RNA–Protein interactions for RNA: ENST00000467463.1

PLXNA3-202, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 384 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-202ENST00000467463 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
PLXNA3-202ENST00000467463 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
PLXNA3-202ENST00000467463 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
PLXNA3-202ENST00000467463 SIK1P57059 783 aa13.36□□□□□ -0.27
PLXNA3-202ENST00000467463 CABP4P57796 275 aa13.35□□□□□ -0.27
PLXNA3-202ENST00000467463 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
PLXNA3-202ENST00000467463 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
PLXNA3-202ENST00000467463 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
PLXNA3-202ENST00000467463 ITPK1Q13572 414 aa13.34□□□□□ -0.27
PLXNA3-202ENST00000467463 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
PLXNA3-202ENST00000467463 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
PLXNA3-202ENST00000467463 HSPA6P17066 643 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 ATP6V1AP38606 617 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 DDX10Q13206 875 aaKnown RBP13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 SMIM5Q71RC9 77 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 NLGN2Q8NFZ4 835 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 SLC4A9Q96Q91 983 aa13.33□□□□□ -0.28
PLXNA3-202ENST00000467463 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
PLXNA3-202ENST00000467463 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
PLXNA3-202ENST00000467463 MSH5O43196 834 aa13.32□□□□□ -0.28
PLXNA3-202ENST00000467463 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
PLXNA3-202ENST00000467463 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
PLXNA3-202ENST00000467463 YBX3P16989 372 aaKnown RBP eCLIP13.31□□□□□ -0.28
PLXNA3-202ENST00000467463 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
PLXNA3-202ENST00000467463 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
PLXNA3-202ENST00000467463 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 AK7Q96M32 723 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 SLC52A2Q9HAB3 445 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 C5P01031 1676 aa13.3□□□□□ -0.28
PLXNA3-202ENST00000467463 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 PTCD1O75127 700 aaKnown RBP13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 U2AF1L5P0DN76 240 aaPredicted RBP13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 POLD1P28340 1107 aa13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 U2AF1Q01081 240 aaKnown RBP eCLIP13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 COL24A1Q17RW2 1714 aa13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
PLXNA3-202ENST00000467463 C4BP0C0L5 1744 aa13.28□□□□□ -0.28
PLXNA3-202ENST00000467463 PHF14O94880 888 aa13.28□□□□□ -0.28
PLXNA3-202ENST00000467463 FLAD1Q8NFF5 587 aa13.28□□□□□ -0.28
PLXNA3-202ENST00000467463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
PLXNA3-202ENST00000467463 CAPN15O75808 1086 aa13.27□□□□□ -0.29
PLXNA3-202ENST00000467463 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
PLXNA3-202ENST00000467463 MSL1Q68DK7 614 aa13.27□□□□□ -0.29
PLXNA3-202ENST00000467463 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
PLXNA3-202ENST00000467463 GAS2L2Q8NHY3 880 aa13.27□□□□□ -0.29
PLXNA3-202ENST00000467463 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
PLXNA3-202ENST00000467463 GNPATO15228 680 aa13.26□□□□□ -0.29
PLXNA3-202ENST00000467463 GRIN3BO60391 1043 aa13.26□□□□□ -0.29
PLXNA3-202ENST00000467463 FCHSD2O94868 740 aa13.26□□□□□ -0.29
PLXNA3-202ENST00000467463 SSFA2P28290 1259 aa13.26□□□□□ -0.29
PLXNA3-202ENST00000467463 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
PLXNA3-202ENST00000467463 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
PLXNA3-202ENST00000467463 RALBP1Q15311 655 aa13.25□□□□□ -0.29
PLXNA3-202ENST00000467463 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
PLXNA3-202ENST00000467463 MRC1P22897 1456 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 UBR3Q6ZT12 1888 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 TRAPPC3LQ5T215 181 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 DNAJC10Q8IXB1 793 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 ADAMTS7Q9UKP4 1686 aa13.23□□□□□ -0.29
PLXNA3-202ENST00000467463 CRKLP46109 303 aaKnown RBP13.22□□□□□ -0.29
PLXNA3-202ENST00000467463 TEFQ10587 303 aa13.22□□□□□ -0.29
PLXNA3-202ENST00000467463 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
PLXNA3-202ENST00000467463 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
PLXNA3-202ENST00000467463 MCM10Q7L590 875 aa13.21□□□□□ -0.29
PLXNA3-202ENST00000467463 PLEKHF1Q96S99 279 aa13.21□□□□□ -0.29
PLXNA3-202ENST00000467463 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
PLXNA3-202ENST00000467463 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
PLXNA3-202ENST00000467463 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
PLXNA3-202ENST00000467463 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
PLXNA3-202ENST00000467463 ADCY9O60503 1353 aa13.2□□□□□ -0.3
PLXNA3-202ENST00000467463 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 VIRMAQ69YN4 1812 aaKnown RBP13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 KCNQ3O43525 872 aa13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 CYP19A1P11511 503 aaPredicted RBP13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 COL13A1Q5TAT6 717 aaPredicted RBP13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
PLXNA3-202ENST00000467463 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 GYS1P13807 737 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 ADRA2BP18089 450 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 TTC5Q8N0Z6 440 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 TJP1Q07157 1748 aa13.18□□□□□ -0.3
PLXNA3-202ENST00000467463 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
PLXNA3-202ENST00000467463 RFC4P35249 363 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms