■■□□□ 1.77
SPIN1-203ENST00000469017 TWISTNBQ3B726 338 aaPredicted RBP26.13■■□□□ 1.77
SPIN1-203ENST00000469017 NECTIN2Q92692 538 aa26.13■■□□□ 1.77
SPIN1-203ENST00000469017 BCL2L13Q9BXK5 485 aa26.12■■□□□ 1.77
SPIN1-203ENST00000469017 PAPPAQ13219 1627 aa26.12■■□□□ 1.77
SPIN1-203ENST00000469017 TRIM37O94972 964 aa26.11■■□□□ 1.77
SPIN1-203ENST00000469017 FAM196AQ6ZSG2 479 aa26.11■■□□□ 1.77
SPIN1-203ENST00000469017 VAMP4O75379 141 aa26.1■■□□□ 1.77
SPIN1-203ENST00000469017 NHSQ6T4R5 1651 aa26.1■■□□□ 1.77
SPIN1-203ENST00000469017 BTAF1O14981 1849 aa26.09■■□□□ 1.77
SPIN1-203ENST00000469017 RBM42Q9BTD8 480 aaKnown RBP26.09■■□□□ 1.77
SPIN1-203ENST00000469017 KCPQ6ZWJ8 1503 aa26.09■■□□□ 1.77
SPIN1-203ENST00000469017 RCAN3Q9UKA8 241 aa26.08■■□□□ 1.77
SPIN1-203ENST00000469017 UBR2Q8IWV8 1755 aa26.08■■□□□ 1.76
SPIN1-203ENST00000469017 C5P01031 1676 aa26.07■■□□□ 1.76
SPIN1-203ENST00000469017 GIGYF1O75420 1035 aaPredicted RBP26.07■■□□□ 1.76
SPIN1-203ENST00000469017 BCAR3O75815 825 aa26.07■■□□□ 1.76
SPIN1-203ENST00000469017 EIF2S2P20042 333 aaKnown RBP26.07■■□□□ 1.76
SPIN1-203ENST00000469017 KCNQ4P56696 695 aa26.06■■□□□ 1.76
SPIN1-203ENST00000469017 FMNL2Q96PY5 1086 aa26.06■■□□□ 1.76
SPIN1-203ENST00000469017 SLC4A9Q96Q91 983 aa26.06■■□□□ 1.76
SPIN1-203ENST00000469017 HEG1Q9ULI3 1381 aa26.05■■□□□ 1.76
SPIN1-203ENST00000469017 SUPT16HQ9Y5B9 1047 aaKnown RBP26.04■■□□□ 1.76
SPIN1-203ENST00000469017 RARSP54136 660 aaKnown RBP26.03■■□□□ 1.76
SPIN1-203ENST00000469017 BCL11BQ9C0K0 894 aaPredicted RBP26.03■■□□□ 1.76
SPIN1-203ENST00000469017 USP16Q9Y5T5 823 aa26.03■■□□□ 1.76
SPIN1-203ENST00000469017 PALLDQ8WX93 1383 aa26.03■■□□□ 1.76
SPIN1-203ENST00000469017 SSH1Q8WYL5 1049 aa26.03■■□□□ 1.76
SPIN1-203ENST00000469017 PIP4K2AP48426 406 aaPredicted RBP26.02■■□□□ 1.76
SPIN1-203ENST00000469017 SNRPA1P09661 255 aaKnown RBP26■■□□□ 1.75
SPIN1-203ENST00000469017 ANXA1P04083 346 aa26■■□□□ 1.75
SPIN1-203ENST00000469017 HDGFL1Q5TGJ6 251 aa26■■□□□ 1.75
SPIN1-203ENST00000469017 PLIN1O60240 522 aa25.99■■□□□ 1.75
SPIN1-203ENST00000469017 DNAJC10Q8IXB1 793 aa25.99■■□□□ 1.75
SPIN1-203ENST00000469017 SMC4Q9NTJ3 1288 aa25.99■■□□□ 1.75
SPIN1-203ENST00000469017 LOC102724428A0A0B4J2F2 783 aa25.98■■□□□ 1.75
SPIN1-203ENST00000469017 SIK1P57059 783 aa25.98■■□□□ 1.75
SPIN1-203ENST00000469017 CT47B1P0C2W7 299 aaPredicted RBP25.97■■□□□ 1.75
SPIN1-203ENST00000469017 ATP6V1AP38606 617 aa25.97■■□□□ 1.75
SPIN1-203ENST00000469017 CHPF2Q9P2E5 772 aa25.96■■□□□ 1.75
SPIN1-203ENST00000469017 ITPK1Q13572 414 aa25.95■■□□□ 1.75
SPIN1-203ENST00000469017 PROSER3Q2NL68 480 aa25.95■■□□□ 1.75
SPIN1-203ENST00000469017 SMARCC1Q92922 1105 aaPredicted RBP25.95■■□□□ 1.75
SPIN1-203ENST00000469017 FRAT1Q92837 279 aaPredicted RBP25.94■■□□□ 1.74
SPIN1-203ENST00000469017 TJP1Q07157 1748 aa25.94■■□□□ 1.74
SPIN1-203ENST00000469017 APBA3O96018 575 aa25.94■■□□□ 1.74
SPIN1-203ENST00000469017 A1BGP04217 495 aa25.94■■□□□ 1.74
SPIN1-203ENST00000469017 SLC4A2P04920 1241 aa25.94■■□□□ 1.74
SPIN1-203ENST00000469017 HOXB7P09629 217 aa25.93■■□□□ 1.74
SPIN1-203ENST00000469017 CCDC30Q5VVM6 783 aa25.93■■□□□ 1.74
SPIN1-203ENST00000469017 G2E3Q7L622 706 aa25.93■■□□□ 1.74
SPIN1-203ENST00000469017 MRPL50Q8N5N7 158 aaKnown RBP25.93■■□□□ 1.74
SPIN1-203ENST00000469017 TNNQ9UQP3 1299 aa25.92■■□□□ 1.74
SPIN1-203ENST00000469017 MYL6BP14649 208 aa25.92■■□□□ 1.74
SPIN1-203ENST00000469017 LAMB4A4D0S4 1761 aa25.91■■□□□ 1.74
SPIN1-203ENST00000469017 IRX6P78412 446 aaPredicted RBP25.91■■□□□ 1.74
SPIN1-203ENST00000469017 ALDH1L2Q3SY69 923 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms