RNA–Protein interactions for RNA: ENST00000467673.5

MACF1-211, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-211ENST00000467673 NUDCQ9Y266 331 aa28.87■■■□□ 2.21
MACF1-211ENST00000467673 ADAMTS7Q9UKP4 1686 aa28.86■■■□□ 2.21
MACF1-211ENST00000467673 HMGB2P26583 209 aaKnown RBP28.86■■■□□ 2.21
MACF1-211ENST00000467673 ITPK1Q13572 414 aa28.86■■■□□ 2.21
MACF1-211ENST00000467673 RNMTO43148 476 aaKnown RBP28.85■■■□□ 2.21
MACF1-211ENST00000467673 PHACTR3Q96KR7 559 aa28.85■■■□□ 2.21
MACF1-211ENST00000467673 C4BP0C0L5 1744 aa28.84■■■□□ 2.21
MACF1-211ENST00000467673 LINC00116Q8NCU8 138 aa28.84■■■□□ 2.21
MACF1-211ENST00000467673 SLC16A10Q8TF71 515 aa28.84■■■□□ 2.21
MACF1-211ENST00000467673 PRKAR2BP31323 418 aa28.83■■■□□ 2.21
MACF1-211ENST00000467673 RALBP1Q15311 655 aa28.83■■■□□ 2.21
MACF1-211ENST00000467673 SLC52A2Q9HAB3 445 aa28.83■■■□□ 2.21
MACF1-211ENST00000467673 U2AF1L5P0DN76 240 aaPredicted RBP28.82■■■□□ 2.2
MACF1-211ENST00000467673 ATP6V1AP38606 617 aa28.82■■■□□ 2.2
MACF1-211ENST00000467673 U2AF1Q01081 240 aaKnown RBP eCLIP28.82■■■□□ 2.2
MACF1-211ENST00000467673 AMIGO3Q86WK7 504 aa28.82■■■□□ 2.2
MACF1-211ENST00000467673 COL23A1Q86Y22 540 aaPredicted RBP28.82■■■□□ 2.2
MACF1-211ENST00000467673 MRC1P22897 1456 aa28.82■■■□□ 2.2
MACF1-211ENST00000467673 ZNF831Q5JPB2 1677 aa28.82■■■□□ 2.2
MACF1-211ENST00000467673 VIRMAQ69YN4 1812 aaKnown RBP28.82■■■□□ 2.2
MACF1-211ENST00000467673 FCHSD2O94868 740 aa28.81■■■□□ 2.2
MACF1-211ENST00000467673 COL24A1Q17RW2 1714 aa28.8■■■□□ 2.2
MACF1-211ENST00000467673 GAS2L2Q8NHY3 880 aa28.8■■■□□ 2.2
MACF1-211ENST00000467673 IL17REQ8NFR9 667 aa28.78■■■□□ 2.2
MACF1-211ENST00000467673 RBM42Q9BTD8 480 aaKnown RBP28.78■■■□□ 2.2
MACF1-211ENST00000467673 UBR3Q6ZT12 1888 aa28.78■■■□□ 2.2
MACF1-211ENST00000467673 PPP1R1BQ9UD71 204 aaPredicted RBP28.77■■■□□ 2.2
MACF1-211ENST00000467673 MAP3K5Q99683 1374 aa28.76■■■□□ 2.2
MACF1-211ENST00000467673 GNAT3A8MTJ3 354 aa28.76■■■□□ 2.19
MACF1-211ENST00000467673 SMIM5Q71RC9 77 aa28.75■■■□□ 2.19
MACF1-211ENST00000467673 FLAD1Q8NFF5 587 aa28.75■■■□□ 2.19
MACF1-211ENST00000467673 AK7Q96M32 723 aa28.75■■■□□ 2.19
MACF1-211ENST00000467673 PTCD1O75127 700 aaKnown RBP28.74■■■□□ 2.19
MACF1-211ENST00000467673 COL5A3P25940 1745 aaPredicted RBP28.72■■■□□ 2.19
MACF1-211ENST00000467673 RC3H1Q5TC82 1133 aaKnown RBP28.72■■■□□ 2.19
MACF1-211ENST00000467673 CEMIPQ8WUJ3 1361 aa28.72■■■□□ 2.19
MACF1-211ENST00000467673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.71■■■□□ 2.19
MACF1-211ENST00000467673 SSFA2P28290 1259 aa28.71■■■□□ 2.19
MACF1-211ENST00000467673 SLC39A6Q13433 755 aa28.71■■■□□ 2.19
MACF1-211ENST00000467673 ARXQ96QS3 562 aa28.7■■■□□ 2.18
MACF1-211ENST00000467673 PLEKHF1Q96S99 279 aa28.7■■■□□ 2.18
MACF1-211ENST00000467673 MYH14Q7Z406 1995 aaKnown RBP28.7■■■□□ 2.18
MACF1-211ENST00000467673 MYBBP1AQ9BQG0 1328 aaKnown RBP28.69■■■□□ 2.18
MACF1-211ENST00000467673 CICQ96RK0 1608 aaPredicted RBP28.69■■■□□ 2.18
MACF1-211ENST00000467673 MSH5O43196 834 aa28.69■■■□□ 2.18
MACF1-211ENST00000467673 CNTNAP4Q9C0A0 1308 aa28.69■■■□□ 2.18
MACF1-211ENST00000467673 GNPATO15228 680 aa28.68■■■□□ 2.18
MACF1-211ENST00000467673 SIPA1L3O60292 1781 aaPredicted RBP28.67■■■□□ 2.18
MACF1-211ENST00000467673 TJP1Q07157 1748 aa28.67■■■□□ 2.18
MACF1-211ENST00000467673 KCPQ6ZWJ8 1503 aa28.67■■■□□ 2.18
MACF1-211ENST00000467673 PHF14O94880 888 aa28.66■■■□□ 2.18
MACF1-211ENST00000467673 FHDC1Q9C0D6 1143 aaPredicted RBP28.66■■■□□ 2.18
MACF1-211ENST00000467673 PRKRIP1Q9H875 184 aaPredicted RBP28.66■■■□□ 2.18
MACF1-211ENST00000467673 SYT17Q9BSW7 474 aa28.65■■■□□ 2.18
MACF1-211ENST00000467673 POLD1P28340 1107 aa28.64■■■□□ 2.18
MACF1-211ENST00000467673 TEFQ10587 303 aa28.64■■■□□ 2.18
MACF1-211ENST00000467673 UBR2Q8IWV8 1755 aa28.64■■■□□ 2.18
MACF1-211ENST00000467673 RPS6KA4O75676 772 aa28.63■■■□□ 2.17
MACF1-211ENST00000467673 MSL1Q68DK7 614 aa28.63■■■□□ 2.17
MACF1-211ENST00000467673 HTATSF1O43719 755 aaKnown RBP28.62■■■□□ 2.17
MACF1-211ENST00000467673 CRKLP46109 303 aaKnown RBP28.62■■■□□ 2.17
MACF1-211ENST00000467673 DNAJC10Q8IXB1 793 aa28.62■■■□□ 2.17
MACF1-211ENST00000467673 RTCBQ9Y3I0 505 aaKnown RBP28.62■■■□□ 2.17
MACF1-211ENST00000467673 INTS5Q6P9B9 1019 aaKnown RBP28.61■■■□□ 2.17
MACF1-211ENST00000467673 VSIG10Q8N0Z9 540 aa28.61■■■□□ 2.17
MACF1-211ENST00000467673 ZNF316A6NFI3 1004 aaPredicted RBP28.6■■■□□ 2.17
MACF1-211ENST00000467673 ZNF790Q6PG37 636 aa28.6■■■□□ 2.17
MACF1-211ENST00000467673 MCM10Q7L590 875 aa28.6■■■□□ 2.17
MACF1-211ENST00000467673 CYP19A1P11511 503 aaPredicted RBP28.59■■■□□ 2.17
MACF1-211ENST00000467673 TRAPPC3LQ5T215 181 aa28.59■■■□□ 2.17
MACF1-211ENST00000467673 ARHGEF1Q92888 912 aaKnown RBP28.59■■■□□ 2.17
MACF1-211ENST00000467673 UTRNP46939 3433 aa28.59■■■□□ 2.17
MACF1-211ENST00000467673 ADRA2BP18089 450 aa28.58■■■□□ 2.17
MACF1-211ENST00000467673 DCTN1Q14203 1278 aa28.58■■■□□ 2.17
MACF1-211ENST00000467673 ZNF496Q96IT1 587 aaPredicted RBP28.58■■■□□ 2.17
MACF1-211ENST00000467673 RTF1Q92541 710 aaKnown RBP28.57■■■□□ 2.16
MACF1-211ENST00000467673 KCNQ3O43525 872 aa28.56■■■□□ 2.16
MACF1-211ENST00000467673 NFE2L2Q16236 605 aa28.56■■■□□ 2.16
MACF1-211ENST00000467673 DLG5Q8TDM6 1919 aa28.56■■■□□ 2.16
MACF1-211ENST00000467673 PNNQ9H307 717 aaKnown RBP28.56■■■□□ 2.16
MACF1-211ENST00000467673 TTC5Q8N0Z6 440 aa28.55■■■□□ 2.16
MACF1-211ENST00000467673 BTBD11A6QL63 1104 aa28.54■■■□□ 2.16
MACF1-211ENST00000467673 CCDC87Q9NVE4 849 aa28.54■■■□□ 2.16
MACF1-211ENST00000467673 GOLGB1Q14789 3259 aaKnown RBP28.54■■■□□ 2.16
MACF1-211ENST00000467673 HEG1Q9ULI3 1381 aa28.53■■■□□ 2.16
MACF1-211ENST00000467673 NEFMP07197 916 aa28.53■■■□□ 2.16
MACF1-211ENST00000467673 C4AP0C0L4 1744 aa28.51■■■□□ 2.15
MACF1-211ENST00000467673 GYS1P13807 737 aa28.5■■■□□ 2.15
MACF1-211ENST00000467673 RFC4P35249 363 aa28.5■■■□□ 2.15
MACF1-211ENST00000467673 SOS1Q07889 1333 aaPredicted RBP28.49■■■□□ 2.15
MACF1-211ENST00000467673 TAF7Q15545 349 aaPredicted RBP28.49■■■□□ 2.15
MACF1-211ENST00000467673 FMNL2Q96PY5 1086 aa28.49■■■□□ 2.15
MACF1-211ENST00000467673 ZBTB1Q9Y2K1 713 aa28.49■■■□□ 2.15
MACF1-211ENST00000467673 MAPK8IP3Q9UPT6 1336 aa28.48■■■□□ 2.15
MACF1-211ENST00000467673 NLGN1Q8N2Q7 840 aa28.48■■■□□ 2.15
MACF1-211ENST00000467673 NLGN2Q8NFZ4 835 aa28.47■■■□□ 2.15
MACF1-211ENST00000467673 TEX13AQ9BXU3 409 aaPredicted RBP28.47■■■□□ 2.15
MACF1-211ENST00000467673 ADAMTS8Q9UP79 889 aa28.47■■■□□ 2.15
MACF1-211ENST00000467673 STARD3NLO95772 234 aa28.46■■■□□ 2.15
MACF1-211ENST00000467673 SRP68Q9UHB9 627 aaKnown RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms