RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CYP27B1O15528 508 aa7.84□□□□□ -1.15
USP39-213ENST00000467885 IL2RBP14784 551 aa7.84□□□□□ -1.15
USP39-213ENST00000467885 TATP17735 454 aaPredicted RBP7.84□□□□□ -1.15
USP39-213ENST00000467885 MEX3CQ5U5Q3 659 aaKnown RBP7.84□□□□□ -1.15
USP39-213ENST00000467885 WDR63Q8IWG1 891 aa7.84□□□□□ -1.15
USP39-213ENST00000467885 CDAN1Q8IWY9 1227 aa7.84□□□□□ -1.15
USP39-213ENST00000467885 ZCRB1Q8TBF4 217 aaKnown RBP7.84□□□□□ -1.15
USP39-213ENST00000467885 RAPGEF4Q8WZA2 1011 aa7.84□□□□□ -1.15
USP39-213ENST00000467885 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
USP39-213ENST00000467885 LRP6O75581 1613 aa7.84□□□□□ -1.15
USP39-213ENST00000467885 CRYBG1Q9Y4K1 1723 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 AFF2P51816 1311 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 GNAT3A8MTJ3 354 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 EXOC5O00471 708 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 PLCG2P16885 1265 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 IRX5P78411 483 aaPredicted RBP7.83□□□□□ -1.16
USP39-213ENST00000467885 SLFN5Q08AF3 891 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 DCTN1Q14203 1278 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 NKX1-1Q15270 411 aaPredicted RBP7.83□□□□□ -1.16
USP39-213ENST00000467885 GAS2L2Q8NHY3 880 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 CRB1P82279 1406 aa7.83□□□□□ -1.16
USP39-213ENST00000467885 PHRF1Q9P1Y6 1649 aaKnown RBP7.82□□□□□ -1.16
USP39-213ENST00000467885 ST18O60284 1047 aa7.82□□□□□ -1.16
USP39-213ENST00000467885 NEFMP07197 916 aa7.82□□□□□ -1.16
USP39-213ENST00000467885 ZNF853P0CG23 659 aa7.82□□□□□ -1.16
USP39-213ENST00000467885 PHKG2P15735 406 aa7.82□□□□□ -1.16
USP39-213ENST00000467885 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
USP39-213ENST00000467885 AKAP4Q5JQC9 854 aa7.82□□□□□ -1.16
USP39-213ENST00000467885 THUMPD2Q9BTF0 503 aaKnown RBP7.82□□□□□ -1.16
USP39-213ENST00000467885 CDCA7Q9BWT1 371 aaPredicted RBP7.82□□□□□ -1.16
USP39-213ENST00000467885 TRPC5Q9UL62 973 aaPredicted RBP7.82□□□□□ -1.16
USP39-213ENST00000467885 ZBED9Q6R2W3 1325 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 MAPK8IP3Q9UPT6 1336 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 CHL1O00533 1208 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 RNMTO43148 476 aaKnown RBP7.81□□□□□ -1.16
USP39-213ENST00000467885 GOLGA2Q08379 1002 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
USP39-213ENST00000467885 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
USP39-213ENST00000467885 MPRIPQ6WCQ1 1025 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 MCM10Q7L590 875 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 IFNL2Q8IZJ0 200 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
USP39-213ENST00000467885 CCDC9Q9Y3X0 531 aaKnown RBP7.81□□□□□ -1.16
USP39-213ENST00000467885 SHPRHQ149N8 1683 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 LMO7Q8WWI1 1683 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 ABCC6O95255 1503 aa7.81□□□□□ -1.16
USP39-213ENST00000467885 TAF7Q15545 349 aaPredicted RBP7.8□□□□□ -1.16
USP39-213ENST00000467885 DUSP27Q5VZP5 1158 aa7.8□□□□□ -1.16
USP39-213ENST00000467885 POTEAQ6S8J7 498 aa7.8□□□□□ -1.16
USP39-213ENST00000467885 MIS18AQ9NYP9 233 aa7.8□□□□□ -1.16
USP39-213ENST00000467885 IL16Q14005 1332 aa7.79□□□□□ -1.16
USP39-213ENST00000467885 RGPD1P0DJD0 1748 aa7.79□□□□□ -1.16
USP39-213ENST00000467885 FKBP8Q14318 412 aa7.79□□□□□ -1.16
USP39-213ENST00000467885 ZNF772Q68DY9 489 aaPredicted RBP7.79□□□□□ -1.16
USP39-213ENST00000467885 MARCH10Q8NA82 808 aaPredicted RBP7.79□□□□□ -1.16
USP39-213ENST00000467885 NFATC2IPQ8NCF5 419 aa7.79□□□□□ -1.16
USP39-213ENST00000467885 RTF1Q92541 710 aaKnown RBP7.79□□□□□ -1.16
USP39-213ENST00000467885 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
USP39-213ENST00000467885 CFAP44Q96MT7 982 aa7.79□□□□□ -1.16
USP39-213ENST00000467885 COL14A1Q05707 1796 aaKnown RBP7.79□□□□□ -1.16
USP39-213ENST00000467885 DISP2A7MBM2 1401 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 ERVV-2B6SEH9 535 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 E9PSI1 815 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 PYGBP11216 843 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 RBM6P78332 1123 aaKnown RBP7.78□□□□□ -1.16
USP39-213ENST00000467885 LMOD3Q0VAK6 560 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 DDB1Q16531 1140 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 C1orf141Q5JVX7 400 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 DCAF8Q5TAQ9 597 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 PLEKHG2Q9H7P9 1386 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 LTN1O94822 1766 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 RGPD5Q99666 1765 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 MEGF6O75095 1541 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 OVOS2A0A0G2JMS6 1433 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 ATRNO75882 1429 aa7.78□□□□□ -1.16
USP39-213ENST00000467885 CEMIPQ8WUJ3 1361 aa7.77□□□□□ -1.17
USP39-213ENST00000467885 KCNQ3O43525 872 aa7.77□□□□□ -1.17
USP39-213ENST00000467885 HSP90AB1P08238 724 aaKnown RBP7.77□□□□□ -1.17
USP39-213ENST00000467885 OCEL1Q9H607 264 aa7.77□□□□□ -1.17
USP39-213ENST00000467885 IFT57Q9NWB7 429 aa7.77□□□□□ -1.17
USP39-213ENST00000467885 BABAM1Q9NWV8 329 aa7.77□□□□□ -1.17
USP39-213ENST00000467885 MAP3K5Q99683 1374 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 ABCA3Q99758 1704 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 RXRBP28702 533 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 PRIM1P49642 420 aaKnown RBP7.76□□□□□ -1.17
USP39-213ENST00000467885 GNAI1P63096 354 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 CALD1Q05682 793 aaKnown RBP7.76□□□□□ -1.17
USP39-213ENST00000467885 C8orf58Q8NAV2 365 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 SLC52A2Q9HAB3 445 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 MBIPQ9NS73 344 aa7.76□□□□□ -1.17
USP39-213ENST00000467885 LAS1LQ9Y4W2 734 aaKnown RBP7.76□□□□□ -1.17
USP39-213ENST00000467885 VAMP4O75379 141 aa7.75□□□□□ -1.17
USP39-213ENST00000467885 CABP4P57796 275 aa7.75□□□□□ -1.17
USP39-213ENST00000467885 EXOSC9Q06265 439 aaKnown RBP7.75□□□□□ -1.17
USP39-213ENST00000467885 FAM182BQ5T319 152 aa7.75□□□□□ -1.17
USP39-213ENST00000467885 TSPYL6Q8N831 410 aa7.75□□□□□ -1.17
USP39-213ENST00000467885 PIGBQ92521 554 aa7.75□□□□□ -1.17
USP39-213ENST00000467885 TSR2Q969E8 191 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms