RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 PPP2R1AP30153 589 aa19.6■□□□□ 0.73
COMMD3-206ENST00000468179 ASAP1Q9ULH1 1129 aa19.6■□□□□ 0.73
COMMD3-206ENST00000468179 PNPLA7Q6ZV29 1317 aa19.59■□□□□ 0.73
COMMD3-206ENST00000468179 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
COMMD3-206ENST00000468179 ATG3Q9NT62 314 aa19.59■□□□□ 0.73
COMMD3-206ENST00000468179 TOGARAM1Q9Y4F4 1720 aa19.59■□□□□ 0.73
COMMD3-206ENST00000468179 POLD1P28340 1107 aa19.58■□□□□ 0.73
COMMD3-206ENST00000468179 PTGER2P43116 358 aa19.58■□□□□ 0.73
COMMD3-206ENST00000468179 AK7Q96M32 723 aa19.58■□□□□ 0.73
COMMD3-206ENST00000468179 ITGB4P16144 1822 aa19.58■□□□□ 0.72
COMMD3-206ENST00000468179 ATP6V1AP38606 617 aa19.57■□□□□ 0.72
COMMD3-206ENST00000468179 COL3A1P02461 1466 aaPredicted RBP19.56■□□□□ 0.72
COMMD3-206ENST00000468179 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
COMMD3-206ENST00000468179 GAS2L2Q8NHY3 880 aa19.55■□□□□ 0.72
COMMD3-206ENST00000468179 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
COMMD3-206ENST00000468179 SRCAPQ6ZRS2 3230 aa19.55■□□□□ 0.72
COMMD3-206ENST00000468179 MTHFSDQ2M296 383 aaKnown RBP19.54■□□□□ 0.72
COMMD3-206ENST00000468179 ARXQ96QS3 562 aa19.54■□□□□ 0.72
COMMD3-206ENST00000468179 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
COMMD3-206ENST00000468179 COL23A1Q86Y22 540 aaPredicted RBP19.53■□□□□ 0.72
COMMD3-206ENST00000468179 SGIP1Q9BQI5 828 aa19.53■□□□□ 0.72
COMMD3-206ENST00000468179 QSER1Q2KHR3 1735 aa19.53■□□□□ 0.72
COMMD3-206ENST00000468179 RNMTO43148 476 aaKnown RBP19.52■□□□□ 0.72
COMMD3-206ENST00000468179 U2AF1L5P0DN76 240 aaPredicted RBP19.52■□□□□ 0.72
COMMD3-206ENST00000468179 U2AF1Q01081 240 aaKnown RBP eCLIP19.52■□□□□ 0.72
COMMD3-206ENST00000468179 SLC52A2Q9HAB3 445 aa19.52■□□□□ 0.72
COMMD3-206ENST00000468179 FCHSD2O94868 740 aa19.51■□□□□ 0.71
COMMD3-206ENST00000468179 SSFA2P28290 1259 aa19.51■□□□□ 0.71
COMMD3-206ENST00000468179 LINC00116Q8NCU8 138 aa19.51■□□□□ 0.71
COMMD3-206ENST00000468179 C5P01031 1676 aa19.51■□□□□ 0.71
COMMD3-206ENST00000468179 ITPK1Q13572 414 aa19.51■□□□□ 0.71
COMMD3-206ENST00000468179 RALBP1Q15311 655 aa19.51■□□□□ 0.71
COMMD3-206ENST00000468179 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
COMMD3-206ENST00000468179 CAPN15O75808 1086 aa19.5■□□□□ 0.71
COMMD3-206ENST00000468179 NEFMP07197 916 aa19.5■□□□□ 0.71
COMMD3-206ENST00000468179 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
COMMD3-206ENST00000468179 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
COMMD3-206ENST00000468179 RC3H1Q5TC82 1133 aaKnown RBP19.5■□□□□ 0.71
COMMD3-206ENST00000468179 LGR6Q9HBX8 967 aa19.5■□□□□ 0.71
COMMD3-206ENST00000468179 GNPATO15228 680 aa19.49■□□□□ 0.71
COMMD3-206ENST00000468179 PTCD1O75127 700 aaKnown RBP19.49■□□□□ 0.71
COMMD3-206ENST00000468179 FHDC1Q9C0D6 1143 aaPredicted RBP19.49■□□□□ 0.71
COMMD3-206ENST00000468179 RSPH6AQ9H0K4 717 aa19.49■□□□□ 0.71
COMMD3-206ENST00000468179 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
COMMD3-206ENST00000468179 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
COMMD3-206ENST00000468179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.48■□□□□ 0.71
COMMD3-206ENST00000468179 PHF14O94880 888 aa19.48■□□□□ 0.71
COMMD3-206ENST00000468179 SYT17Q9BSW7 474 aa19.48■□□□□ 0.71
COMMD3-206ENST00000468179 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
COMMD3-206ENST00000468179 TEFQ10587 303 aa19.47■□□□□ 0.71
COMMD3-206ENST00000468179 PNNQ9H307 717 aaKnown RBP19.47■□□□□ 0.71
COMMD3-206ENST00000468179 TAF1LQ8IZX4 1826 aa19.46■□□□□ 0.71
COMMD3-206ENST00000468179 CNTNAP4Q9C0A0 1308 aa19.45■□□□□ 0.7
COMMD3-206ENST00000468179 TRAPPC3LQ5T215 181 aa19.45■□□□□ 0.7
COMMD3-206ENST00000468179 SLC4A9Q96Q91 983 aa19.45■□□□□ 0.7
COMMD3-206ENST00000468179 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
COMMD3-206ENST00000468179 ZNF831Q5JPB2 1677 aa19.44■□□□□ 0.7
COMMD3-206ENST00000468179 TTC5Q8N0Z6 440 aa19.44■□□□□ 0.7
COMMD3-206ENST00000468179 RTF1Q92541 710 aaKnown RBP19.44■□□□□ 0.7
COMMD3-206ENST00000468179 PHACTR3Q96KR7 559 aa19.44■□□□□ 0.7
COMMD3-206ENST00000468179 MRC1P22897 1456 aa19.43■□□□□ 0.7
COMMD3-206ENST00000468179 SCN11AQ9UI33 1791 aa19.43■□□□□ 0.7
COMMD3-206ENST00000468179 RPS6KA4O75676 772 aa19.43■□□□□ 0.7
COMMD3-206ENST00000468179 MSL1Q68DK7 614 aa19.43■□□□□ 0.7
COMMD3-206ENST00000468179 TUBGCP6Q96RT7 1819 aa19.42■□□□□ 0.7
COMMD3-206ENST00000468179 VSIG10Q8N0Z9 540 aa19.42■□□□□ 0.7
COMMD3-206ENST00000468179 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
COMMD3-206ENST00000468179 IL17REQ8NFR9 667 aa19.42■□□□□ 0.7
COMMD3-206ENST00000468179 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
COMMD3-206ENST00000468179 RFC4P35249 363 aa19.4■□□□□ 0.7
COMMD3-206ENST00000468179 CRKLP46109 303 aaKnown RBP19.4■□□□□ 0.7
COMMD3-206ENST00000468179 SLC39A6Q13433 755 aa19.4■□□□□ 0.7
COMMD3-206ENST00000468179 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
COMMD3-206ENST00000468179 NLGN1Q8N2Q7 840 aa19.39■□□□□ 0.69
COMMD3-206ENST00000468179 MYBBP1AQ9BQG0 1328 aaKnown RBP19.39■□□□□ 0.69
COMMD3-206ENST00000468179 COL24A1Q17RW2 1714 aa19.38■□□□□ 0.69
COMMD3-206ENST00000468179 ADAMTS7Q9UKP4 1686 aa19.38■□□□□ 0.69
COMMD3-206ENST00000468179 ARHGEF1Q92888 912 aaKnown RBP19.38■□□□□ 0.69
COMMD3-206ENST00000468179 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
COMMD3-206ENST00000468179 CEMIPQ8WUJ3 1361 aa19.37■□□□□ 0.69
COMMD3-206ENST00000468179 ZNF790Q6PG37 636 aa19.37■□□□□ 0.69
COMMD3-206ENST00000468179 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
COMMD3-206ENST00000468179 CCDC87Q9NVE4 849 aa19.37■□□□□ 0.69
COMMD3-206ENST00000468179 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
COMMD3-206ENST00000468179 UBR3Q6ZT12 1888 aa19.37■□□□□ 0.69
COMMD3-206ENST00000468179 STARD3NLO95772 234 aa19.36■□□□□ 0.69
COMMD3-206ENST00000468179 DNAJC10Q8IXB1 793 aa19.36■□□□□ 0.69
COMMD3-206ENST00000468179 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
COMMD3-206ENST00000468179 BTBD11A6QL63 1104 aa19.35■□□□□ 0.69
COMMD3-206ENST00000468179 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
COMMD3-206ENST00000468179 INTS5Q6P9B9 1019 aaKnown RBP19.34■□□□□ 0.69
COMMD3-206ENST00000468179 FMNL2Q96PY5 1086 aa19.34■□□□□ 0.69
COMMD3-206ENST00000468179 GPR162Q16538 588 aa19.33■□□□□ 0.69
COMMD3-206ENST00000468179 COL5A3P25940 1745 aaPredicted RBP19.32■□□□□ 0.68
COMMD3-206ENST00000468179 MCM10Q7L590 875 aa19.32■□□□□ 0.68
COMMD3-206ENST00000468179 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
COMMD3-206ENST00000468179 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
COMMD3-206ENST00000468179 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
COMMD3-206ENST00000468179 KCPQ6ZWJ8 1503 aa19.32■□□□□ 0.68
COMMD3-206ENST00000468179 ZPR1O75312 459 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms