RNA–Protein interactions for RNA: ENST00000468209.5

NSMCE4A-206, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 1,041 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-206ENST00000468209 A0A0G2JLW4 131 aa12.72□□□□□ -0.37
NSMCE4A-206ENST00000468209 HOXC9P31274 260 aa12.72□□□□□ -0.37
NSMCE4A-206ENST00000468209 FSTL1Q12841 308 aa12.72□□□□□ -0.37
NSMCE4A-206ENST00000468209 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
NSMCE4A-206ENST00000468209 MMP10P09238 476 aa12.71□□□□□ -0.37
NSMCE4A-206ENST00000468209 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
NSMCE4A-206ENST00000468209 MPRIPQ6WCQ1 1025 aa12.71□□□□□ -0.37
NSMCE4A-206ENST00000468209 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
NSMCE4A-206ENST00000468209 SBF1O95248 1867 aa12.71□□□□□ -0.37
NSMCE4A-206ENST00000468209 A0A1W2PP64 1363 aa12.7□□□□□ -0.38
NSMCE4A-206ENST00000468209 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
NSMCE4A-206ENST00000468209 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
NSMCE4A-206ENST00000468209 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
NSMCE4A-206ENST00000468209 NSD3Q9BZ95 1437 aa12.7□□□□□ -0.38
NSMCE4A-206ENST00000468209 SSFA2P28290 1259 aa12.69□□□□□ -0.38
NSMCE4A-206ENST00000468209 TMC1Q8TDI8 760 aa12.69□□□□□ -0.38
NSMCE4A-206ENST00000468209 SLC12A5Q9H2X9 1139 aa12.69□□□□□ -0.38
NSMCE4A-206ENST00000468209 RRAGCQ9HB90 399 aa12.69□□□□□ -0.38
NSMCE4A-206ENST00000468209 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
NSMCE4A-206ENST00000468209 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
NSMCE4A-206ENST00000468209 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
NSMCE4A-206ENST00000468209 FCHSD2O94868 740 aa12.68□□□□□ -0.38
NSMCE4A-206ENST00000468209 DPEP1P16444 411 aa12.68□□□□□ -0.38
NSMCE4A-206ENST00000468209 GNPATO15228 680 aa12.67□□□□□ -0.38
NSMCE4A-206ENST00000468209 AMPHP49418 695 aa12.67□□□□□ -0.38
NSMCE4A-206ENST00000468209 HDGFL2Q7Z4V5 671 aaPredicted RBP12.67□□□□□ -0.38
NSMCE4A-206ENST00000468209 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 CYP27B1O15528 508 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 TGFB2P61812 414 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 ITPK1Q13572 414 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 PIGBQ92521 554 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
NSMCE4A-206ENST00000468209 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 KCNA3P22001 575 aa12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 SIK1P57059 783 aa12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 SMC1BQ8NDV3 1235 aa12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 RAPGEF4Q8WZA2 1011 aa12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
NSMCE4A-206ENST00000468209 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
NSMCE4A-206ENST00000468209 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
NSMCE4A-206ENST00000468209 RRS1Q15050 365 aaKnown RBP12.64□□□□□ -0.39
NSMCE4A-206ENST00000468209 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
NSMCE4A-206ENST00000468209 NBR1Q14596 966 aa12.63□□□□□ -0.39
NSMCE4A-206ENST00000468209 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
NSMCE4A-206ENST00000468209 HMGB2P26583 209 aaKnown RBP12.62□□□□□ -0.39
NSMCE4A-206ENST00000468209 COG3Q96JB2 828 aa12.62□□□□□ -0.39
NSMCE4A-206ENST00000468209 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
NSMCE4A-206ENST00000468209 COL5A3P25940 1745 aaPredicted RBP12.62□□□□□ -0.39
NSMCE4A-206ENST00000468209 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
NSMCE4A-206ENST00000468209 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
NSMCE4A-206ENST00000468209 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
NSMCE4A-206ENST00000468209 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
NSMCE4A-206ENST00000468209 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
NSMCE4A-206ENST00000468209 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 TMF1P82094 1093 aa12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 CCDC87Q9NVE4 849 aa12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 SMG6Q86US8 1419 aaKnown RBP12.6□□□□□ -0.39
NSMCE4A-206ENST00000468209 GYS1P13807 737 aa12.59□□□□□ -0.39
NSMCE4A-206ENST00000468209 RASSF7Q02833 373 aa12.59□□□□□ -0.39
NSMCE4A-206ENST00000468209 KDRP35968 1356 aa12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 FOXN1O15353 648 aa12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 CHRNA5P30532 468 aa12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 HSP90AB2PQ58FF8 381 aa12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 ARHGEF1Q92888 912 aaKnown RBP12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
NSMCE4A-206ENST00000468209 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 IFNLR1Q8IU57 520 aaPredicted RBP12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 PARP3Q9Y6F1 533 aa12.57□□□□□ -0.4
NSMCE4A-206ENST00000468209 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 ZNF831Q5JPB2 1677 aa12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 INSRP06213 1382 aa12.56□□□□□ -0.4
NSMCE4A-206ENST00000468209 SIN3AQ96ST3 1273 aa12.55□□□□□ -0.4
NSMCE4A-206ENST00000468209 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
NSMCE4A-206ENST00000468209 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
NSMCE4A-206ENST00000468209 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
NSMCE4A-206ENST00000468209 DDR1Q08345 913 aa12.54□□□□□ -0.4
NSMCE4A-206ENST00000468209 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
NSMCE4A-206ENST00000468209 FLT4P35916 1363 aa12.54□□□□□ -0.4
NSMCE4A-206ENST00000468209 DLEC1Q9Y238 1755 aa12.53□□□□□ -0.4
NSMCE4A-206ENST00000468209 GLTPD2A6NH11 291 aa12.53□□□□□ -0.4
NSMCE4A-206ENST00000468209 POTECB2RU33 542 aa12.53□□□□□ -0.4
NSMCE4A-206ENST00000468209 RFC4P35249 363 aa12.53□□□□□ -0.4
NSMCE4A-206ENST00000468209 SRP68Q9UHB9 627 aaKnown RBP12.53□□□□□ -0.4
NSMCE4A-206ENST00000468209 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
NSMCE4A-206ENST00000468209 ADAMTS7Q9UKP4 1686 aa12.52□□□□□ -0.4
NSMCE4A-206ENST00000468209 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms