RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 KCNQ3O43525 872 aa14.23□□□□□ -0.13
HPS1-208ENST00000467246 GSPT1P15170 499 aaKnown RBP14.23□□□□□ -0.13
HPS1-208ENST00000467246 HDGFL1Q5TGJ6 251 aa14.23□□□□□ -0.13
HPS1-208ENST00000467246 TBC1D9Q6ZT07 1266 aa14.23□□□□□ -0.13
HPS1-208ENST00000467246 PHRF1Q9P1Y6 1649 aaKnown RBP14.23□□□□□ -0.13
HPS1-208ENST00000467246 ZC3H6P61129 1189 aaKnown RBP14.23□□□□□ -0.13
HPS1-208ENST00000467246 PLEKHO1Q53GL0 409 aaPredicted RBP14.23□□□□□ -0.13
HPS1-208ENST00000467246 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
HPS1-208ENST00000467246 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
HPS1-208ENST00000467246 EIF2S2P20042 333 aaKnown RBP14.22□□□□□ -0.13
HPS1-208ENST00000467246 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
HPS1-208ENST00000467246 SOS1Q07889 1333 aaPredicted RBP14.22□□□□□ -0.13
HPS1-208ENST00000467246 TMEM94Q12767 1356 aa14.22□□□□□ -0.13
HPS1-208ENST00000467246 FAM208AQ9UK61 1670 aaKnown RBP14.22□□□□□ -0.13
HPS1-208ENST00000467246 GNAI2P04899 355 aa14.22□□□□□ -0.13
HPS1-208ENST00000467246 ATF3P18847 181 aa14.22□□□□□ -0.13
HPS1-208ENST00000467246 TRPM3Q9HCF6 1732 aaPredicted RBP14.22□□□□□ -0.13
HPS1-208ENST00000467246 FRAT2O75474 233 aaPredicted RBP14.21□□□□□ -0.13
HPS1-208ENST00000467246 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
HPS1-208ENST00000467246 TEFQ10587 303 aa14.21□□□□□ -0.13
HPS1-208ENST00000467246 AMOTQ4VCS5 1084 aa14.21□□□□□ -0.14
HPS1-208ENST00000467246 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.14
HPS1-208ENST00000467246 PXDNQ92626 1479 aa14.2□□□□□ -0.14
HPS1-208ENST00000467246 BTBD11A6QL63 1104 aa14.2□□□□□ -0.14
HPS1-208ENST00000467246 HMMRO75330 724 aa14.2□□□□□ -0.14
HPS1-208ENST00000467246 ANTXR1Q9H6X2 564 aa14.2□□□□□ -0.14
HPS1-208ENST00000467246 TTC22Q5TAA0 569 aa14.2□□□□□ -0.14
HPS1-208ENST00000467246 MED1Q15648 1581 aaPredicted RBP14.2□□□□□ -0.14
HPS1-208ENST00000467246 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
HPS1-208ENST00000467246 HSPA2P54652 639 aa14.19□□□□□ -0.14
HPS1-208ENST00000467246 C1orf141Q5JVX7 400 aa14.19□□□□□ -0.14
HPS1-208ENST00000467246 MST1RQ04912 1400 aa14.19□□□□□ -0.14
HPS1-208ENST00000467246 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
HPS1-208ENST00000467246 CDC45O75419 566 aa14.19□□□□□ -0.14
HPS1-208ENST00000467246 CHPF2Q9P2E5 772 aa14.19□□□□□ -0.14
HPS1-208ENST00000467246 GNAI3P08754 354 aa14.18□□□□□ -0.14
HPS1-208ENST00000467246 USP44Q9H0E7 712 aa14.18□□□□□ -0.14
HPS1-208ENST00000467246 EXOC6BQ9Y2D4 811 aa14.18□□□□□ -0.14
HPS1-208ENST00000467246 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
HPS1-208ENST00000467246 ANXA1P04083 346 aa14.18□□□□□ -0.14
HPS1-208ENST00000467246 ERBB3P21860 1342 aa14.18□□□□□ -0.14
HPS1-208ENST00000467246 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
HPS1-208ENST00000467246 CABLES1Q8TDN4 633 aa14.17□□□□□ -0.14
HPS1-208ENST00000467246 KIF2CQ99661 725 aa14.17□□□□□ -0.14
HPS1-208ENST00000467246 LRRFIP2Q9Y608 721 aaKnown RBP14.17□□□□□ -0.14
HPS1-208ENST00000467246 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
HPS1-208ENST00000467246 LMO7Q8WWI1 1683 aa14.16□□□□□ -0.14
HPS1-208ENST00000467246 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
HPS1-208ENST00000467246 CACNA1FO60840 1977 aa14.16□□□□□ -0.14
HPS1-208ENST00000467246 HOXB7P09629 217 aa14.16□□□□□ -0.14
HPS1-208ENST00000467246 SDSP20132 328 aa14.16□□□□□ -0.14
HPS1-208ENST00000467246 KDM3BQ7LBC6 1761 aa14.15□□□□□ -0.14
HPS1-208ENST00000467246 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
HPS1-208ENST00000467246 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
HPS1-208ENST00000467246 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
HPS1-208ENST00000467246 PRAMEF22A3QJZ6 481 aa14.14□□□□□ -0.15
HPS1-208ENST00000467246 PI4KAP2A4QPH2 592 aa14.14□□□□□ -0.15
HPS1-208ENST00000467246 UBTFL1P0CB47 393 aaPredicted RBP14.14□□□□□ -0.15
HPS1-208ENST00000467246 HSCBQ8IWL3 235 aa14.14□□□□□ -0.15
HPS1-208ENST00000467246 PI4KAP1Q8N8J0 262 aa14.14□□□□□ -0.15
HPS1-208ENST00000467246 SRCIN1Q9C0H9 1055 aa14.14□□□□□ -0.15
HPS1-208ENST00000467246 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
HPS1-208ENST00000467246 GIGYF1O75420 1035 aaPredicted RBP14.13□□□□□ -0.15
HPS1-208ENST00000467246 CADPS2Q86UW7 1296 aa14.13□□□□□ -0.15
HPS1-208ENST00000467246 PDE1AP54750 535 aa14.13□□□□□ -0.15
HPS1-208ENST00000467246 CHRNA2Q15822 529 aa14.13□□□□□ -0.15
HPS1-208ENST00000467246 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
HPS1-208ENST00000467246 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
HPS1-208ENST00000467246 DCCP43146 1447 aa14.13□□□□□ -0.15
HPS1-208ENST00000467246 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 LRRCC1Q9C099 1032 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 CAMTA1Q9Y6Y1 1673 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 NPHP3Q7Z494 1330 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
HPS1-208ENST00000467246 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 SNX21Q969T3 373 aa14.12□□□□□ -0.15
HPS1-208ENST00000467246 CD2BP2O95400 341 aaKnown RBP14.11□□□□□ -0.15
HPS1-208ENST00000467246 OSBPL3Q9H4L5 887 aa14.11□□□□□ -0.15
HPS1-208ENST00000467246 DBF4Q9UBU7 674 aaPredicted RBP14.11□□□□□ -0.15
HPS1-208ENST00000467246 IBTKQ9P2D0 1353 aaPredicted RBP14.11□□□□□ -0.15
HPS1-208ENST00000467246 CHMP4AQ9BY43 222 aa14.11□□□□□ -0.15
HPS1-208ENST00000467246 ADCY9O60503 1353 aa14.11□□□□□ -0.15
HPS1-208ENST00000467246 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
HPS1-208ENST00000467246 OVOS2A0A0G2JMS6 1433 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 NCOA3Q9Y6Q9 1424 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 SALL3Q9BXA9 1300 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 PPP1R42Q7Z4L9 355 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 SLC39A6Q13433 755 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 SSH3Q8TE77 659 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 USP26Q9BXU7 913 aa14.1□□□□□ -0.15
HPS1-208ENST00000467246 GSE1Q14687 1217 aa14.09□□□□□ -0.15
HPS1-208ENST00000467246 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
HPS1-208ENST00000467246 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
HPS1-208ENST00000467246 TATP17735 454 aaPredicted RBP14.09□□□□□ -0.15
HPS1-208ENST00000467246 SPATA31A3Q5VYP0 1347 aa14.09□□□□□ -0.15
HPS1-208ENST00000467246 PHKG2P15735 406 aa14.08□□□□□ -0.16
HPS1-208ENST00000467246 MAP3K2Q9Y2U5 619 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms