RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 KLF16Q9BXK1 252 aaPredicted RBP8.91□□□□□ -0.98
GAPVD1-211ENST00000467707 FOXO3O43524 673 aa8.9□□□□□ -0.98
GAPVD1-211ENST00000467707 ZIC2O95409 532 aaPredicted RBP8.9□□□□□ -0.98
GAPVD1-211ENST00000467707 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
GAPVD1-211ENST00000467707 J3QL48 77 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 SMTNP53814 917 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 EPHA4P54764 986 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 CLN3Q13286 438 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 MTFR1Q15390 333 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 ITPKCQ96DU7 683 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 PRIMPOLQ96LW4 560 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 ARHGEF10LQ9HCE6 1279 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 EGFL7Q9UHF1 273 aa8.89□□□□□ -0.99
GAPVD1-211ENST00000467707 TNFRSF10AO00220 468 aa8.88□□□□□ -0.99
GAPVD1-211ENST00000467707 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
GAPVD1-211ENST00000467707 SCHIP1Q9P0W5 487 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-211ENST00000467707 A6NJY4 79 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 TIMP2P16035 220 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 SMPD1P17405 629 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 PTGIRP43119 386 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 TNS4Q8IZW8 715 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 CNKSR1Q969H4 720 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 SERTAD1Q9UHV2 236 aa8.87□□□□□ -0.99
GAPVD1-211ENST00000467707 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 CDK2AP1O14519 115 aa8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 FOXK2Q01167 660 aa8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 NLRP3Q96P20 1036 aa8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 CHMP3Q9Y3E7 222 aa8.86□□□□□ -0.99
GAPVD1-211ENST00000467707 IL2RAP01589 272 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 MFAP1P55081 439 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 CBLBQ13191 982 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 TLR1Q15399 786 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 TRIM67Q6ZTA4 783 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 RAB6BQ9NRW1 208 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 HRH3Q9Y5N1 445 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
GAPVD1-211ENST00000467707 GPC1P35052 558 aa8.84□□□□□ -0.99
GAPVD1-211ENST00000467707 FKBP5Q13451 457 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-211ENST00000467707 KDF1Q8NAX2 398 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-211ENST00000467707 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
GAPVD1-211ENST00000467707 TSPAN10Q9H1Z9 355 aaPredicted RBP8.84□□□□□ -0.99
GAPVD1-211ENST00000467707 ZFAND3Q9H8U3 227 aa8.84□□□□□ -0.99
GAPVD1-211ENST00000467707 SOWAHDA6NJG2 315 aa8.83□□□□□ -1
GAPVD1-211ENST00000467707 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
GAPVD1-211ENST00000467707 UPP2O95045 317 aa8.83□□□□□ -1
GAPVD1-211ENST00000467707 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
GAPVD1-211ENST00000467707 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
GAPVD1-211ENST00000467707 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
GAPVD1-211ENST00000467707 C21orf2O43822 256 aa8.82□□□□□ -1
GAPVD1-211ENST00000467707 SERPINB4P48594 390 aa8.82□□□□□ -1
GAPVD1-211ENST00000467707 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
GAPVD1-211ENST00000467707 MEN1O00255 615 aa8.81□□□□□ -1
GAPVD1-211ENST00000467707 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
GAPVD1-211ENST00000467707 RELBQ01201 579 aa8.81□□□□□ -1
GAPVD1-211ENST00000467707 CENPCQ03188 943 aa8.81□□□□□ -1
GAPVD1-211ENST00000467707 POTEAQ6S8J7 498 aa8.81□□□□□ -1
GAPVD1-211ENST00000467707 HPS1Q92902 700 aa8.81□□□□□ -1
GAPVD1-211ENST00000467707 C2orf49Q9BVC5 232 aaPredicted RBP8.81□□□□□ -1
GAPVD1-211ENST00000467707 FHDC1Q9C0D6 1143 aaPredicted RBP8.81□□□□□ -1
GAPVD1-211ENST00000467707 IQSEC3Q9UPP2 1182 aaPredicted RBP8.81□□□□□ -1
GAPVD1-211ENST00000467707 PDZRN3Q9UPQ7 1066 aa8.81□□□□□ -1
GAPVD1-211ENST00000467707 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
GAPVD1-211ENST00000467707 LGR5O75473 907 aa8.8□□□□□ -1
GAPVD1-211ENST00000467707 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
GAPVD1-211ENST00000467707 GTF3C2Q8WUA4 911 aaPredicted RBP8.8□□□□□ -1
GAPVD1-211ENST00000467707 AGBL1Q96MI9 1066 aa8.8□□□□□ -1
GAPVD1-211ENST00000467707 ICMTO60725 284 aa8.79□□□□□ -1
GAPVD1-211ENST00000467707 ABL1P00519 1130 aa8.79□□□□□ -1
GAPVD1-211ENST00000467707 ERCC3P19447 782 aa8.79□□□□□ -1
GAPVD1-211ENST00000467707 TEAD4Q15561 434 aa8.79□□□□□ -1
GAPVD1-211ENST00000467707 HELQQ8TDG4 1101 aa8.79□□□□□ -1
GAPVD1-211ENST00000467707 CHMP7Q8WUX9 453 aaPredicted RBP8.79□□□□□ -1
GAPVD1-211ENST00000467707 ZSCAN10Q96SZ4 725 aaPredicted RBP8.79□□□□□ -1
GAPVD1-211ENST00000467707 MKNK1Q9BUB5 465 aa8.79□□□□□ -1
GAPVD1-211ENST00000467707 SERTM1A2A2V5 107 aa8.78□□□□□ -1
GAPVD1-211ENST00000467707 SPINT1O43278 529 aa8.78□□□□□ -1
GAPVD1-211ENST00000467707 RNF144AP50876 292 aaPredicted RBP8.78□□□□□ -1
GAPVD1-211ENST00000467707 FKBP4Q02790 459 aaKnown RBP eCLIP8.78□□□□□ -1
GAPVD1-211ENST00000467707 GLYCTKQ8IVS8 523 aa8.78□□□□□ -1
GAPVD1-211ENST00000467707 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
GAPVD1-211ENST00000467707 RHBDD1Q8TEB9 315 aa8.78□□□□□ -1
GAPVD1-211ENST00000467707 NIFKQ9BYG3 293 aaKnown RBP8.78□□□□□ -1
GAPVD1-211ENST00000467707 SCNN1AP37088 669 aa8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 GNASQ5JWF2 1037 aa8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 C16orf46Q6P387 395 aa8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 PURBQ96QR8 312 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 ZNF395Q9H8N7 513 aaPredicted RBP8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 SEPT3Q9UH03 358 aa8.77□□□□□ -1.01
GAPVD1-211ENST00000467707 H3BRB1 525 aa8.76□□□□□ -1.01
GAPVD1-211ENST00000467707 AVPP01185 164 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms