RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 BTAF1O14981 1849 aa17.22■□□□□ 0.35
SEC22A-203ENST00000466950 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
SEC22A-203ENST00000466950 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
SEC22A-203ENST00000466950 LGR6Q9HBX8 967 aa17.22■□□□□ 0.35
SEC22A-203ENST00000466950 RXRBP28702 533 aa17.21■□□□□ 0.35
SEC22A-203ENST00000466950 TEFQ10587 303 aa17.21■□□□□ 0.35
SEC22A-203ENST00000466950 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
SEC22A-203ENST00000466950 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
SEC22A-203ENST00000466950 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
SEC22A-203ENST00000466950 A0A0G2JS52 829 aa17.2■□□□□ 0.34
SEC22A-203ENST00000466950 CHL1O00533 1208 aa17.2■□□□□ 0.34
SEC22A-203ENST00000466950 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SEC22A-203ENST00000466950 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
SEC22A-203ENST00000466950 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
SEC22A-203ENST00000466950 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
SEC22A-203ENST00000466950 TAF7Q15545 349 aaPredicted RBP17.19■□□□□ 0.34
SEC22A-203ENST00000466950 CDCA7LQ96GN5 454 aa17.19■□□□□ 0.34
SEC22A-203ENST00000466950 C5P01031 1676 aa17.18■□□□□ 0.34
SEC22A-203ENST00000466950 POTEAQ6S8J7 498 aa17.18■□□□□ 0.34
SEC22A-203ENST00000466950 LY75O60449 1722 aa17.17■□□□□ 0.34
SEC22A-203ENST00000466950 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
SEC22A-203ENST00000466950 KCPQ6ZWJ8 1503 aa17.16■□□□□ 0.34
SEC22A-203ENST00000466950 RGPD3A6NKT7 1758 aaPredicted RBP17.16■□□□□ 0.34
SEC22A-203ENST00000466950 RGPD4Q7Z3J3 1758 aa17.16■□□□□ 0.34
SEC22A-203ENST00000466950 CABP4P57796 275 aa17.16■□□□□ 0.34
SEC22A-203ENST00000466950 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
SEC22A-203ENST00000466950 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
SEC22A-203ENST00000466950 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
SEC22A-203ENST00000466950 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
SEC22A-203ENST00000466950 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
SEC22A-203ENST00000466950 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
SEC22A-203ENST00000466950 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
SEC22A-203ENST00000466950 TMOD3Q9NYL9 352 aa17.14■□□□□ 0.33
SEC22A-203ENST00000466950 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
SEC22A-203ENST00000466950 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
SEC22A-203ENST00000466950 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
SEC22A-203ENST00000466950 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
SEC22A-203ENST00000466950 TJP1Q07157 1748 aa17.13■□□□□ 0.33
SEC22A-203ENST00000466950 COL5A3P25940 1745 aaPredicted RBP17.12■□□□□ 0.33
SEC22A-203ENST00000466950 EP400Q96L91 3159 aa17.11■□□□□ 0.33
SEC22A-203ENST00000466950 ZNF790Q6PG37 636 aa17.11■□□□□ 0.33
SEC22A-203ENST00000466950 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
SEC22A-203ENST00000466950 TAF1LQ8IZX4 1826 aa17.11■□□□□ 0.33
SEC22A-203ENST00000466950 HOXB7P09629 217 aa17.1■□□□□ 0.33
SEC22A-203ENST00000466950 ZNF428Q96B54 188 aa17.1■□□□□ 0.33
SEC22A-203ENST00000466950 PRIM1P49642 420 aaKnown RBP17.09■□□□□ 0.33
SEC22A-203ENST00000466950 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
SEC22A-203ENST00000466950 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
SEC22A-203ENST00000466950 PIGBQ92521 554 aa17.09■□□□□ 0.33
SEC22A-203ENST00000466950 RREB1Q92766 1687 aa17.09■□□□□ 0.33
SEC22A-203ENST00000466950 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.32
SEC22A-203ENST00000466950 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
SEC22A-203ENST00000466950 ACSBG1Q96GR2 724 aa17.06■□□□□ 0.32
SEC22A-203ENST00000466950 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
SEC22A-203ENST00000466950 N4BP2Q86UW6 1770 aaPredicted RBP17.05■□□□□ 0.32
SEC22A-203ENST00000466950 KCNQ3O43525 872 aa17.05■□□□□ 0.32
SEC22A-203ENST00000466950 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
SEC22A-203ENST00000466950 TWISTNBQ3B726 338 aaPredicted RBP17.05■□□□□ 0.32
SEC22A-203ENST00000466950 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
SEC22A-203ENST00000466950 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
SEC22A-203ENST00000466950 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
SEC22A-203ENST00000466950 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
SEC22A-203ENST00000466950 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
SEC22A-203ENST00000466950 C8orf58Q8NAV2 365 aa17.04■□□□□ 0.32
SEC22A-203ENST00000466950 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
SEC22A-203ENST00000466950 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
SEC22A-203ENST00000466950 KCNQ2O43526 872 aa17.03■□□□□ 0.32
SEC22A-203ENST00000466950 VAMP4O75379 141 aa17.03■□□□□ 0.32
SEC22A-203ENST00000466950 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
SEC22A-203ENST00000466950 FAM182BQ5T319 152 aa17.03■□□□□ 0.32
SEC22A-203ENST00000466950 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
SEC22A-203ENST00000466950 ZNF496Q96IT1 587 aaPredicted RBP17.03■□□□□ 0.32
SEC22A-203ENST00000466950 ASAP1Q9ULH1 1129 aa17.03■□□□□ 0.32
SEC22A-203ENST00000466950 ALDH1L2Q3SY69 923 aa17.02■□□□□ 0.32
SEC22A-203ENST00000466950 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
SEC22A-203ENST00000466950 MYH14Q7Z406 1995 aaKnown RBP17.01■□□□□ 0.31
SEC22A-203ENST00000466950 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
SEC22A-203ENST00000466950 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
SEC22A-203ENST00000466950 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
SEC22A-203ENST00000466950 BRPF1P55201 1214 aaPredicted RBP17■□□□□ 0.31
SEC22A-203ENST00000466950 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
SEC22A-203ENST00000466950 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
SEC22A-203ENST00000466950 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
SEC22A-203ENST00000466950 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
SEC22A-203ENST00000466950 C4BP0C0L5 1744 aa16.97■□□□□ 0.31
SEC22A-203ENST00000466950 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
SEC22A-203ENST00000466950 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
SEC22A-203ENST00000466950 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
SEC22A-203ENST00000466950 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 NUP188Q5SRE5 1749 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 LOC102724428A0A0B4J2F2 783 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 TRIM37O94972 964 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 SIK1P57059 783 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 PTF1AQ7RTS3 328 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
SEC22A-203ENST00000466950 ARFGEF2Q9Y6D5 1785 aa16.95■□□□□ 0.3
SEC22A-203ENST00000466950 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
SEC22A-203ENST00000466950 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
SEC22A-203ENST00000466950 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms