RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SLC35F4A4IF30 521 aa7.78□□□□□ -1.16
SMC4-208ENST00000467468 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
SMC4-208ENST00000467468 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
SMC4-208ENST00000467468 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
SMC4-208ENST00000467468 RHOQP17081 205 aa7.77□□□□□ -1.17
SMC4-208ENST00000467468 VEGFBP49765 207 aa7.77□□□□□ -1.17
SMC4-208ENST00000467468 LARGE2Q8N3Y3 721 aa7.77□□□□□ -1.17
SMC4-208ENST00000467468 FHDC1Q9C0D6 1143 aaPredicted RBP7.77□□□□□ -1.17
SMC4-208ENST00000467468 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
SMC4-208ENST00000467468 HRH3Q9Y5N1 445 aa7.77□□□□□ -1.17
SMC4-208ENST00000467468 LMOD1P29536 600 aaPredicted RBP7.76□□□□□ -1.17
SMC4-208ENST00000467468 POU4F2Q12837 409 aa7.76□□□□□ -1.17
SMC4-208ENST00000467468 LARP1Q6PKG0 1096 aaKnown RBP7.76□□□□□ -1.17
SMC4-208ENST00000467468 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
SMC4-208ENST00000467468 TPCN2Q8NHX9 752 aa7.76□□□□□ -1.17
SMC4-208ENST00000467468 RHBDD1Q8TEB9 315 aa7.76□□□□□ -1.17
SMC4-208ENST00000467468 CCDC97Q96F63 343 aaPredicted RBP7.76□□□□□ -1.17
SMC4-208ENST00000467468 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
SMC4-208ENST00000467468 DYRK1BQ9Y463 629 aa7.76□□□□□ -1.17
SMC4-208ENST00000467468 TMEM229AB2RXF0 380 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 STAU1O95793 577 aaKnown RBP7.75□□□□□ -1.17
SMC4-208ENST00000467468 RASA1P20936 1047 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 ITGA6P23229 1130 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 SMTNP53814 917 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 CCDC102BQ68D86 513 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
SMC4-208ENST00000467468 SLC4A9Q96Q91 983 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 SERTAD1Q9UHV2 236 aa7.75□□□□□ -1.17
SMC4-208ENST00000467468 SENP3-EIF4A1A0A087X0R7 540 aa7.74□□□□□ -1.17
SMC4-208ENST00000467468 VSIG8P0DPA2 414 aa7.74□□□□□ -1.17
SMC4-208ENST00000467468 CLDN10P78369 228 aa7.74□□□□□ -1.17
SMC4-208ENST00000467468 GMCL1Q96IK5 515 aa7.74□□□□□ -1.17
SMC4-208ENST00000467468 VRTNQ9H8Y1 702 aa7.74□□□□□ -1.17
SMC4-208ENST00000467468 ZNF358Q9NW07 568 aa7.74□□□□□ -1.17
SMC4-208ENST00000467468 A0A1B0GTH6 734 aa7.73□□□□□ -1.17
SMC4-208ENST00000467468 A6NJY4 79 aa7.73□□□□□ -1.17
SMC4-208ENST00000467468 H7C1W4 665 aa7.73□□□□□ -1.17
SMC4-208ENST00000467468 SIX5Q8N196 739 aa7.73□□□□□ -1.17
SMC4-208ENST00000467468 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC4-208ENST00000467468 ZNF594Q96JF6 807 aaPredicted RBP7.73□□□□□ -1.17
SMC4-208ENST00000467468 NIFKQ9BYG3 293 aaKnown RBP7.73□□□□□ -1.17
SMC4-208ENST00000467468 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
SMC4-208ENST00000467468 SERPINA10Q9UK55 444 aa7.73□□□□□ -1.17
SMC4-208ENST00000467468 CDC14CA4D256 554 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 M0R2N6 131 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 CDK2AP1O14519 115 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 MTFR1Q15390 333 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 C4orf17Q53FE4 359 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 RIPOR1Q6ZS17 1223 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 SV2AQ7L0J3 742 aa7.72□□□□□ -1.17
SMC4-208ENST00000467468 NANOS1Q8WY41 292 aaKnown RBP7.72□□□□□ -1.17
SMC4-208ENST00000467468 GAS2L1Q99501 681 aaPredicted RBP7.72□□□□□ -1.17
SMC4-208ENST00000467468 FAM196BA6NMK8 535 aa7.71□□□□□ -1.18
SMC4-208ENST00000467468 PHKA2P46019 1235 aa7.71□□□□□ -1.18
SMC4-208ENST00000467468 CFAP70Q5T0N1 1121 aa7.71□□□□□ -1.18
SMC4-208ENST00000467468 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
SMC4-208ENST00000467468 FOXR1Q6PIV2 292 aa7.71□□□□□ -1.18
SMC4-208ENST00000467468 KIAA1024Q9UPX6 916 aa7.71□□□□□ -1.18
SMC4-208ENST00000467468 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L12C9JPN9 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L21D6R901 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
SMC4-208ENST00000467468 F11P03951 625 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 CSB-PGBD3P0DP91 1061 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 PLA2G4AP47712 749 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 SEC13P55735 322 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 PGBD3Q8N328 593 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 C1orf216Q8TAB5 229 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 SCHIP1Q9P0W5 487 aaPredicted RBP7.7□□□□□ -1.18
SMC4-208ENST00000467468 CHMP3Q9Y3E7 222 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
SMC4-208ENST00000467468 WIPF1O43516 503 aa7.69□□□□□ -1.18
SMC4-208ENST00000467468 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
SMC4-208ENST00000467468 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
SMC4-208ENST00000467468 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
SMC4-208ENST00000467468 RFX1P22670 979 aa7.68□□□□□ -1.18
SMC4-208ENST00000467468 GMPRP36959 345 aa7.68□□□□□ -1.18
SMC4-208ENST00000467468 INSM1Q01101 510 aaPredicted RBP7.68□□□□□ -1.18
SMC4-208ENST00000467468 LBRQ14739 615 aaKnown RBP7.68□□□□□ -1.18
SMC4-208ENST00000467468 NUCKS1Q9H1E3 243 aaKnown RBP7.68□□□□□ -1.18
SMC4-208ENST00000467468 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
SMC4-208ENST00000467468 ARID3CA6NKF2 412 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 TATP17735 454 aaPredicted RBP7.67□□□□□ -1.18
SMC4-208ENST00000467468 PTK7Q13308 1070 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 CRTC2Q53ET0 693 aaPredicted RBP7.67□□□□□ -1.18
SMC4-208ENST00000467468 EFHC2Q5JST6 749 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 ANKMY2Q8IV38 441 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 SLC9A9Q8IVB4 645 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 TNS4Q8IZW8 715 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms