RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
SSBP1-206ENST00000467681 ITGB4P16144 1822 aa18■□□□□ 0.47
SSBP1-206ENST00000467681 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
SSBP1-206ENST00000467681 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-206ENST00000467681 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SSBP1-206ENST00000467681 TEFQ10587 303 aa17.99■□□□□ 0.47
SSBP1-206ENST00000467681 MCM10Q7L590 875 aa17.99■□□□□ 0.47
SSBP1-206ENST00000467681 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
SSBP1-206ENST00000467681 CEMIPQ8WUJ3 1361 aa17.99■□□□□ 0.47
SSBP1-206ENST00000467681 RIPK4P57078 832 aa17.98■□□□□ 0.47
SSBP1-206ENST00000467681 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
SSBP1-206ENST00000467681 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
SSBP1-206ENST00000467681 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
SSBP1-206ENST00000467681 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
SSBP1-206ENST00000467681 SLC39A6Q13433 755 aa17.97■□□□□ 0.47
SSBP1-206ENST00000467681 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
SSBP1-206ENST00000467681 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
SSBP1-206ENST00000467681 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-206ENST00000467681 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
SSBP1-206ENST00000467681 PTCD1O75127 700 aaKnown RBP17.96■□□□□ 0.47
SSBP1-206ENST00000467681 ITPK1Q13572 414 aa17.95■□□□□ 0.46
SSBP1-206ENST00000467681 TAF7Q15545 349 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-206ENST00000467681 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SSBP1-206ENST00000467681 ZNF827Q17R98 1081 aa17.94■□□□□ 0.46
SSBP1-206ENST00000467681 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
SSBP1-206ENST00000467681 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
SSBP1-206ENST00000467681 RREB1Q92766 1687 aa17.93■□□□□ 0.46
SSBP1-206ENST00000467681 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
SSBP1-206ENST00000467681 APAF1O14727 1248 aa17.93■□□□□ 0.46
SSBP1-206ENST00000467681 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
SSBP1-206ENST00000467681 ZNF790Q6PG37 636 aa17.93■□□□□ 0.46
SSBP1-206ENST00000467681 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
SSBP1-206ENST00000467681 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
SSBP1-206ENST00000467681 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
SSBP1-206ENST00000467681 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
SSBP1-206ENST00000467681 MRC1P22897 1456 aa17.92■□□□□ 0.46
SSBP1-206ENST00000467681 ADAMTS7Q9UKP4 1686 aa17.92■□□□□ 0.46
SSBP1-206ENST00000467681 KCNQ3O43525 872 aa17.91■□□□□ 0.46
SSBP1-206ENST00000467681 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
SSBP1-206ENST00000467681 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
SSBP1-206ENST00000467681 LY75O60449 1722 aa17.91■□□□□ 0.46
SSBP1-206ENST00000467681 NUP188Q5SRE5 1749 aa17.91■□□□□ 0.46
SSBP1-206ENST00000467681 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
SSBP1-206ENST00000467681 RC3H1Q5TC82 1133 aaKnown RBP17.9■□□□□ 0.46
SSBP1-206ENST00000467681 VSIG10Q8N0Z9 540 aa17.9■□□□□ 0.46
SSBP1-206ENST00000467681 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-206ENST00000467681 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
SSBP1-206ENST00000467681 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-206ENST00000467681 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
SSBP1-206ENST00000467681 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
SSBP1-206ENST00000467681 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
SSBP1-206ENST00000467681 AK7Q96M32 723 aa17.87■□□□□ 0.45
SSBP1-206ENST00000467681 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
SSBP1-206ENST00000467681 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
SSBP1-206ENST00000467681 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-206ENST00000467681 TEX13AQ9BXU3 409 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-206ENST00000467681 PNPLA7Q6ZV29 1317 aa17.86■□□□□ 0.45
SSBP1-206ENST00000467681 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
SSBP1-206ENST00000467681 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
SSBP1-206ENST00000467681 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
SSBP1-206ENST00000467681 MIER1Q8N108 512 aa17.85■□□□□ 0.45
SSBP1-206ENST00000467681 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
SSBP1-206ENST00000467681 PAPPAQ13219 1627 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 CHL1O00533 1208 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 GNPATO15228 680 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 STARD3NLO95772 234 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 CRKLP46109 303 aaKnown RBP17.84■□□□□ 0.45
SSBP1-206ENST00000467681 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
SSBP1-206ENST00000467681 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
SSBP1-206ENST00000467681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.83■□□□□ 0.44
SSBP1-206ENST00000467681 SNRPA1P09661 255 aaKnown RBP17.83■□□□□ 0.44
SSBP1-206ENST00000467681 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
SSBP1-206ENST00000467681 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.44
SSBP1-206ENST00000467681 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
SSBP1-206ENST00000467681 ZBTB7AO95365 584 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 SSFA2P28290 1259 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
SSBP1-206ENST00000467681 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 SPON1Q9HCB6 807 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 CCDC87Q9NVE4 849 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
SSBP1-206ENST00000467681 MSH5O43196 834 aa17.81■□□□□ 0.44
SSBP1-206ENST00000467681 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
SSBP1-206ENST00000467681 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
SSBP1-206ENST00000467681 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-206ENST00000467681 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
SSBP1-206ENST00000467681 PHF14O94880 888 aa17.8■□□□□ 0.44
SSBP1-206ENST00000467681 ADRA2BP18089 450 aa17.8■□□□□ 0.44
SSBP1-206ENST00000467681 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
SSBP1-206ENST00000467681 CFAP44Q96MT7 982 aa17.8■□□□□ 0.44
SSBP1-206ENST00000467681 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
SSBP1-206ENST00000467681 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-206ENST00000467681 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
SSBP1-206ENST00000467681 GIGYF1O75420 1035 aaPredicted RBP17.79■□□□□ 0.44
SSBP1-206ENST00000467681 ZNF853P0CG23 659 aa17.79■□□□□ 0.44
SSBP1-206ENST00000467681 WWC1Q8IX03 1113 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms