RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TFCP2L1Q9NZI6 479 aa19.44■□□□□ 0.7
COL27A1-203ENST00000468565 PNPLA7Q6ZV29 1317 aa19.44■□□□□ 0.7
COL27A1-203ENST00000468565 UBR3Q6ZT12 1888 aa19.43■□□□□ 0.7
COL27A1-203ENST00000468565 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
COL27A1-203ENST00000468565 PPP1R1BQ9UD71 204 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-203ENST00000468565 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
COL27A1-203ENST00000468565 PPP2R1AP30153 589 aa19.43■□□□□ 0.7
COL27A1-203ENST00000468565 PTGER2P43116 358 aa19.42■□□□□ 0.7
COL27A1-203ENST00000468565 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
COL27A1-203ENST00000468565 SLC16A10Q8TF71 515 aa19.42■□□□□ 0.7
COL27A1-203ENST00000468565 ATG3Q9NT62 314 aa19.41■□□□□ 0.7
COL27A1-203ENST00000468565 ASAP1Q9ULH1 1129 aa19.41■□□□□ 0.7
COL27A1-203ENST00000468565 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-203ENST00000468565 LOC102724428A0A0B4J2F2 783 aa19.41■□□□□ 0.7
COL27A1-203ENST00000468565 SIK1P57059 783 aa19.41■□□□□ 0.7
COL27A1-203ENST00000468565 CABP4P57796 275 aa19.41■□□□□ 0.7
COL27A1-203ENST00000468565 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
COL27A1-203ENST00000468565 COL5A3P25940 1745 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-203ENST00000468565 SGIP1Q9BQI5 828 aa19.39■□□□□ 0.7
COL27A1-203ENST00000468565 MRC1P22897 1456 aa19.39■□□□□ 0.69
COL27A1-203ENST00000468565 CICQ96RK0 1608 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-203ENST00000468565 MTHFSDQ2M296 383 aaKnown RBP19.37■□□□□ 0.69
COL27A1-203ENST00000468565 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
COL27A1-203ENST00000468565 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
COL27A1-203ENST00000468565 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
COL27A1-203ENST00000468565 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-203ENST00000468565 NFATC2IPQ8NCF5 419 aa19.35■□□□□ 0.69
COL27A1-203ENST00000468565 AK7Q96M32 723 aa19.35■□□□□ 0.69
COL27A1-203ENST00000468565 ITPK1Q13572 414 aa19.35■□□□□ 0.69
COL27A1-203ENST00000468565 LINC00116Q8NCU8 138 aa19.35■□□□□ 0.69
COL27A1-203ENST00000468565 RNMTO43148 476 aaKnown RBP19.34■□□□□ 0.69
COL27A1-203ENST00000468565 SIPA1L3O60292 1781 aaPredicted RBP19.34■□□□□ 0.69
COL27A1-203ENST00000468565 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.69
COL27A1-203ENST00000468565 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.69
COL27A1-203ENST00000468565 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.69
COL27A1-203ENST00000468565 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.69
COL27A1-203ENST00000468565 TJP1Q07157 1748 aa19.33■□□□□ 0.69
COL27A1-203ENST00000468565 LGR6Q9HBX8 967 aa19.33■□□□□ 0.68
COL27A1-203ENST00000468565 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
COL27A1-203ENST00000468565 SLC4A9Q96Q91 983 aa19.32■□□□□ 0.68
COL27A1-203ENST00000468565 ARXQ96QS3 562 aa19.32■□□□□ 0.68
COL27A1-203ENST00000468565 UBR2Q8IWV8 1755 aa19.32■□□□□ 0.68
COL27A1-203ENST00000468565 MAP3K5Q99683 1374 aa19.32■□□□□ 0.68
COL27A1-203ENST00000468565 POLD1P28340 1107 aa19.31■□□□□ 0.68
COL27A1-203ENST00000468565 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
COL27A1-203ENST00000468565 SSFA2P28290 1259 aa19.31■□□□□ 0.68
COL27A1-203ENST00000468565 PRKAR2BP31323 418 aa19.31■□□□□ 0.68
COL27A1-203ENST00000468565 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
COL27A1-203ENST00000468565 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL27A1-203ENST00000468565 DDX10Q13206 875 aaKnown RBP19.3■□□□□ 0.68
COL27A1-203ENST00000468565 GNAT3A8MTJ3 354 aa19.29■□□□□ 0.68
COL27A1-203ENST00000468565 FCHSD2O94868 740 aa19.29■□□□□ 0.68
COL27A1-203ENST00000468565 RALBP1Q15311 655 aa19.29■□□□□ 0.68
COL27A1-203ENST00000468565 AMIGO3Q86WK7 504 aa19.29■□□□□ 0.68
COL27A1-203ENST00000468565 FHDC1Q9C0D6 1143 aaPredicted RBP19.29■□□□□ 0.68
COL27A1-203ENST00000468565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.28■□□□□ 0.68
COL27A1-203ENST00000468565 RC3H1Q5TC82 1133 aaKnown RBP19.28■□□□□ 0.68
COL27A1-203ENST00000468565 CNTNAP4Q9C0A0 1308 aa19.28■□□□□ 0.68
COL27A1-203ENST00000468565 GNPATO15228 680 aa19.27■□□□□ 0.68
COL27A1-203ENST00000468565 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.68
COL27A1-203ENST00000468565 SYT17Q9BSW7 474 aa19.27■□□□□ 0.68
COL27A1-203ENST00000468565 KCPQ6ZWJ8 1503 aa19.27■□□□□ 0.68
COL27A1-203ENST00000468565 PTCD1O75127 700 aaKnown RBP19.27■□□□□ 0.67
COL27A1-203ENST00000468565 PHF14O94880 888 aa19.27■□□□□ 0.67
COL27A1-203ENST00000468565 DLG5Q8TDM6 1919 aa19.26■□□□□ 0.67
COL27A1-203ENST00000468565 C4AP0C0L4 1744 aa19.26■□□□□ 0.67
COL27A1-203ENST00000468565 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
COL27A1-203ENST00000468565 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
COL27A1-203ENST00000468565 RTCBQ9Y3I0 505 aaKnown RBP19.24■□□□□ 0.67
COL27A1-203ENST00000468565 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
COL27A1-203ENST00000468565 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
COL27A1-203ENST00000468565 TEFQ10587 303 aa19.23■□□□□ 0.67
COL27A1-203ENST00000468565 SMIM5Q71RC9 77 aa19.23■□□□□ 0.67
COL27A1-203ENST00000468565 RPS6KA4O75676 772 aa19.22■□□□□ 0.67
COL27A1-203ENST00000468565 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
COL27A1-203ENST00000468565 TRAPPC3LQ5T215 181 aa19.21■□□□□ 0.67
COL27A1-203ENST00000468565 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
COL27A1-203ENST00000468565 MYBBP1AQ9BQG0 1328 aaKnown RBP19.21■□□□□ 0.67
COL27A1-203ENST00000468565 CRKLP46109 303 aaKnown RBP19.21■□□□□ 0.67
COL27A1-203ENST00000468565 VSIG10Q8N0Z9 540 aa19.21■□□□□ 0.67
COL27A1-203ENST00000468565 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
COL27A1-203ENST00000468565 HTATSF1O43719 755 aaKnown RBP19.19■□□□□ 0.66
COL27A1-203ENST00000468565 TTC5Q8N0Z6 440 aa19.19■□□□□ 0.66
COL27A1-203ENST00000468565 NEFMP07197 916 aa19.19■□□□□ 0.66
COL27A1-203ENST00000468565 DNAJC10Q8IXB1 793 aa19.19■□□□□ 0.66
COL27A1-203ENST00000468565 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
COL27A1-203ENST00000468565 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
COL27A1-203ENST00000468565 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
COL27A1-203ENST00000468565 INTS5Q6P9B9 1019 aaKnown RBP19.17■□□□□ 0.66
COL27A1-203ENST00000468565 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
COL27A1-203ENST00000468565 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
COL27A1-203ENST00000468565 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
COL27A1-203ENST00000468565 CYP19A1P11511 503 aaPredicted RBP19.17■□□□□ 0.66
COL27A1-203ENST00000468565 CHD4Q14839 1912 aa19.17■□□□□ 0.66
COL27A1-203ENST00000468565 RFC4P35249 363 aa19.16■□□□□ 0.66
COL27A1-203ENST00000468565 CCDC87Q9NVE4 849 aa19.16■□□□□ 0.66
COL27A1-203ENST00000468565 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
COL27A1-203ENST00000468565 HEG1Q9ULI3 1381 aa19.16■□□□□ 0.66
COL27A1-203ENST00000468565 CD2APQ9Y5K6 639 aa19.15■□□□□ 0.66
COL27A1-203ENST00000468565 BTBD11A6QL63 1104 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms