RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 ITPK1Q13572 414 aa16.95■□□□□ 0.3
ABCF1-204ENST00000468958 DCAF5Q96JK2 942 aa16.95■□□□□ 0.3
ABCF1-204ENST00000468958 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
ABCF1-204ENST00000468958 TFCP2L1Q9NZI6 479 aa16.95■□□□□ 0.3
ABCF1-204ENST00000468958 MRC1P22897 1456 aa16.94■□□□□ 0.3
ABCF1-204ENST00000468958 PPP2R1AP30153 589 aa16.94■□□□□ 0.3
ABCF1-204ENST00000468958 COL23A1Q86Y22 540 aaPredicted RBP16.94■□□□□ 0.3
ABCF1-204ENST00000468958 LINC00116Q8NCU8 138 aa16.94■□□□□ 0.3
ABCF1-204ENST00000468958 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
ABCF1-204ENST00000468958 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
ABCF1-204ENST00000468958 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
ABCF1-204ENST00000468958 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
ABCF1-204ENST00000468958 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
ABCF1-204ENST00000468958 SIK1P57059 783 aa16.93■□□□□ 0.3
ABCF1-204ENST00000468958 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
ABCF1-204ENST00000468958 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
ABCF1-204ENST00000468958 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
ABCF1-204ENST00000468958 LGR6Q9HBX8 967 aa16.92■□□□□ 0.3
ABCF1-204ENST00000468958 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
ABCF1-204ENST00000468958 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
ABCF1-204ENST00000468958 DLG5Q8TDM6 1919 aa16.91■□□□□ 0.3
ABCF1-204ENST00000468958 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
ABCF1-204ENST00000468958 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
ABCF1-204ENST00000468958 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
ABCF1-204ENST00000468958 ATP6V1AP38606 617 aa16.89■□□□□ 0.29
ABCF1-204ENST00000468958 CABP4P57796 275 aa16.89■□□□□ 0.29
ABCF1-204ENST00000468958 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
ABCF1-204ENST00000468958 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
ABCF1-204ENST00000468958 KCPQ6ZWJ8 1503 aa16.88■□□□□ 0.29
ABCF1-204ENST00000468958 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
ABCF1-204ENST00000468958 MSL1Q68DK7 614 aa16.87■□□□□ 0.29
ABCF1-204ENST00000468958 ARXQ96QS3 562 aa16.87■□□□□ 0.29
ABCF1-204ENST00000468958 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
ABCF1-204ENST00000468958 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
ABCF1-204ENST00000468958 AK7Q96M32 723 aa16.86■□□□□ 0.29
ABCF1-204ENST00000468958 SYT17Q9BSW7 474 aa16.86■□□□□ 0.29
ABCF1-204ENST00000468958 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
ABCF1-204ENST00000468958 MSH5O43196 834 aa16.85■□□□□ 0.29
ABCF1-204ENST00000468958 PHF14O94880 888 aa16.85■□□□□ 0.29
ABCF1-204ENST00000468958 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
ABCF1-204ENST00000468958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
ABCF1-204ENST00000468958 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
ABCF1-204ENST00000468958 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
ABCF1-204ENST00000468958 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
ABCF1-204ENST00000468958 GNPATO15228 680 aa16.83■□□□□ 0.28
ABCF1-204ENST00000468958 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.28
ABCF1-204ENST00000468958 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
ABCF1-204ENST00000468958 IL17REQ8NFR9 667 aa16.83■□□□□ 0.28
ABCF1-204ENST00000468958 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
ABCF1-204ENST00000468958 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
ABCF1-204ENST00000468958 UTRNP46939 3433 aa16.82■□□□□ 0.28
ABCF1-204ENST00000468958 SSFA2P28290 1259 aa16.81■□□□□ 0.28
ABCF1-204ENST00000468958 KIF13BQ9NQT8 1826 aa16.81■□□□□ 0.28
ABCF1-204ENST00000468958 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
ABCF1-204ENST00000468958 FLAD1Q8NFF5 587 aa16.8■□□□□ 0.28
ABCF1-204ENST00000468958 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
ABCF1-204ENST00000468958 CEMIPQ8WUJ3 1361 aa16.79■□□□□ 0.28
ABCF1-204ENST00000468958 CHD4Q14839 1912 aa16.79■□□□□ 0.28
ABCF1-204ENST00000468958 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
ABCF1-204ENST00000468958 POLD1P28340 1107 aa16.79■□□□□ 0.28
ABCF1-204ENST00000468958 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
ABCF1-204ENST00000468958 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
ABCF1-204ENST00000468958 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
ABCF1-204ENST00000468958 RALBP1Q15311 655 aa16.78■□□□□ 0.28
ABCF1-204ENST00000468958 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
ABCF1-204ENST00000468958 DNAJC10Q8IXB1 793 aa16.78■□□□□ 0.28
ABCF1-204ENST00000468958 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
ABCF1-204ENST00000468958 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
ABCF1-204ENST00000468958 N4BP2Q86UW6 1770 aaPredicted RBP16.77■□□□□ 0.28
ABCF1-204ENST00000468958 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
ABCF1-204ENST00000468958 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
ABCF1-204ENST00000468958 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
ABCF1-204ENST00000468958 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
ABCF1-204ENST00000468958 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
ABCF1-204ENST00000468958 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
ABCF1-204ENST00000468958 FCHSD2O94868 740 aa16.75■□□□□ 0.27
ABCF1-204ENST00000468958 HMGB2P26583 209 aaKnown RBP16.75■□□□□ 0.27
ABCF1-204ENST00000468958 RTCBQ9Y3I0 505 aaKnown RBP16.75■□□□□ 0.27
ABCF1-204ENST00000468958 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
ABCF1-204ENST00000468958 GOLGB1Q14789 3259 aaKnown RBP16.74■□□□□ 0.27
ABCF1-204ENST00000468958 KCNQ3O43525 872 aa16.74■□□□□ 0.27
ABCF1-204ENST00000468958 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
ABCF1-204ENST00000468958 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
ABCF1-204ENST00000468958 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
ABCF1-204ENST00000468958 ZBTB22O15209 634 aa16.73■□□□□ 0.27
ABCF1-204ENST00000468958 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
ABCF1-204ENST00000468958 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
ABCF1-204ENST00000468958 MCM10Q7L590 875 aa16.73■□□□□ 0.27
ABCF1-204ENST00000468958 GYS1P13807 737 aa16.72■□□□□ 0.27
ABCF1-204ENST00000468958 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
ABCF1-204ENST00000468958 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
ABCF1-204ENST00000468958 TEFQ10587 303 aa16.71■□□□□ 0.27
ABCF1-204ENST00000468958 ZNF790Q6PG37 636 aa16.71■□□□□ 0.27
ABCF1-204ENST00000468958 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
ABCF1-204ENST00000468958 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
ABCF1-204ENST00000468958 LAMB4A4D0S4 1761 aa16.71■□□□□ 0.27
ABCF1-204ENST00000468958 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
ABCF1-204ENST00000468958 BCORQ6W2J9 1755 aa16.7■□□□□ 0.26
ABCF1-204ENST00000468958 HEG1Q9ULI3 1381 aa16.7■□□□□ 0.26
ABCF1-204ENST00000468958 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms