RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 IFT57Q9NWB7 429 aa13.98□□□□□ -0.17
NUP188-204ENST00000467044 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
NUP188-204ENST00000467044 BTBD11A6QL63 1104 aa13.97□□□□□ -0.17
NUP188-204ENST00000467044 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
NUP188-204ENST00000467044 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
NUP188-204ENST00000467044 ADAMTS7Q9UKP4 1686 aa13.97□□□□□ -0.17
NUP188-204ENST00000467044 CHL1O00533 1208 aa13.96□□□□□ -0.17
NUP188-204ENST00000467044 ZNF853P0CG23 659 aa13.96□□□□□ -0.17
NUP188-204ENST00000467044 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
NUP188-204ENST00000467044 RGS12O14924 1447 aa13.96□□□□□ -0.18
NUP188-204ENST00000467044 ITGB4P16144 1822 aa13.95□□□□□ -0.18
NUP188-204ENST00000467044 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
NUP188-204ENST00000467044 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
NUP188-204ENST00000467044 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
NUP188-204ENST00000467044 FANCIQ9NVI1 1328 aa13.94□□□□□ -0.18
NUP188-204ENST00000467044 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
NUP188-204ENST00000467044 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
NUP188-204ENST00000467044 FAM196AQ6ZSG2 479 aa13.94□□□□□ -0.18
NUP188-204ENST00000467044 TRMT2AQ8IZ69 625 aaKnown RBP13.94□□□□□ -0.18
NUP188-204ENST00000467044 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
NUP188-204ENST00000467044 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
NUP188-204ENST00000467044 KCNQ2O43526 872 aa13.93□□□□□ -0.18
NUP188-204ENST00000467044 PIGBQ92521 554 aa13.93□□□□□ -0.18
NUP188-204ENST00000467044 MRC1P22897 1456 aa13.93□□□□□ -0.18
NUP188-204ENST00000467044 KCNQ3O43525 872 aa13.92□□□□□ -0.18
NUP188-204ENST00000467044 CENPBP07199 599 aaPredicted RBP13.92□□□□□ -0.18
NUP188-204ENST00000467044 EXOSC9Q06265 439 aaKnown RBP13.92□□□□□ -0.18
NUP188-204ENST00000467044 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
NUP188-204ENST00000467044 ZNF790Q6PG37 636 aa13.91□□□□□ -0.18
NUP188-204ENST00000467044 BCL9O00512 1426 aa13.9□□□□□ -0.18
NUP188-204ENST00000467044 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
NUP188-204ENST00000467044 ASAP1Q9ULH1 1129 aa13.9□□□□□ -0.18
NUP188-204ENST00000467044 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
NUP188-204ENST00000467044 SBF2Q86WG5 1849 aa13.9□□□□□ -0.18
NUP188-204ENST00000467044 TRIM37O94972 964 aa13.89□□□□□ -0.19
NUP188-204ENST00000467044 EIF4A1P60842 406 aaKnown RBP13.89□□□□□ -0.19
NUP188-204ENST00000467044 KRT24Q2M2I5 525 aa13.89□□□□□ -0.19
NUP188-204ENST00000467044 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
NUP188-204ENST00000467044 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
NUP188-204ENST00000467044 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
NUP188-204ENST00000467044 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
NUP188-204ENST00000467044 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
NUP188-204ENST00000467044 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
NUP188-204ENST00000467044 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
NUP188-204ENST00000467044 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
NUP188-204ENST00000467044 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
NUP188-204ENST00000467044 BCL11BQ9C0K0 894 aaPredicted RBP13.87□□□□□ -0.19
NUP188-204ENST00000467044 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
NUP188-204ENST00000467044 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
NUP188-204ENST00000467044 BTAF1O14981 1849 aa13.85□□□□□ -0.19
NUP188-204ENST00000467044 VAMP4O75379 141 aa13.85□□□□□ -0.19
NUP188-204ENST00000467044 PAPPAQ13219 1627 aa13.85□□□□□ -0.19
NUP188-204ENST00000467044 GIGYF1O75420 1035 aaPredicted RBP13.84□□□□□ -0.19
NUP188-204ENST00000467044 SNRPA1P09661 255 aaKnown RBP13.84□□□□□ -0.19
NUP188-204ENST00000467044 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
NUP188-204ENST00000467044 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
NUP188-204ENST00000467044 PALLDQ8WX93 1383 aa13.83□□□□□ -0.19
NUP188-204ENST00000467044 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.19
NUP188-204ENST00000467044 PRAMEF22A3QJZ6 481 aa13.83□□□□□ -0.2
NUP188-204ENST00000467044 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
NUP188-204ENST00000467044 CT47B1P0C2W7 299 aaPredicted RBP13.83□□□□□ -0.2
NUP188-204ENST00000467044 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
NUP188-204ENST00000467044 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.2
NUP188-204ENST00000467044 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
NUP188-204ENST00000467044 APBA3O96018 575 aa13.82□□□□□ -0.2
NUP188-204ENST00000467044 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
NUP188-204ENST00000467044 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
NUP188-204ENST00000467044 HOXB7P09629 217 aa13.81□□□□□ -0.2
NUP188-204ENST00000467044 SIK1P57059 783 aa13.81□□□□□ -0.2
NUP188-204ENST00000467044 HDGFL1Q5TGJ6 251 aa13.81□□□□□ -0.2
NUP188-204ENST00000467044 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
NUP188-204ENST00000467044 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
NUP188-204ENST00000467044 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
NUP188-204ENST00000467044 RARSP54136 660 aaKnown RBP13.8□□□□□ -0.2
NUP188-204ENST00000467044 CCDC30Q5VVM6 783 aa13.8□□□□□ -0.2
NUP188-204ENST00000467044 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
NUP188-204ENST00000467044 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
NUP188-204ENST00000467044 BCL2L13Q9BXK5 485 aa13.8□□□□□ -0.2
NUP188-204ENST00000467044 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
NUP188-204ENST00000467044 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
NUP188-204ENST00000467044 C5P01031 1676 aa13.79□□□□□ -0.2
NUP188-204ENST00000467044 KCNQ4P56696 695 aa13.79□□□□□ -0.2
NUP188-204ENST00000467044 SF3B2Q13435 895 aaKnown RBP13.79□□□□□ -0.2
NUP188-204ENST00000467044 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
NUP188-204ENST00000467044 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
NUP188-204ENST00000467044 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
NUP188-204ENST00000467044 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
NUP188-204ENST00000467044 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
NUP188-204ENST00000467044 BCAR3O75815 825 aa13.78□□□□□ -0.2
NUP188-204ENST00000467044 STARD3NLO95772 234 aa13.78□□□□□ -0.2
NUP188-204ENST00000467044 ALDH1L2Q3SY69 923 aa13.78□□□□□ -0.2
NUP188-204ENST00000467044 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
NUP188-204ENST00000467044 ITPK1Q13572 414 aa13.77□□□□□ -0.21
NUP188-204ENST00000467044 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
NUP188-204ENST00000467044 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
NUP188-204ENST00000467044 LAMB4A4D0S4 1761 aa13.76□□□□□ -0.21
NUP188-204ENST00000467044 LY75O60449 1722 aa13.76□□□□□ -0.21
NUP188-204ENST00000467044 PLSCR1O15162 318 aa13.76□□□□□ -0.21
NUP188-204ENST00000467044 ANXA1P04083 346 aa13.76□□□□□ -0.21
NUP188-204ENST00000467044 A1BGP04217 495 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms